ViewGene

Locus Name:
GeneID:
Location:

GeneID:7194
TrivialName: PA14_08550
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_08550
PAO1 Ortholog Locus:
Sequence Length:1755
Protein Length:584
Start: 732909
Stop: 731155
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:TRUE
Comments:
Sequence:
TTGGTcaaGGCTTTCGTCTcAACCGAGGCCGCGCATTCTACAGCAACCTCTCGTTCCGtccagCGTTATTTT
CGAAAATTTTCTTTTCTACTCAACCGCTTGCGCCGACCTTCAAACCATCTTCCGATCAGCGGGAGGCGCATT
CTACAGCGTTCAAATTCGCTGTCAAGCACCTCGGTGAGCTTCGTTtccgAATCCCTTTCGGGACCGAACCGC
TGCGGCGAACAACCTGCCGGAGCGCTTCACCACTCCTGGGAGAGAATCCGTAAATCCTTGATTTTCAAGCAT
TTACTCTTCGTCGTCGCCGGGAGTGGTGCGCATTATAGGGAGATAGAAACTGGCGTCAACACTTATTTGAAA
GAATTATTCAGCTTTCAGCGTGATGCGCGCGAAAGCCTTCTTCCCTGCCTGGAACACACGGGTTTCACCCAG
CGCCAGCATGAAGGTGCGGTCGACGACCTGCCCATCCACCTTGACGCTGCCGGCACCCAGGAGATCGCGAGC
CGCAGCCGCATTCTTCACCAACCCCGCCTTATTAAGGACAGAGGCAACGGGCATATCCTCGGGGGACGACAG
CTCGATCTCCGGCAGGTCCTCCGGCAGCTCGCCCTCCTTCAGGCGATTGCCGGCCGACTTGTGTGCGCTCGC
CGCCGCCTCCTCGCCATGGAAGCGGGCGACGATCTCCTCGGCCAGCTTGATCTTGATGTCACGCGGGTTGGC
GCCCGCCTCGACGTCCTTGCGGAAGCTATCGATCTCATCCAGGGAACGGAAGCTGAGCAGTTCGAAGTAACG
CCACATCAGCGTGTCAGGAATGGAGACCAGCTTGCTGTACATGACACCCGGCGCTTCCTGGATACCAATATA
GTTGCCCAGCGACTTGGACATCTTCTTCACGCCATCCAGCCCTTCCAGCAACGGCATGGTCAGGATCACCTG
GGCCTCCTGACCATAGGCGCGCTGCAGCTCGCGCCCCATCAGCAGGTTGAACTTCTGGTCGGTGCCACCCAA
CTCGACGTCCGCCTTCAGCGCGACGGAGTCATAGCCCTGGACCAGCGGATAGAGGAACTCATGGATAGCGAT
GGGCTGATTGCTGGCATAGCGCTTGCTAAAGTCATCGCGCTCCAGCATGCGCGCAACGGTGTACTGAGAGGC
AAGACGAATGAAGTCAGCCGGGGTCAGCTGGTCCATCCAGGTGGAATTGAAGGCTACTTCGGTCTTGGCCGG
GTCGAGGATCTTGAAGACCTGGGACTTGTACGTCTCCGCATTCTCCAGAACCTGCTCGCGCGTCAGGGGAGG
ACGGGTAACACTTTTCCCACTGGGGTCACCGATCATCCCAGTGAAGTCACCGATGAGGAAGATCACCTGATG
CCCCAGGTCCTGGAACTGGCGCAGCTTATTAATAAGCACGGTATGGCCAAGATGCAGATCGGGAGCGGTCGG
GTCGAAGCCGGCCTTGATCCGCAAGGGCTGGCCACGCTTCAGCTTGGCCACCAGTTCCGCCTCTACCAGGAT
CTCGTCTGCACCGCGCTGGATCAGCGCCAGCTGCTCTTCAACCGACTTCATTTACAGGTTCTGCCCAATTGC
CAAAATCGAAAGGGAACCAACCATACAAGATCGCAGACTAAAAACAAATTTTGCCGACCGTCAGGGGGACGG
AGCCAGGCCAGACGCGACTTTTGGCTTGATTCAAGGAGATTTTGGTTATATTTTAGGCAGTTATTTATTCAC
AATCCAAAAACACCAATCACGCCATGA
Translation:
MVKAFVSTEAAHSTATSRSVQRYFRKFSFLLNRLRRPSNHLPISGRRILQRSNSLSSTSVSFVSESLSGPNR
CGEQPAGALHHSWERIRKSLIFKHLLFVVAGSGAHYREIETGVNTYLKELFSFQRDARESLLPCLEHTGFTQ
RQHEGAVDDLPIHLDAAGTQEIASRSRILHQPRLIKDRGNGHILGGRQLDLRQVLRQLALLQAIAGRLVCAR
RRLLAMEAGDDLLGQLDLDVTRVGARLDVLAEAIDLIQGTEAEQFEVTPHQRVRNGDQLAVHDTRRFLDTNI
VAQRLGHLLHAIQPFQQRHGQDHLGLLTIGALQLAPHQQVELLVGATQLDVRLQRDGVIALDQRIEELMDSD
GLIAGIALAKVIALQHARNGVLRGKTNEVSRGQLVHPGGIEGYFGLGRVEDLEDLGLVRLRILQNLLARQGR
TGNTFPTGVTDHPSEVTDEEDHLMPQVLELAQLINKHGMAKMQIGSGRVEAGLDPQGLATLQLGHQFRLYQD
LVCTALDQRQLLFNRLHLQVLPNCQNRKGTNHTRSQTKNKFCRPSGGRSQARRDFWLDSRRFWLYFRQLFIH
NPKTPITP*
AnnotationID:7194GeneID:7194
AnnotatorUID: diggins
Modification Date/Time: 2005-03-29 19:07:22
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16925
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31456
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50196How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6534252Stop: 6532498
Length: 1755
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGGTcaaGGCTTTCGTCTcAACCGAGGCCGCGCATTCTACAGCAACCTCTCGTTCCGtccagCGTTATTTT
CGAAAATTTTCTTTTCTACTCAACCGCTTGCGCCGACCTTCAAACCATCTTCCGATCAGCGGGAGGCGCATT
CTACAGCGTTCAAATTCGCTGTCAAGCACCTCGGTGAGCTTCGTTtccgAATCCCTTTCGGGACCGAACCGC
TGCGGCGAACAACCTGCCGGAGCGCTTCACCACTCCTGGGAGAGAATCCGTAAATCCTTGATTTTCAAGCAT
TTACTCTTCGTCGTCGCCGGGAGTGGTGCGCATTATAGGGAGATAGAAACTGGCGTCAACACTTATTTGAAA
GAATTATTCAGCTTTCAGCGTGATGCGCGCGAAAGCCTTCTTCCCTGCCTGGAACACACGGGTTTCACCCAG
CGCCAGCATGAAGGTGCGGTCGACGACCTGCCCATCCACCTTGACGCTGCCGGCACCCAGGAGATCGCGAGC
CGCAGCCGCATTCTTCACCAACCCCGCCTTATTAAGGACAGAGGCAACGGGCATATCCTCGGGGGACGACAG
CTCGATCTCCGGCAGGTCCTCCGGCAGCTCGCCCTCCTTCAGGCGATTGCCGGCCGACTTGTGTGCGCTCGC
CGCCGCCTCCTCGCCATGGAAGCGGGCGACGATCTCCTCGGCCAGCTTGATCTTGATGTCACGCGGGTTGGC
GCCCGCCTCGACGTCCTTGCGGAAGCTATCGATCTCATCCAGGGAACGGAAGCTGAGCAGTTCGAAGTAACG
CCACATCAGCGTGTCAGGAATGGAGACCAGCTTGCTGTACATGACACCCGGCGCTTCCTGGATACCAATATA
GTTGCCCAGCGACTTGGACATCTTCTTCACGCCATCCAGCCCTTCCAGCAACGGCATGGTCAGGATCACCTG
GGCCTCCTGACCATAGGCGCGCTGCAGCTCGCGCCCCATCAGCAGGTTGAACTTCTGGTCGGTGCCACCCAA
CTCGACGTCCGCCTTCAGCGCGACGGAGTCATAGCCCTGGACCAGCGGATAGAGGAACTCATGGATAGCGAT
GGGCTGATTGCTGGCATAGCGCTTGCTAAAGTCATCGCGCTCCAGCATGCGCGCAACGGTGTACTGAGAGGC
AAGACGAATGAAGTCAGCCGGGGTCAGCTGGTCCATCCAGGTGGAATTGAAGGCTACTTCGGTCTTGGCCGG
GTCGAGGATCTTGAAGACCTGGGACTTGTACGTCTCCGCATTCTCCAGAACCTGCTCGCGCGTCAGGGGAGG
ACGGGTAACACTTTTCCCACTGGGGTCACCGATCATCCCAGTGAAGTCACCGATGAGGAAGATCACCTGATG
CCCCAGGTCCTGGAACTGGCGCAGCTTATTAATAAGCACGGTATGGCCAAGATGCAGATCGGGAGCGGTCGG
GTCGAAGCCGGCCTTGATCCGCAAGGGCTGGCCACGCTTCAGCTTGGCCACCAGTTCCGCCTCTACCAGGAT
CTCGTCTGCACCGCGCTGGATCAGCGCCAGCTGCTCTTCAACCGACTTCATTTACAGGTTCTGCCCAATTGC
CAAAATCGAAAGGGAACCAACCATACAAGATCGCAGACTAAAAACAAATTTTGCCGACCGTCAGGGGGACGG
AGCCAGGCCAGACGCGACTTTTGGCTTGATTCAAGGAGATTTTGGTTATATTTTAGGCAGTTATTTATTCAC
AATCCAAAAACACCAATCACGCCATGA