ViewGene

Locus Name:
GeneID:
Location:

GeneID:7184
TrivialName: PA14_07720
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_07720
PAO1 Ortholog Locus:
Sequence Length:1458
Protein Length:485
Start: 662982
Stop: 664439
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAN78558.1|AE016755_58 (AE016755) Hypothetical protein [Escherichia coli CFT073]
Identities = 33/98 (33%), Positives = 53/98 (54%)
Sequence:
GTGCAGCGCTCCCGGTACGGCCAGGCGAAACACCGGGATCGCGGCGTCGAAGGCGATTCCGTCGCTGCCGAG
CATCTGGTAGCTGCCGCGCATGCTGCCGACCCGGGTCGCCAGCACCGTGCCGCTGGTGTAGGTGTGTTGCGC
GCCGGGGGCGATCAGCGGTTGCTCGCCGACCACGCCGGCGCCGCGAACTTCCTGGGTACGGCCGTCGCCGTC
GGTGATGATCCAGTGGCGCGACAGCAGTTGGGCCGGAACCTCGCCCTGGTTCTCGATGGTCACAGTGTAGGC
GAAGGCGAAACGGTTCTGCTCCGGGGCGGACTGTTCCGGAAGGTAGCGGGTGTCGACCCTGACGTTGACCTG
GTGCTGGGTATCGCTCATACGGCTTGCCTGATTCCTGACGAGTGTCTCACCAGACTAACGATTGCCTGGCAG
CTCGGCCAGCCGGTTGGCCAGGCGGACGAATGCGGCCAGGTCGAGTTGTTCGGGACGAAGGGTCGGATCGAC
CTCTGCGGCCTCGATGTCCTCGACGCTCAGGAGAGGCTTGAGGGTGTTGCGCAGGGTCTTGCGGCGCTGGTT
GAAGGCCTCGCGGACCACCCGTTCGAGCAGTTTCGGATCGCGTGCCGGATGGGGCGGCTCGGCGAAGGGGGT
GAGGCGGACGATGGCCGAGTCGACCTTGGGCGGCGGGTTGAACGCGCCGGGGCCGACGTTGAACAGGTGCTC
CACCCGACAGTGATACTGGACCATGATCGAGAGCCGGCCCCAGTCCCCGCCGCCCGGCGTGGCCGCCAGGCG
CTCGACCACTTCCTTCTGCAGCATGAAGTGCATGTCCTCGATCACCGGCGCGTGCTCCAGCAGATGGAAGAT
CAGTGGCGTGGAGATGTTGTAGGGCAGGTTGCCGACCACTCGCAACTTCTCGCCGCTCTCCACCAGCGAGGC
GAAATCGAACTTGAGGGCGTCGCCCTGGTGCAGGCTGAAGCGCGACTCGAGGCCGAATTTCAGCTTCAACAG
GGGGATCAGGTCCTGGTCGAGCTCGATCACGTCCAGGCGTGCGCCGCTGCCCAGCAGTCCCTCGGTCAGGGC
ACCCTGGCCCGGGCCGATCTCCAGCAGGCGCTGACCCTCGCGGGCATGGATGGCACGGAGGATGCGGTGAAT
CACCCCGGCATCGTGCAGGAAGTTCTGGCCGAAGCGCTTGCGCGCGCGGTGTTGGTAAAGCTCGGACATTGG
AAACGGTTCCAGGCTGCGGGCCCCAGGCCAAGGCGGGAGGCGCGGATGCGAAAGGGCGCTATTTTAACAGCG
AAGCGTCGGGCCGGCAGGGCTAAACGATGGCCGACCGCCGTCAGCAGCGGCTGGCCGCCATCTGGTAGGCGG
TTTCCAGGGCCACCTGCAGGCTGCCGCTATCGATGCGGCCGCTTCCGGCCAGGTCGAGGGCGGTACCGTGGT
CGACAGAGGTGCGGATGA
Translation:
MQRSRYGQAKHRDRGVEGDSVAAEHLVAAAHAADPGRQHRAAGVGVLRAGGDQRLLADHAGAANFLGTAVAV
GDDPVARQQLGRNLALVLDGHSVGEGETVLLRGGLFRKVAGVDPDVDLVLGIAHTACLIPDECLTRLTIAWQ
LGQPVGQADECGQVELFGTKGRIDLCGLDVLDAQERLEGVAQGLAALVEGLADHPFEQFRIACRMGRLGEGG
EADDGRVDLGRRVERAGADVEQVLHPTVILDHDREPAPVPAARRGRQALDHFLLQHEVHVLDHRRVLQQMED
QWRGDVVGQVADHSQLLAALHQRGEIELEGVALVQAEARLEAEFQLQQGDQVLVELDHVQACAAAQQSLGQG
TLARADLQQALTLAGMDGTEDAVNHPGIVQEVLAEALARAVLVKLGHWKRFQAAGPRPRREARMRKGAILTA
KRRAGRAKRWPTAVSSGWPPSGRRFPGPPAGCRYRCGRFRPGRGRYRGRQRCG*
AnnotationID:7184GeneID:7184
AnnotatorUID: diggins
Modification Date/Time: 2005-03-29 09:09:42
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16913
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31437
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50186How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6464325Stop: 6465782
Length: 1458
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCAGCGCTCCCGGTACGGCCAGGCGAAACACCGGGATCGCGGCGTCGAAGGCGATTCCGTCGCTGCCGAG
CATCTGGTAGCTGCCGCGCATGCTGCCGACCCGGGTCGCCAGCACCGTGCCGCTGGTGTAGGTGTGTTGCGC
GCCGGGGGCGATCAGCGGTTGCTCGCCGACCACGCCGGCGCCGCGAACTTCCTGGGTACGGCCGTCGCCGTC
GGTGATGATCCAGTGGCGCGACAGCAGTTGGGCCGGAACCTCGCCCTGGTTCTCGATGGTCACAGTGTAGGC
GAAGGCGAAACGGTTCTGCTCCGGGGCGGACTGTTCCGGAAGGTAGCGGGTGTCGACCCTGACGTTGACCTG
GTGCTGGGTATCGCTCATACGGCTTGCCTGATTCCTGACGAGTGTCTCACCAGACTAACGATTGCCTGGCAG
CTCGGCCAGCCGGTTGGCCAGGCGGACGAATGCGGCCAGGTCGAGTTGTTCGGGACGAAGGGTCGGATCGAC
CTCTGCGGCCTCGATGTCCTCGACGCTCAGGAGAGGCTTGAGGGTGTTGCGCAGGGTCTTGCGGCGCTGGTT
GAAGGCCTCGCGGACCACCCGTTCGAGCAGTTTCGGATCGCGTGCCGGATGGGGCGGCTCGGCGAAGGGGGT
GAGGCGGACGATGGCCGAGTCGACCTTGGGCGGCGGGTTGAACGCGCCGGGGCCGACGTTGAACAGGTGCTC
CACCCGACAGTGATACTGGACCATGATCGAGAGCCGGCCCCAGTCCCCGCCGCCCGGCGTGGCCGCCAGGCG
CTCGACCACTTCCTTCTGCAGCATGAAGTGCATGTCCTCGATCACCGGCGCGTGCTCCAGCAGATGGAAGAT
CAGTGGCGTGGAGATGTTGTAGGGCAGGTTGCCGACCACTCGCAACTTCTCGCCGCTCTCCACCAGCGAGGC
GAAATCGAACTTGAGGGCGTCGCCCTGGTGCAGGCTGAAGCGCGACTCGAGGCCGAATTTCAGCTTCAACAG
GGGGATCAGGTCCTGGTCGAGCTCGATCACGTCCAGGCGTGCGCCGCTGCCCAGCAGTCCCTCGGTCAGGGC
ACCCTGGCCCGGGCCGATCTCCAGCAGGCGCTGACCCTCGCGGGCATGGATGGCACGGAGGATGCGGTGAAT
CACCCCGGCATCGTGCAGGAAGTTCTGGCCGAAGCGCTTGCGCGCGCGGTGTTGGTAAAGCTCGGACATTGG
AAACGGTTCCAGGCTGCGGGCCCCAGGCCAAGGCGGGAGGCGCGGATGCGAAAGGGCGCTATTTTAACAGCG
AAGCGTCGGGCCGGCAGGGCTAAACGATGGCCGACCGCCGTCAGCAGCGGCTGGCCGCCATCTGGTAGGCGG
TTTCCAGGGCCACCTGCAGGCTGCCGCTATCGATGCGGCCGCTTCCGGCCAGGTCGAGGGCGGTACCGTGGT
CGACAGAGGTGCGGATGA