ViewGene
Locus Name:
GeneID:
Location:

GeneID:7370
TrivialName: PA14_55115
AnnotatorUID: danlee
Modification Date/Time:2006-06-28 16:04:19
LocusName:PA14_55115
PAO1 Ortholog Locus:PA0712
Sequence Length:257
Protein Length:85
Start: 4896565
Stop: 4896821
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Replaced by PA14_55117. Homology: PA0712 [gene=PA0712] [prot=hypothetical protein] [comment=PA0712] Length = 85 Score = 174 bits (441), Expect = 2e-045 Identities = 85/85 (100%), Positives = 85/85 (100%)
Sequence:
atgaacgtttccaagccggaacaacggacgcttcacgccttggcccagggcggccatatcgccttccttcgc
gacgcttcgggcaagatcacccgcgtcgagtgctacaaccgcgacggccacctgctactcgactgcaccctg
gcggtgttctccaggctgaagaacaagggcctggtccactcccgccagggcaggccctaccggatatccatg
gccgggctgaaagccgtgcgcccgcaggcggacaatcgctg
Translation:
MNVSKPEQRTLHALAQGGHIAFLRDASGKITRVECYNRDGHLLLDCTLAVFSRLKNKGLVHSRQGRPYRISM
AGLKAVRPQADNR
AnnotationID:7283GeneID:7370
AnnotatorUID: danlee
Modification Date/Time: 2005-12-01 13:01:22
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA0712
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG3811
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|62182927|ref|YP_219344.1|  putative cytoplasmic protein [Salmonella enterica subsp. enterica 
            serovar Choleraesuis str. SC-B67]
gi|62130560|gb|AAX68263.1|  putative cytoplasmic protein [Salmonella enterica subsp. enterica 
            serovar Choleraesuis str. SC-B67]
          Length=85

 Score =  112 bits (281),  Expect = 3e-24
 Identities = 53/85 (62%), Positives = 66/85 (77%), Gaps = 0/85 (0%)

gi|56130542|gb|AAV80048.1|  hypothetical protein SPA4321 [Salmonella enterica subsp. enterica 
            serovar Paratyphi A str. ATCC 9150]
gi|25512207|pir||AC1066  hypothetical protein STY4857 [imported] - Salmonella enterica 
            subsp. enterica serovar Typhi (strain CT18)
gi|16767745|ref|NP_463360.1|  putative cytoplasmic protein [Salmonella typhimurium LT2]
          Length=85

 Score =  111 bits (278),  Expect = 6e-24
 Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 0/85 (0%)






 
Structural Features:
COG3811, Uncharacterized protein conserved in bacteria [Function unknown].
             CD-Length = 85 residues, 100.0% aligned
             Score =  135 bits (341), Expect = 1e-33






   
Genomic Context:






   
Comment: