ViewGene

Locus Name:
GeneID:
Location:

GeneID:7181
TrivialName: PA14_07610
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_07610
PAO1 Ortholog Locus:
Sequence Length:1392
Protein Length:463
Start: 654716
Stop: 656107
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGCGTGGCCAGGCGTTGACTCCCGAAGCGCTGCTTCAGGCCTTTCCGCGTTCTTCCTTGTAGGCCTTGAG
TGCGGCGAGGCGCGCACGCTTCAGCGCCTCGCCCAGTTCCGCGCCCTTCAAGCCCTTTTCCACCAGCGGCTT
CACGCTGACTGCCCGCGCTGCCTGCGCCGCGCCGAGCAGGTAGGCGGCCTGCGGATAGTCCCGCTGTTCCAG
GCCGAGGCGGCCGCGCGCGTCCATCTCGCTGGCGGCGACGAACTCCTCGAAACGCTGCGGGCGGCGATACAC
GTCGAAGCTCTGCAACAGCTCCAGCAGTGTATTAGGGCGCAGCTCCAGCGCCCGATGGGCGTGGGTGTGGTA
CTCGCCCACCAGGCGCGCCAGTTCCTGGCAGTCGCGCGGCACCCTGAAGCGCTGGTTCACCGCATCGATCAA
CGGCACGCCGCGAGCCTCGTGGGCGATATGGCGGGGCCAGTCCGCTTCGCTGGTGAGTCCCTTGCCCAGGTC
GTGCAGGAGGCAAGCCCAGCGTACGCTGAGCGGCTGCCGGTGGCGGGCGCATTGCTGCAATACCGACAGGAC
ATGGACGCCGGTATCGATTTCCGGATGGTGGGCCGCCGGCTGCGGTACGCCGAACAGCGCCTCGACTTCCGG
GATCAGTTCGGCCAGGGCGCCGCAGTCGTGCAGGACCTGGATGAAGACCTCGGGGTTGGGTTCCATCAGGGC
TCGGGAAATTTCCTTCCAACTGCGCTCCGGGGTCAGCGCCTGCAACTCGCCGGATTCCGCCAGTTGGCGCAT
CAGGGCGAGGGTTTCGGCGGCGATCCGGAAGCCCAGGCCGGCGTAGCGGGCGGCGAAGCGCGCTACGCGCAG
GACCCGCAGGGGATCCTCGGCGAACGCCGGGGAAACGTGGCGCAGCAGGCGCGCCTCGAGGTCTGCCTGGCC
GCCGTAGGGATCTATTACCCGGCCCTGTTCGTCCTCGGCCATGGCGTTGATGGTCAGGTCACGGCGAGTCAG
GTCTTCCTCCAGGGTCACCTCGGGGCTGGCATGGAAGGTGAAGCCGCCGTAGCCGCGCCCGCTCTTTCGCTC
GGTGCGCGCCAGGGCGTATTCCTCGCCGCTCTGCGGATGAAGGAAGACCGGGAAGTCGGCGCCCACCGGGCG
GTAGCCGCGGGCGAGCATCTCGTCGCTGCTGGCACCGACCACCACCCAGTCGATATCGGTGACCGGACGGCC
GAGAAGGCGATCGCGCACGGCGCCGCCGACCTTGTAAATCTGCATGGGAATCCTCCGCGTGATAGGCGGAAG
TCTACCCCAGGGTGTCCTAGCGGGCGCGTGGAAGCTGCCGGAGCAGGGCGCCGACCACCAGTTCGAGCTGTT
CCGGATTGGCCCTGGCGGGGCTGA
Translation:
MAWPGVDSRSAASGLSAFFLVGLECGEARTLQRLAQFRALQALFHQRLHADCPRCLRRAEQVGGLRIVPLFQ
AEAAARVHLAGGDELLETLRAAIHVEALQQLQQCIRAQLQRPMGVGVVLAHQARQFLAVARHPEALVHRIDQ
RHAASLVGDMAGPVRFAGESLAQVVQEASPAYAERLPVAGALLQYRQDMDAGIDFRMVGRRLRYAEQRLDFR
DQFGQGAAVVQDLDEDLGVGFHQGSGNFLPTALRGQRLQLAGFRQLAHQGEGFGGDPEAQAGVAGGEARYAQ
DPQGILGERRGNVAQQARLEVCLAAVGIYYPALFVLGHGVDGQVTASQVFLQGHLGAGMEGEAAVAAPALSL
GARQGVFLAALRMKEDREVGAHRAVAAGEHLVAAGTDHHPVDIGDRTAEKAIAHGAADLVNLHGNPPRDRRK
STPGCPSGRVEAAGAGRRPPVRAVPDWPWRG*
AnnotationID:7181GeneID:7181
AnnotatorUID: diggins
Modification Date/Time: 2005-03-29 08:08:32
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13999
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31431
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50183How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6456059Stop: 6457450
Length: 1392
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCGTGGCCAGGCGTTGACTCCCGAAGCGCTGCTTCAGGCCTTTCCGCGTTCTTCCTTGTAGGCCTTGAG
TGCGGCGAGGCGCGCACGCTTCAGCGCCTCGCCCAGTTCCGCGCCCTTCAAGCCCTTTTCCACCAGCGGCTT
CACGCTGACTGCCCGCGCTGCCTGCGCCGCGCCGAGCAGGTAGGCGGCCTGCGGATAGTCCCGCTGTTCCAG
GCCGAGGCGGCCGCGCGCGTCCATCTCGCTGGCGGCGACGAACTCCTCGAAACGCTGCGGGCGGCGATACAC
GTCGAAGCTCTGCAACAGCTCCAGCAGTGTATTAGGGCGCAGCTCCAGCGCCCGATGGGCGTGGGTGTGGTA
CTCGCCCACCAGGCGCGCCAGTTCCTGGCAGTCGCGCGGCACCCTGAAGCGCTGGTTCACCGCATCGATCAA
CGGCACGCCGCGAGCCTCGTGGGCGATATGGCGGGGCCAGTCCGCTTCGCTGGTGAGTCCCTTGCCCAGGTC
GTGCAGGAGGCAAGCCCAGCGTACGCTGAGCGGCTGCCGGTGGCGGGCGCATTGCTGCAATACCGACAGGAC
ATGGACGCCGGTATCGATTTCCGGATGGTGGGCCGCCGGCTGCGGTACGCCGAACAGCGCCTCGACTTCCGG
GATCAGTTCGGCCAGGGCGCCGCAGTCGTGCAGGACCTGGATGAAGACCTCGGGGTTGGGTTCCATCAGGGC
TCGGGAAATTTCCTTCCAACTGCGCTCCGGGGTCAGCGCCTGCAACTCGCCGGATTCCGCCAGTTGGCGCAT
CAGGGCGAGGGTTTCGGCGGCGATCCGGAAGCCCAGGCCGGCGTAGCGGGCGGCGAAGCGCGCTACGCGCAG
GACCCGCAGGGGATCCTCGGCGAACGCCGGGGAAACGTGGCGCAGCAGGCGCGCCTCGAGGTCTGCCTGGCC
GCCGTAGGGATCTATTACCCGGCCCTGTTCGTCCTCGGCCATGGCGTTGATGGTCAGGTCACGGCGAGTCAG
GTCTTCCTCCAGGGTCACCTCGGGGCTGGCATGGAAGGTGAAGCCGCCGTAGCCGCGCCCGCTCTTTCGCTC
GGTGCGCGCCAGGGCGTATTCCTCGCCGCTCTGCGGATGAAGGAAGACCGGGAAGTCGGCGCCCACCGGGCG
GTAGCCGCGGGCGAGCATCTCGTCGCTGCTGGCACCGACCACCACCCAGTCGATATCGGTGACCGGACGGCC
GAGAAGGCGATCGCGCACGGCGCCGCCGACCTTGTAAATCTGCATGGGAATCCTCCGCGTGATAGGCGGAAG
TCTACCCCAGGGTGTCCTAGCGGGCGCGTGGAAGCTGCCGGAGCAGGGCGCCGACCACCAGTTCGAGCTGTT
CCGGATTGGCCCTGGCGGGGCTGA