ViewGene
Locus Name:
GeneID:
Location:

GeneID:7192
TrivialName: PA14_08410
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_08410
PAO1 Ortholog Locus:
Sequence Length:594
Protein Length:197
Start: 719624
Stop: 720217
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCTGTTCCTCGTCGATACGCATCTGCTCGAGGATGGCACGGGATTTCCGATCCTCCTGGGGAATCTGCGC
CAGGTGTTCGTCCAGATGCTTGCACACCTGGTCTTCGGTGGCGGCGACGAAGCCCAGGCTGACCCGGTCGCT
GACCAGCCCGGCGGCGGCACCGACGCCGAAGGACAGGCCGTAGAAGATCGGATTGAGGACGCTGGGACGGCT
GCCCAACTGGCGGATGCGTTGCTCGCACCAGGCCAGGTGGTCGATCTCCTCCTCGGCGGCTTCCTCCATCGC
CTCGCGGACCTCGGGCAGCTTGGCGGTCAGCGACTGGCCCTGGTACAGCGCCTGGGCGCAGACCTCGCCGGT
GTGGTTGATGCGCATCAGGCCGGCGATATGGCGGGTGTCTTCCTCGCTCAGTTCGCCATCGGGTTCCACGAT
GGCCGGCGACGGTCGCGCCGGCTGGCCGCTGAACGGCAGCAGGGTGCGCAGGGCGGAGTCGGCCTGCAGCAG
GAAACGGTCGATGGGCGAATAGTGGCGGTCGGCGGACATGGCGCACCTCCGGAAACGAAAGATCGCACCAGT
TTACCGGAAGTGCGCTGA
Translation:
MLFLVDTHLLEDGTGFPILLGNLRQVFVQMLAHLVFGGGDEAQADPVADQPGGGTDAEGQAVEDRIEDAGTA
AQLADALLAPGQVVDLLLGGFLHRLADLGQLGGQRLALVQRLGADLAGVVDAHQAGDMAGVFLAQFAIGFHD
GRRRSRRLAAERQQGAQGGVGLQQETVDGRIVAVGGHGAPPETKDRTSLPEVR*
AnnotationID:7192GeneID:7192
AnnotatorUID: diggins
Modification Date/Time: 2005-03-29 18:06:27
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:14015




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:31452




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 50194How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 6520967Stop: 6521560

          
Length: 594


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: psyr_15may02_Scaffold14_revised_gene2363Homolog Bit Score 145.0

          
Other Homologs:  psyr_15may02_Scaffold14_revised_gene2363 (BLASTP 145)

          
GC ORF Sequence

           
ATGCTGTTCCTCGTCGATACGCATCTGCTCGAGGATGGCACGGGATTTCCGATCCTCCTGGGGAATCTGCGC 
CAGGTGTTCGTCCAGATGCTTGCACACCTGGTCTTCGGTGGCGGCGACGAAGCCCAGGCTGACCCGGTCGCT 
GACCAGCCCGGCGGCGGCACCGACGCCGAAGGACAGGCCGTAGAAGATCGGATTGAGGACGCTGGGACGGCT 
GCCCAACTGGCGGATGCGTTGCTCGCACCAGGCCAGGTGGTCGATCTCCTCCTCGGCGGCTTCCTCCATCGC 
CTCGCGGACCTCGGGCAGCTTGGCGGTCAGCGACTGGCCCTGGTACAGCGCCTGGGCGCAGACCTCGCCGGT 
GTGGTTGATGCGCATCAGGCCGGCGATATGGCGGGTGTCTTCCTCGCTCAGTTCGCCATCGGGTTCCACGAT 
GGCCGGCGACGGTCGCGCCGGCTGGCCGCTGAACGGCAGCAGGGTGCGCAGGGCGGAGTCGGCCTGCAGCAG 
GAAACGGTCGATGGGCGAATAGTGGCGGTCGGCGGACATGGCGCACCTCCGGAAACGAAAGATCGCACCAGT 
TTACCGGAAGTGCGCTGA