ViewGene

Locus Name:
GeneID:
Location:

GeneID:7191
TrivialName: PA14_08290
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_08290
PAO1 Ortholog Locus:
Sequence Length:3306
Protein Length:1101
Start: 710984
Stop: 707679
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGAGAGGTGGTCTGGATGTTCGCCTCGTTGGTATCGGTGCGCGCGCTGACGGTATCCACCCGCTGCCCCAG
GGCGCTGTCCGCGTTGGCACGGACGGTCTGTTCGGTGCTGATCGCCGAGGCGTTGCTCGCAACCTGGCCGGT
GAGCTGATCCAGCCGCTGGACGGTTACAGCATTGTTCGACGCAACGACCGACTCGACGGTTGCGATCCTGCC
CTCCGCCGTCCCGGTCCACGCCTCAAGCAAGCTCGTCCGCTTCGCCTGCGCTTCGTCCTCGTTCGCCCGCAC
GGTGACTTCGGTGGCAGCTCGAGCAATGGTGTCCCAGCCCTTCAGCGCATCCGCCTTCTCTCCGGTCGCCGG
TTCCCCGCGGGCGGCAGCTTGCAGCACATCCAGATTCGATGCCGCTGCTTCGATCCTGCCGTCGAGTTCGCT
GATTTCAGCGGTATGGCTCGCCACCTGCTGCGCCAGCCCGTTGGCAGTTTCCAGCGACTGGCCGATATCGGA
CCAGTAGGCCGCGTTCGGCGGCGCCGTCTTCGCCGGCACAGCCTTCAGTGCCTGGTACAACCGCTGCCCCTG
TCGCACCATTTCGTTCTTCGCGTAGACCTTGGTCGGGTCGTACAGCAAAACGTCGGCGAGGTCGCCGACCTG
CTTCTGCAAGCCCCCGATATCCACCTGCATCCGCTCGATATCGGAGAAGAATTGCTGGCCCAGCGCCGACTC
GACGTACTCCTGGGTGATCAACTGGTTGTATTCGCTGGCGTCGCTGGAGCTGGTGCCGGTGACCCAGTTCGA
CCAGGCGCCGACGTTGCCGCTACGGTCGATCAAGCGACCGCGGAACGCCAGCCGTTCGCCGGCCGGTATCGG
CGATACCAGGTGGGTATTGCCTGGGTAGGCGAACAGGCCCAGCGCCCGTGCGGTCTCCTCGCTGCCGCCGGG
CGTGGCGGACTGCTGGATCTCGGTGTAGGCGGTGTCCGCTGCGCCGCTGGCCGGGAACCCCCACTCCAGGCC
GATGCGCCAGGGGCCGGCCACGCAGCGCAGGTAGGCCAGCGCCGGCGGCGGCGTGGTCTTGCCCTCAAGAGC
GGTCTCCACACTGCTGGCGTAGACCGAGCCGACCTCCATCACGTTCAAGGCGCGTACCCGCACCAGATAGCG
ACCGGCATAGATGCCCGGCACGTCGAAACCGAGCGCCGAGGTTCGCGGCACCCGCACCCAGTTGCCCGAGTC
CTTGCGCCATTCGGCCTCGTAGGCCACCGCGTTCGGCGCGGCATCCCAGGAGGCCGACAGGCTGGTCACCGC
CAACCCCTGGTCGACCTTGGTGAAAGCCTTGATCCGCACGTTCTGCGGCGGCGCCTGCACGCCCGGCGGAAT
GCTGGTGACCGGCGGCAGCTCGATGCGCGCACCGTTGTCGATGGCGTCGAACTTGCTCGCGTTGTGTTGCAG
CGCGGTGATCTCGAAAAGATTGTCCTCCGGCCGGGTGATGCTCATGATGCGGAAGCGCTGGGTGGTCAGGCT
GTTGCTCTGCAGCGCCCACTGCCCCTGGGGCCGAGGCGTCTCCGAATAGGCGGCGGTCACGGTCAGCACGCG
GCCTACCACCGACTGGACGCTGCGCGCCTCGGCCTTGCCGTTCGGCAGGTTGACCAGCAGGCGATCGCCGGG
TCGGGCCTCGACGTCGCGGTCGAGGGTCAGCGCGCGGCCATCCACCGCGCTCAGGCGTCCGCCGATCTGCTT
GCCGGACTTGACCGGGTCGGCTACGGCGATGATCTTCCCCGGCGCCAGCCCACGGCCATCCATGCCGGTGCG
GAAGGTCACCGCGTCCTGCTCCAGCTCCTCGGTCAGCAGCGCCCACTGGCCACGCCGCTGCGCCTCGCCCTC
GGAGGTGCAACCGATCGCGGTGATCTCCAACTGGCTGATGCCGTAGCGGCGCTGCGCGCGGTCATTGTTCAC
CGCTACCGGTTGGCTCTGGTAACCGTTGCCCGGATTGTCGTAGTTGACCAGGGCCAGGGTGTGGCGATCGCG
CTGGCGGCTGCTGCTGTAGTTGAAGTGGCTGCCGTCGTCGCCACGCACGGTGTTCGACGGCGAGAAGGTGTA
GGCCTCGTCCTCCGGCATGTCGGATACCGCCACCATTTCCGCGCCGGACCAGTAGGACATGCCGCGGAAGAT
CGCTGCCAGGTCGCGCAGCACGGTCCAGGCTTCGGCGCGACTCTGCAGGTACAGGTTGCAGCTGAAGCGCGG
CTCCTGGCCGCCCTTGCCGTCGGGCACCGACTGGTCGCAGTACTGGGCGATGCGGTACAGCGACCACTTGTC
GACCATGCTCGCGTCGATCCGCCGACCGAGGCCGAAGCGCTTGTGCAACACGATGTCGTACCAGTGCCAGGC
CGGGTTGCTGGTCCAGGCCGACTTGAACGAGCCGTCCCAGGTGCCGCTGTAGCTACGGGTCTGCGGATCGTA
GTTGCTCGGCACCCGCACCCGCCGGCCGCGCGCTTCCACCGATATCTGCGGAATGCTCTGGAACTGGCTGGC
ATCGAACTCGACGAACAGCAGCGCGGTGTTCGGGTAGCGCAGCTTGGCGTCGATCACCTCGGTGATCGCCTC
CACCCGCATGGTGTCGGCGACGCGGTTGTTGTTCTGGTTCGGCGTCAGGCGGCGCACGCGCACCTGCCAGCC
GCTCCGCGCCTCCGGCAGGTCGACACGGTGGGAGCGCTCGTAGCGGCTGGTGGACTTGTCGTCCAGCGAAGC
CTTCAGCGCTTCCTGCCAGGCACCGCCGTCGACGGCGATGTCGATCGCGTAGTCGATGCGGTAGCCGACCAC
GTCACCGTTTTCCTGCTGGCGCTGGATGGCCGGCCAGGACAGGCGCAGGCGCACCGCCGAGAGCTGGGTGTT
GTTCACCGCGCGGACCCAGGGCGCGTCACTCTTGAGTTCGACGCCGACCGCCAGTTCGTTTTCCACGGCGGG
CACACCGGCAATGTGTTCCTGGTCCACCGAGCCCGGACGGAACTCCCAGGTCACTCCGGGGAAGTTCACCGA
GCCGTCCGCCGCCAGCAGCGGCGTATCGTCCAGGTAGATCGAACGGCCGTCGACGCCACCGTCGAACTCGCC
TTCGCCCAGTGCCAGGAGAATCTTCGCCCGCGCGATCGAGCGCACCGAGTCCGGCATCTCCACCGGCTGGCG
CGGCTTCTTGCTGCCACCCTTGTGGCCCGTGATGGTCTTGTTCATGACGTTCCTTCAGGCAAAAAAACGCCC
GCGCATGGCGGGCCTGTTACGGCGTTGCCGGCTACAGCCGGTCCTCGGCATAGATGCCGGCGCTGA
Translation:
MRGGLDVRLVGIGARADGIHPLPQGAVRVGTDGLFGADRRGVARNLAGELIQPLDGYSIVRRNDRLDGCDPA
LRRPGPRLKQARPLRLRFVLVRPHGDFGGSSSNGVPALQRIRLLSGRRFPAGGSLQHIQIRCRCFDPAVEFA
DFSGMARHLLRQPVGSFQRLADIGPVGRVRRRRLRRHSLQCLVQPLPLSHHFVLRVDLGRVVQQNVGEVADL
LLQAPDIHLHPLDIGEELLAQRRLDVLLGDQLVVFAGVAGAGAGDPVRPGADVAATVDQATAERQPFAGRYR
RYQVGIAWVGEQAQRPCGLLAAAGRGGLLDLGVGGVRCAAGREPPLQADAPGAGHAAQVGQRRRRRGLALKS
GLHTAGVDRADLHHVQGAYPHQIATGIDARHVETERRGSRHPHPVARVLAPFGLVGHRVRRGIPGGRQAGHR
QPLVDLGESLDPHVLRRRLHARRNAGDRRQLDARTVVDGVELARVVLQRGDLEKIVLRPGDAHDAEALGGQA
VALQRPLPLGPRRLRIGGGHGQHAAYHRLDAARLGLAVRQVDQQAIAGSGLDVAVEGQRAAIHRAQASADLL
AGLDRVGYGDDLPRRQPTAIHAGAEGHRVLLQLLGQQRPLATPLRLALGGATDRGDLQLADAVAALRAVIVH
RYRLALVTVARIVVVDQGQGVAIALAAAAVVEVAAVVATHGVRRREGVGLVLRHVGYRHHFRAGPVGHAAED
RCQVAQHGPGFGATLQVQVAAEARLLAALAVGHRLVAVLGDAVQRPLVDHARVDPPTEAEALVQHDVVPVPG
RVAGPGRLERAVPGAAVATGLRIVVARHPHPPAARFHRYLRNALELAGIELDEQQRGVRVAQLGVDHLGDRL
HPHGVGDAVVVLVRRQAAHAHLPAAPRLRQVDTVGALVAAGGLVVQRSLQRFLPGTAVDGDVDRVVDAVADH
VTVFLLALDGRPGQAQAHRRELGVVHRADPGRVTLEFDADRQFVFHGGHTGNVFLVHRARTELPGHSGEVHR
AVRRQQRRIVQVDRTAVDATVELAFAQCQENLRPRDRAHRVRHLHRLARLLAATLVARDGLVHDVPSGKKTP
AHGGPVTALPATAGPRHRCRR*
AnnotationID:7191GeneID:7191
AnnotatorUID: diggins
Modification Date/Time: 2005-03-29 14:02:49
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16922
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31450
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50193How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6512327Stop: 6509022
Length: 3306
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGAGAGGTGGTCTGGATGTTCGCCTCGTTGGTATCGGTGCGCGCGCTGACGGTATCCACCCGCTGCCCCAG
GGCGCTGTCCGCGTTGGCACGGACGGTCTGTTCGGTGCTGATCGCCGAGGCGTTGCTCGCAACCTGGCCGGT
GAGCTGATCCAGCCGCTGGACGGTTACAGCATTGTTCGACGCAACGACCGACTCGACGGTTGCGATCCTGCC
CTCCGCCGTCCCGGTCCACGCCTCAAGCAAGCTCGTCCGCTTCGCCTGCGCTTCGTCCTCGTTCGCCCGCAC
GGTGACTTCGGTGGCAGCTCGAGCAATGGTGTCCCAGCCCTTCAGCGCATCCGCCTTCTCTCCGGTCGCCGG
TTCCCCGCGGGCGGCAGCTTGCAGCACATCCAGATTCGATGCCGCTGCTTCGATCCTGCCGTCGAGTTCGCT
GATTTCAGCGGTATGGCTCGCCACCTGCTGCGCCAGCCCGTTGGCAGTTTCCAGCGACTGGCCGATATCGGA
CCAGTAGGCCGCGTTCGGCGGCGCCGTCTTCGCCGGCACAGCCTTCAGTGCCTGGTACAACCGCTGCCCCTG
TCGCACCATTTCGTTCTTCGCGTAGACCTTGGTCGGGTCGTACAGCAAAACGTCGGCGAGGTCGCCGACCTG
CTTCTGCAAGCCCCCGATATCCACCTGCATCCGCTCGATATCGGAGAAGAATTGCTGGCCCAGCGCCGACTC
GACGTACTCCTGGGTGATCAACTGGTTGTATTCGCTGGCGTCGCTGGAGCTGGTGCCGGTGACCCAGTTCGA
CCAGGCGCCGACGTTGCCGCTACGGTCGATCAAGCGACCGCGGAACGCCAGCCGTTCGCCGGCCGGTATCGG
CGATACCAGGTGGGTATTGCCTGGGTAGGCGAACAGGCCCAGCGCCCGTGCGGTCTCCTCGCTGCCGCCGGG
CGTGGCGGACTGCTGGATCTCGGTGTAGGCGGTGTCCGCTGCGCCGCTGGCCGGGAACCCCCACTCCAGGCC
GATGCGCCAGGGGCCGGCCACGCAGCGCAGGTAGGCCAGCGCCGGCGGCGGCGTGGTCTTGCCCTCAAGAGC
GGTCTCCACACTGCTGGCGTAGACCGAGCCGACCTCCATCACGTTCAAGGCGCGTACCCGCACCAGATAGCG
ACCGGCATAGATGCCCGGCACGTCGAAACCGAGCGCCGAGGTTCGCGGCACCCGCACCCAGTTGCCCGAGTC
CTTGCGCCATTCGGCCTCGTAGGCCACCGCGTTCGGCGCGGCATCCCAGGAGGCCGACAGGCTGGTCACCGC
CAACCCCTGGTCGACCTTGGTGAAAGCCTTGATCCGCACGTTCTGCGGCGGCGCCTGCACGCCCGGCGGAAT
GCTGGTGACCGGCGGCAGCTCGATGCGCGCACCGTTGTCGATGGCGTCGAACTTGCTCGCGTTGTGTTGCAG
CGCGGTGATCTCGAAAAGATTGTCCTCCGGCCGGGTGATGCTCATGATGCGGAAGCGCTGGGTGGTCAGGCT
GTTGCTCTGCAGCGCCCACTGCCCCTGGGGCCGAGGCGTCTCCGAATAGGCGGCGGTCACGGTCAGCACGCG
GCCTACCACCGACTGGACGCTGCGCGCCTCGGCCTTGCCGTTCGGCAGGTTGACCAGCAGGCGATCGCCGGG
TCGGGCCTCGACGTCGCGGTCGAGGGTCAGCGCGCGGCCATCCACCGCGCTCAGGCGTCCGCCGATCTGCTT
GCCGGACTTGACCGGGTCGGCTACGGCGATGATCTTCCCCGGCGCCAGCCCACGGCCATCCATGCCGGTGCG
GAAGGTCACCGCGTCCTGCTCCAGCTCCTCGGTCAGCAGCGCCCACTGGCCACGCCGCTGCGCCTCGCCCTC
GGAGGTGCAACCGATCGCGGTGATCTCCAACTGGCTGATGCCGTAGCGGCGCTGCGCGCGGTCATTGTTCAC
CGCTACCGGTTGGCTCTGGTAACCGTTGCCCGGATTGTCGTAGTTGACCAGGGCCAGGGTGTGGCGATCGCG
CTGGCGGCTGCTGCTGTAGTTGAAGTGGCTGCCGTCGTCGCCACGCACGGTGTTCGACGGCGAGAAGGTGTA
GGCCTCGTCCTCCGGCATGTCGGATACCGCCACCATTTCCGCGCCGGACCAGTAGGACATGCCGCGGAAGAT
CGCTGCCAGGTCGCGCAGCACGGTCCAGGCTTCGGCGCGACTCTGCAGGTACAGGTTGCAGCTGAAGCGCGG
CTCCTGGCCGCCCTTGCCGTCGGGCACCGACTGGTCGCAGTACTGGGCGATGCGGTACAGCGACCACTTGTC
GACCATGCTCGCGTCGATCCGCCGACCGAGGCCGAAGCGCTTGTGCAACACGATGTCGTACCAGTGCCAGGC
CGGGTTGCTGGTCCAGGCCGACTTGAACGAGCCGTCCCAGGTGCCGCTGTAGCTACGGGTCTGCGGATCGTA
GTTGCTCGGCACCCGCACCCGCCGGCCGCGCGCTTCCACCGATATCTGCGGAATGCTCTGGAACTGGCTGGC
ATCGAACTCGACGAACAGCAGCGCGGTGTTCGGGTAGCGCAGCTTGGCGTCGATCACCTCGGTGATCGCCTC
CACCCGCATGGTGTCGGCGACGCGGTTGTTGTTCTGGTTCGGCGTCAGGCGGCGCACGCGCACCTGCCAGCC
GCTCCGCGCCTCCGGCAGGTCGACACGGTGGGAGCGCTCGTAGCGGCTGGTGGACTTGTCGTCCAGCGAAGC
CTTCAGCGCTTCCTGCCAGGCACCGCCGTCGACGGCGATGTCGATCGCGTAGTCGATGCGGTAGCCGACCAC
GTCACCGTTTTCCTGCTGGCGCTGGATGGCCGGCCAGGACAGGCGCAGGCGCACCGCCGAGAGCTGGGTGTT
GTTCACCGCGCGGACCCAGGGCGCGTCACTCTTGAGTTCGACGCCGACCGCCAGTTCGTTTTCCACGGCGGG
CACACCGGCAATGTGTTCCTGGTCCACCGAGCCCGGACGGAACTCCCAGGTCACTCCGGGGAAGTTCACCGA
GCCGTCCGCCGCCAGCAGCGGCGTATCGTCCAGGTAGATCGAACGGCCGTCGACGCCACCGTCGAACTCGCC
TTCGCCCAGTGCCAGGAGAATCTTCGCCCGCGCGATCGAGCGCACCGAGTCCGGCATCTCCACCGGCTGGCG
CGGCTTCTTGCTGCCACCCTTGTGGCCCGTGATGGTCTTGTTCATGACGTTCCTTCAGGCAAAAAAACGCCC
GCGCATGGCGGGCCTGTTACGGCGTTGCCGGCTACAGCCGGTCCTCGGCATAGATGCCGGCGCTGA