ViewGene

Locus Name:
GeneID:
Location:

GeneID:7182
TrivialName: PA14_07640
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_07640
PAO1 Ortholog Locus:
Sequence Length:1749
Protein Length:582
Start: 656476
Stop: 658224
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGTGGCTGGCGCAGGTGGCCAGGACGAGGCAGAGCAGGACGATGGCGAACAGGCGCATGGCGGCTCCCGTG
GACGGCCGGCTTCTTGTTCTGCTGTGGGCGGCCCCGACCGTGCCGGCATGCTGGCCGGCGGTCGGGGCGGAC
GTCAACCGATCAAATGGGCGGGATGATCAGGTCCAGGCGCGGGTAGCCTTCCTCGCCCTCGCTGGCGCCCTT
GGGCGGCATGTGGTGGGTCTGCACGAGCTGGTCGCCCTGCAGGGTCTCCAGGTGGATATCGAAGCCCCACAA
GCGATGCAGGTGCTTGAGCACGTCGGCGGTGGAGTCGCTCAGCGGCTGGCGGTCGAACTGCTGGTGGCGCAG
GGTCAGCGAGCGGTCGCCGCGACGGTCGACGTTCCAGATCTGGATGTTCGGCTCGCGGTTGCCGAGGTTGTA
CTGCGCCGCCAGGGTCTCGCGGATGGTGCGGTAGCCGGCTTCGTCGTGGATCGCCGCGACCAGCAGGTCGTC
CTTCTGGTCGTCGTCGAGAATGCTGAACAGCTTCAGGTCGCGAATCACCTTGGGCGAGAGGAACTGCAGGAT
GAAGCTTTCGTCCTTGAAGCTCTTCATGGCGAACTTCAGCGTGGCCAGCCAGTCGCTGCCGGCGATATCCGG
GAACCAGCGGCGGTCCTCGTCGGTAGGTTCCTCGCAGATGCGGCGGATGTCGCGGTACATGGCGAAGCCCAG
GGCGTAGGGGTTGATGCCGCTGTAGTAGGGGCTGTCGAAGGACGGCTGGTAGACCACGCTGGTGTGGTATTG
CAGGAACTCCATCATGAAGCCGTCGTTGACCAGGCCTTCGTCGTAGAGGTCGTTGAGCAGCGTGTAGTGCCA
GAAGGTCGCCCAGCCTTCGTTCATCACCTGGGTCTGGCGTTGCGGGTAGAAATACTGGGCGATCTTGCGCAC
GATGCGGATCACCTCGCGCTGCCAGGGCTCCAGAAGCGGCGCGTTCTTCTCGATGAAGTAGAGGATGTTCTC
CTGCGGCTCGCTCGGATAGCGCGCCATGGATTGTTCCTTGTCCTTGCCGCCGACGCGCGGGATGGTCCGCCA
GAGGTCGTTGACCTGGCGCTGGATCAGTTCCTCGCGCTCCTTCTGCCGCTGCCGCTCCTCTTCCGCGGAAAT
CGGGTAGGGCCGCTTGTAGCGGTCGACACCGTAGTTCATCAGGGCGTGGCAGGAGTCGAGCAGGTCTTCCAC
CGCGTCGATCCCGTAGCGCTCCTCGCACTGCATGATGTACTGCTTGGCGAACACCAGGTAATCGATGATCGA
ACTGGCATCGGTCCAGGTGCGGAACAGGTAGTTGCCCTTGAAGAAACTGTTGTGCCCGTAGCAGGCGTGGGC
GATCACCAGCGCCTGCATGCACTGGGTGTTTTCCTCCATCAGGTAGGCGATGCAGGGGTCGGAGTTGATCAC
GATCTCGTAGGCCAGGCCCATCTGGCCACGCTTGTAGTTCTTTTCCGTACTGAGGAAGTGCTTGCCGTAGGA
CCAGTGGTTATAGCCGATCGGCATGCCCACCGAGGCGTAGGCGTCCATCATCTGCTCGGCGGTGATCACCTC
GATCTGGTTCGGATAGGTATCCAGGGCATAGCGCTCGGCGATCCTGCTGATTTCCCGGTCGTACTGCTGGAT
CAGCTCGAAGGTCCATTCCGAGCCGGTGGCGATGGGCTGGCGCTTGCTCATGCGACGAGCCTCCTCTGGAAC
AGCTCGCGGAACACCGGGTAG
Translation:
MWLAQVARTRQSRTMANRRMAAPVDGRLLVLLWAAPTVPACWPAVGADVNRSNGRDDQVQARVAFLALAGAL
GRHVVGLHELVALQGLQVDIEAPQAMQVLEHVGGGVAQRLAVELLVAQGQRAVAATVDVPDLDVRLAVAEVV
LRRQGLADGAVAGFVVDRRDQQVVLLVVVENAEQLQVANHLGREELQDEAFVLEALHGELQRGQPVAAGDIR
EPAAVLVGRFLADAADVAVHGEAQGVGVDAAVVGAVEGRLVDHAGVVLQELHHEAVVDQAFVVEVVEQRVVP
EGRPAFVHHLGLALRVEILGDLAHDADHLALPGLQKRRVLLDEVEDVLLRLARIARHGLFLVLAADARDGPP
EVVDLALDQFLALLLPLPLLFRGNRVGPLVAVDTVVHQGVAGVEQVFHRVDPVALLALHDVLLGEHQVIDDR
TGIGPGAEQVVALEETVVPVAGVGDHQRLHALGVFLHQVGDAGVGVDHDLVGQAHLATLVVLFRTEEVLAVG
PVVIADRHAHRGVGVHHLLGGDHLDLVRIGIQGIALGDPADFPVVLLDQLEGPFRAGGDGLALAHATSLLWN
SSRNTG*
AnnotationID:7182GeneID:7182
AnnotatorUID: diggins
Modification Date/Time: 2005-03-29 08:08:26
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:14000
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31433
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50184How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6457819Stop: 6459567
Length: 1749
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGTGGCTGGCGCAGGTGGCCAGGACGAGGCAGAGCAGGACGATGGCGAACAGGCGCATGGCGGCTCCCGTG
GACGGCCGGCTTCTTGTTCTGCTGTGGGCGGCCCCGACCGTGCCGGCATGCTGGCCGGCGGTCGGGGCGGAC
GTCAACCGATCAAATGGGCGGGATGATCAGGTCCAGGCGCGGGTAGCCTTCCTCGCCCTCGCTGGCGCCCTT
GGGCGGCATGTGGTGGGTCTGCACGAGCTGGTCGCCCTGCAGGGTCTCCAGGTGGATATCGAAGCCCCACAA
GCGATGCAGGTGCTTGAGCACGTCGGCGGTGGAGTCGCTCAGCGGCTGGCGGTCGAACTGCTGGTGGCGCAG
GGTCAGCGAGCGGTCGCCGCGACGGTCGACGTTCCAGATCTGGATGTTCGGCTCGCGGTTGCCGAGGTTGTA
CTGCGCCGCCAGGGTCTCGCGGATGGTGCGGTAGCCGGCTTCGTCGTGGATCGCCGCGACCAGCAGGTCGTC
CTTCTGGTCGTCGTCGAGAATGCTGAACAGCTTCAGGTCGCGAATCACCTTGGGCGAGAGGAACTGCAGGAT
GAAGCTTTCGTCCTTGAAGCTCTTCATGGCGAACTTCAGCGTGGCCAGCCAGTCGCTGCCGGCGATATCCGG
GAACCAGCGGCGGTCCTCGTCGGTAGGTTCCTCGCAGATGCGGCGGATGTCGCGGTACATGGCGAAGCCCAG
GGCGTAGGGGTTGATGCCGCTGTAGTAGGGGCTGTCGAAGGACGGCTGGTAGACCACGCTGGTGTGGTATTG
CAGGAACTCCATCATGAAGCCGTCGTTGACCAGGCCTTCGTCGTAGAGGTCGTTGAGCAGCGTGTAGTGCCA
GAAGGTCGCCCAGCCTTCGTTCATCACCTGGGTCTGGCGTTGCGGGTAGAAATACTGGGCGATCTTGCGCAC
GATGCGGATCACCTCGCGCTGCCAGGGCTCCAGAAGCGGCGCGTTCTTCTCGATGAAGTAGAGGATGTTCTC
CTGCGGCTCGCTCGGATAGCGCGCCATGGATTGTTCCTTGTCCTTGCCGCCGACGCGCGGGATGGTCCGCCA
GAGGTCGTTGACCTGGCGCTGGATCAGTTCCTCGCGCTCCTTCTGCCGCTGCCGCTCCTCTTCCGCGGAAAT
CGGGTAGGGCCGCTTGTAGCGGTCGACACCGTAGTTCATCAGGGCGTGGCAGGAGTCGAGCAGGTCTTCCAC
CGCGTCGATCCCGTAGCGCTCCTCGCACTGCATGATGTACTGCTTGGCGAACACCAGGTAATCGATGATCGA
ACTGGCATCGGTCCAGGTGCGGAACAGGTAGTTGCCCTTGAAGAAACTGTTGTGCCCGTAGCAGGCGTGGGC
GATCACCAGCGCCTGCATGCACTGGGTGTTTTCCTCCATCAGGTAGGCGATGCAGGGGTCGGAGTTGATCAC
GATCTCGTAGGCCAGGCCCATCTGGCCACGCTTGTAGTTCTTTTCCGTACTGAGGAAGTGCTTGCCGTAGGA
CCAGTGGTTATAGCCGATCGGCATGCCCACCGAGGCGTAGGCGTCCATCATCTGCTCGGCGGTGATCACCTC
GATCTGGTTCGGATAGGTATCCAGGGCATAGCGCTCGGCGATCCTGCTGATTTCCCGGTCGTACTGCTGGAT
CAGCTCGAAGGTCCATTCCGAGCCGGTGGCGATGGGCTGGCGCTTGCTCATGCGACGAGCCTCCTCTGGAAC
AGCTCGCGGAACACCGGGTAG