ViewGene
Locus Name:
GeneID:
Location:

GeneID:7363
TrivialName: PA14_15435
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_15435
PAO1 Ortholog Locus:
Sequence Length:990
Protein Length:329
Start: 1308090
Stop: 1307101
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
atgagcgctttccggccggatggatggacgacgccggaactggcccaagcggtcgagcgcgggcagcttgaa
ctgcactaccagcccgtcgtcgatctgcgcagtggtgggattgtcggcgcggaagccctgttgcgctggcgt
catccgacgcttggactattgccaccgggccagttcctgcccgtggtcgaatcgtccggcctgatgcctgaa
atcggcgcttgggtgctgggcgaagcctgccgccagatgcgtgactggcgaatgctggcatggcgaccgttc
cggctggccgtcaatgtttcggcgagccaagtgggaccggacttcgacgggtgggtaaagggcgtgctggct
gatgccgagttgcccgccgagtatctcgaaatcgagctgaccgaatcggtcgcgtttggtgatccggcgatc
ttccccgccctggacgccttgcggcagatcggtgtgcgcttcgccgccgatgacttcgggacggggtattcc
tgtctgcaacatctgaagtgctgcccaatcagcacgctcaagatcgaccaatcgtttgtcgccgggctcgcc
aacgaccgccgcgaccaaaccatcgtgcacaccgtgattcagcttgcgcacgggctgggcatggatgtggtg
gctgaaggcgtggaaacatcggcgagtcttgatctattgcgacaagcggactgcgacacaggacaaggcttc
ctgttcgcgaagccaatgccggcggcggcattcgccgtcttcgtcagtcaatggaggggtgccaccatgaat
gcaagtgactcgaccaccaccagttgctgcgtgtgctgcaaggaaatcccgctcgatgccgccttcaccccg
gaaggcgcggaatacgtcgagcacttctgcgggttggagtgttatcaacgcttcgaagcgcgtgccaagaca
gggaacgaaaccgatgccgatccgaacgcctgcgactcgctaccgtcagattga
Translation:
MSAFRPDGWTTPELAQAVERGQLELHYQPVVDLRSGGIVGAEALLRWRHPTLGLLPPGQFLPVVESSGLMPE
IGAWVLGEACRQMRDWRMLAWRPFRLAVNVSASQVGPDFDGWVKGVLADAELPAEYLEIELTESVAFGDPAI
FPALDALRQIGVRFAADDFGTGYSCLQHLKCCPISTLKIDQSFVAGLANDRRDQTIVHTVIQLAHGLGMDVV
AEGVETSASLDLLRQADCDTGQGFLFAKPMPAAAFAVFVSQWRGATMNASDSTTTSCCVCCKEIPLDAAFTP
EGAEYVEHFCGLECYQRFEARAKTGNETDADPNACDSLPSD*
AnnotationID:7276GeneID:7363
AnnotatorUID: danlee
Modification Date/Time: 2005-10-18 13:01:29
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:cd01948, smart00052
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|31795174|ref|NP_858032.1|  hypothetical protein pB10p61 [uncultured bacterium]
gi|56550658|ref|YP_161724.1|  hypothetical protein RMe0102 [Ralstonia metallidurans CH34]
     Length=329
     Score =  678 bits (1750),  Expect = 0.0
     Identities = 329/329 (100%), Positives = 329/329 (100%), Gaps = 0/329 (0%)


gi|1182007|emb|CAA77326.1|  unnamed protein product [Pseudomonas aeruginosa]
     Length=329
     Score =  677 bits (1746),  Expect = 0.0
     Identities = 328/329 (99%), Positives = 328/329 (99%), Gaps = 0/329 (0%)

gi|13449210|ref|NP_085426.1|  Tn501, conserved hypothetical orf [Shigella flexneri]
     Length=485
     Score =  677 bits (1746),  Expect = 0.0
     Identities = 328/329 (99%), Positives = 328/329 (99%), Gaps = 0/329 (0%)

gi|2944145|gb|AAC38223.1|  Urf2 [Pseudomonas stutzeri]
     Length=329
     Score =  670 bits (1728),  Expect = 0.0
     Identities = 325/329 (98%), Positives = 325/329 (98%), Gaps = 0/329 (0%)

gi|68559064|ref|ZP_00598400.1|  EAL [Ralstonia metallidurans CH34]
gi|56130730|ref|YP_145633.1|  hypothetical protein RMep34 [Ralstonia metallidurans CH34]
gi|56068720|emb|CAI11282.1|  hypothetical protein [Ralstonia metallidurans CH34]
     Length=333
     Score =  636 bits (1641),  Expect = 0.0
     Identities = 309/310 (99%), Positives = 310/310 (100%), Gaps = 0/310 (0%)






 
Structural Features:
cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. Also known as 
domain of unknown function 2 (DUF2).
             CD-Length = 240 residues,  99.6% aligned
             Score =  298 bits (764), Expect = 7e-82

smart00052, DUF2, Domain of Unknown Function 2; Domain apparently occurring exclusively in eubacteria. 
             CD-Length = 246 residues,  98.8% aligned
             Score =  297 bits (762), Expect = 1e-81






   
Genomic Context:






   
Comment: