ViewGene
Locus Name:
GeneID:
Location:

GeneID:7225
TrivialName: PA14_28900
AnnotatorUID: danlee
Modification Date/Time:2006-06-28 15:03:09
LocusName:PA14_28900
PAO1 Ortholog Locus:
Sequence Length:3634
Protein Length:1211
Start: 2500235
Stop: 2496602
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Fused with PA14_28890 to create PA14_28895. Homolog: gb|AAG06115.1|AE004700_11 (AE004700) hypothetical protein PA2727 [Pseudomonas aeruginosa PAO1]
Sequence:
ATGATACGTTTCTGCCCCAACTGCCAGAGCGAACGCTCGCTTTCGGAAATTTTCTGCGAAGGCTCGATCCAG
GGCCAGCCCTGCGGCTGGGACCTTTCCGCCGAAGCCATCCATCCCGCCGGCTGGCGACCGCAACCGGTGCTG
ACCCAGGAAGCCATCGCGCCACCCGCCAGCGAGCCGCCAGCGGCGTCCGCCCCGCTCTGCGCCAACGGCCAC
CCGCTGCAACCCGGCGACCTGATGTGCCTGGAGTGCGGCGCCGCGCCGGCCGAAGGCCCGCTGCCGATGCAG
GCCGAGGCCACGCCGCAGCCCGCCGTCACGGAAACCCTGATCGACGGCTGGCGCCTGCTGCGGCAGATCGTC
AGCAGCGACGGCGTGCGCGAGCGCTACCTGGCCGAACATGCGGAAAGGGCCCGTCAGGCGGTGCTCACCCTG
TATCGCCCGGGCGCCGAGCCGGACCCGGCGATCTACGACGTGATCCGCCGCCTGCCGCGCGAACACGTGCCG
GAAATCCTCGCCAGCGGCCGCTGGGACGAGCGCGCCTACGAAGTGGTCGAGGAACTCACCGGCGGCAGCCTC
GCCGAGCTCGGCACCGTGCTGGAGGACCGCGAGGCGGTGCGCCACGTGGTCCGCGAGCTGGGCCACGCCCTG
CACGTGTTCAACGAAGCCGGCCTGCGCCACCGCGACCTGCGCCCGGCCAGCCTGCTGGTGCGCAGCCACGAG
CCACTGGACCTGGTGATCAGCGGCTTCGGCTCGGCCCGCCTGTCGGAGTTCGACCTGGATATCGTCTCGCCG
CTGGAGACCAGCCGCTACATGGCCCCCGAGGCGATCGCCGGCGGCGTGGCGGCGGCTTCCGACTGGTGGAGC
CTGGGCATGATCCTGCTGGAGCAGTTGACCCGCGGCGCCTGCTTCGAAGGGGTCAACGCCAACGCCTTCCTG
ATCCACGTACTGGCCAACGGCGTGGCGCTGCCCGACGACCTCGACCCGCAGTTGCACCTGCTGCTGCGCGGC
CTGCTTGCACGCGACCGCCACCAGCGCTGGCAGTGGCCGCAGGTACAGGCCTGGCTGAACGGCGAGGCGGTG
GACGCGCCGGCCTCGGCGGACAGCGAAAAGGACGACGCCGAAGGCGCCAGCATCGCCCTCGGCGCCCGGCGC
TTCCGCAAGCCGACGGTCTTCGCCCTGGCCGCGGCCCAGGCCGAGCACTGGGCGGAGGCCCTCGACCACCTG
CTGCGCGGGGCGATCGTCACCTGGGCCGAGCACATCGGCCTGTCGCCCAGGCTGCTCGCCGGCCTGCGCCAG
GTGGCCCAGCACGAGGGGCTGGAGGACGACTTCCGGCTGATGCTGGCGCTCAAGCTGCTGAACCCGGAAATC
CCGCTGATCCAGCGCGGCGAGATCGTCACCCCCGGCTGGCTGCTGGAGCATCCGCTGGAGGGCCACCGGCTG
ATCAGCGGCTCGGTGCCCGACCTGCTCGAACAGTTGCACACCGAAAGCTGGCTGTCGCGGCTCAAGACCCGC
GCCGAGAACGTCCGCCAGCGTGCCCTGCACCAGCACATCGAACTCGCAGAAGAACAGTTGCGCATCTACCTG
CTGTCGACCTCGCGGGCGCGCCTCGCCGCGCAGTGGCAGGAGCGCCAGCGCCTCCTGCCGGACACCGAGCAC
CCCGGCCTGCTGGCCCTGGCCGAGCGCCGGGTGATCGCCGAGGAAGACCTGATCGTCCTGCTCAGCGCCAAC
ATCGGCCAGTTCCGTGCCGCCGAGGCGATCGTCGAGGAAGCCACCGGCCTGGCCCGCGACGCCGATGTGCAC
CTGTTCGACGCGGAGACCGCGCGCGGCCTGTTGCAGCACTCGCGGCAGGAGTTGTACCGCCGCGTCGACGAA
CGCATCAGCGGCTTCGCCCGCAGCGGCGTGCCCAGGGTCGACGAATGGGCCGAGCAGTTCCGCCTGGAGCGG
CGCATGCCGTTGGCGAGGGTCCTGGTGCTGCTGGCGATCCCGCCGGAACAGTGGCTGGAACCGCAGAAGCAG
CAGTACGTGTCGCAGATCCTCGATTTCTTCGAGAAGAAAGTGGTCGCCGCAGTGATGCGCGGGCCGCTGGTG
CGCATGAGCATCGGCAAGAGCACTCCACGCATCGACCTCAACGAACTGGATAGCGCGCGACGCCCCGCCGCC
GCTCTGCTCGACCACCTGCTGCAACGCAACGCCCGCGCGGTGAGCCTCGACCCGGACAGCTTCCTCGCCAAC
CCGCAACTGGAAGTGCGGCTCAACGCGCTGTCCCGGCAAAGCTCGCTGTACAAGCGCGACACCGGCATCGAC
GGCCTCTACCTGGGCTTCCCCTTCCTGCTCAACCGCGACCCGCGCGGCACCACCCGCACGCGCATCGTGCCG
CTGCTACTGTGGCCGCTGAAGCTGCAACTGGAAGTCGGCAGCCGCGGCCAGGTGGCGCTGGCCTTCGACGGC
GAACGCGAGGAAGTGCGCCTCAACCCGGCCCTGGAAAGCCTGCTCGGCCCCGAGCCGTGCAAGCGCTGGCGC
AAGGTCGCCGACGAATTGCTCGGCCGCTCCGCGCTGCGCGCCGCCGACGTGATGGATGCCTTCGGCCTGCTC
GCCACCCCGCGTGCGCGGGTGCTGGAAGGATTGCCGCCGAGTTCCACCGAGGTCACGCCCTACCAGGACCAA
CTGGCCTGCGCCGCGGTGCTGTTCCACGTCACCTTCATGGGCCAGGCGATCGGCGAGGACCTGCGCCAGCTG
AAGAGCCTGCCGCCCTCCGGCACCGGCCTGGAGACCGCGCTGCGCCTGCGCGAGAACGACGAGCCGGAAGCC
CGCGAGAGCCCGCCGGAGTTGCAGCGCTACTTCACCGTGGCCAGCGACCCGTCCCAGGAGGCCGCCGTGCTG
CAGGCCCGGCAGAGCCCGGGGCTGCTGGTGGAGGGCCCGCCCGGCACCGGCAAGAGCCAGACCATCGTCAAC
ATGGTCGCCGACGCCATCGGCCGCCAGCGCAGCCTGCTGATCGTCTGCCAGAAGCACGCCGCCCTGGAAGTG
GTGCACAAGCGCCTGGTGGCCGAGGGCCTGGGCCAGCGCATCGTCATGCTCAACGACGTCAACCGCGACCGC
GAACCGGTGATCCGCAACATCCGCGAGCAGCTCGAAGCGCTGTTCGCCGACGCCGGCGGCGCCCAGGGCTGG
GAGCGCCAGCGCGAGCGCCTGGCGGCGCGTATCGAGGCGCTGGAAGGCGAACTGGACCGCTACCACCAGAGC
CTGCACCGCGTGGACGAGGCCACCGGGCTGAGCTACCGGCGCCTGCTCGGCGAACTGATCGAGCTGGAGAAA
GGCTCGCCGCCGCTGGACTTCCCGGCCCTGCGCCAGCGCCTGGCGGCGCTGGACATCGGCAGCCTGGCGCGC
CTGGAGGAAAACTGCGCGCCGCTGGTCCGCCTCTGGCTACCGGCCCGCTACGAAGGCAGCCCGCTGGCGCAA
CTGCGCGCCTTCGCCACCGATCAGGCCACCCTGCAAGCCTTCGCCGACAGCCTGCGCGCCTTCGGCGAAGCG
GAGAACGCCCGGCAGAAAGCCCTCGACGAACACCCGGCGAGCTTCGAGGTCGACGACCCGACGCCCTACCGC
GCCTGGCTGGCAAGCCAGGTCGGTACCCTGCTGA
Translation:
MIRFCPNCQSERSLSEIFCEGSIQGQPCGWDLSAEAIHPAGWRPQPVLTQEAIAPPASEPPAASAPLCANGH
PLQPGDLMCLECGAAPAEGPLPMQAEATPQPAVTETLIDGWRLLRQIVSSDGVRERYLAEHAERARQAVLTL
YRPGAEPDPAIYDVIRRLPREHVPEILASGRWDERAYEVVEELTGGSLAELGTVLEDREAVRHVVRELGHAL
HVFNEAGLRHRDLRPASLLVRSHEPLDLVISGFGSARLSEFDLDIVSPLETSRYMAPEAIAGGVAAASDWWS
LGMILLEQLTRGACFEGVNANAFLIHVLANGVALPDDLDPQLHLLLRGLLARDRHQRWQWPQVQAWLNGEAV
DAPASADSEKDDAEGASIALGARRFRKPTVFALAAAQAEHWAEALDHLLRGAIVTWAEHIGLSPRLLAGLRQ
VAQHEGLEDDFRLMLALKLLNPEIPLIQRGEIVTPGWLLEHPLEGHRLISGSVPDLLEQLHTESWLSRLKTR
AENVRQRALHQHIELAEEQLRIYLLSTSRARLAAQWQERQRLLPDTEHPGLLALAERRVIAEEDLIVLLSAN
IGQFRAAEAIVEEATGLARDADVHLFDAETARGLLQHSRQELYRRVDERISGFARSGVPRVDEWAEQFRLER
RMPLARVLVLLAIPPEQWLEPQKQQYVSQILDFFEKKVVAAVMRGPLVRMSIGKSTPRIDLNELDSARRPAA
ALLDHLLQRNARAVSLDPDSFLANPQLEVRLNALSRQSSLYKRDTGIDGLYLGFPFLLNRDPRGTTRTRIVP
LLLWPLKLQLEVGSRGQVALAFDGEREEVRLNPALESLLGPEPCKRWRKVADELLGRSALRAADVMDAFGLL
ATPRARVLEGLPPSSTEVTPYQDQLACAAVLFHVTFMGQAIGEDLRQLKSLPPSGTGLETALRLRENDEPEA
RESPPELQRYFTVASDPSQEAAVLQARQSPGLLVEGPPGTGKSQTIVNMVADAIGRQRSLLIVCQKHAALEV
VHKRLVAEGLGQRIVMLNDVNRDREPVIRNIREQLEALFADAGGAQGWERQRERLAARIEALEGELDRYHQS
LHRVDEATGLSYRRLLGELIELEKGSPPLDFPALRQRLAALDIGSLARLEENCAPLVRLWLPARYEGSPLAQ
LRAFATDQATLQAFADSLRAFGEAENARQKALDEHPASFEVDDPTPYRAWLASQVGTLL
AnnotationID:7208GeneID:7225
AnnotatorUID: danlee
Modification Date/Time: 2006-02-07 18:06:36
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:(1) Cytoplasmic
Synonyms:PA2727
Cell Localization Confidence Code:3
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|84327057|ref|ZP_00975081.1|  COG1112: Superfamily I DNA and RNA helicases and helicase subunits 
[Pseudomonas aeruginosa 2192]
Length=2098

 Score = 2367 bits (6135),  Expect = 0.0
 Identities = 1199/1211 (99%), Positives = 1201/1211 (99%), Gaps = 0/1211 (0%)

gi|9948803|gb|AAG06115.1|  hypothetical protein PA2727 [Pseudomonas aeruginosa PAO1]
 gi|15597923|ref|NP_251417.1|  hypothetical protein PA2727 [Pseudomonas aeruginosa PAO1]
Length=1210

 Score = 2187 bits (5667),  Expect = 0.0
 Identities = 1106/1115 (99%), Positives = 1108/1115 (99%), Gaps = 0/1115 (0%)






 
Structural Features:






   
Genomic Context:






   
Comment:
Confirmed frame-shift in C-terminus results in altered sequence of the last 95 aa of PAO1 
(last 96 aa of PA14_28900).