ViewGene

Locus Name:
GeneID:
Location:

GeneID: 7179

TrivialName: PA14_07510

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_07510

PAO1 Ortholog Locus:

Sequence Length: 2088

Protein Length: 695

Start: 647083

Stop: 649170

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAN82265.1|AE016767_25 (AE016767) Hypothetical protein [Escherichia coli CFT073] Identities = 129/241 (53%), Positives = 163/241 (67%)

Sequence:

ATGAGGCGGTCTCGCGGTGGACGGGAATATAAGCGGAAGTGTAGACGCCGGGCGGCGGGGCAAGCGGCAAAG
AAAAACCCCCGGTTTTTCAGGCCGGGGGTTCGTTCGTCACTCGTCGAGGAAGGAGCGCAGGTGCTCGCTTCG
CGACGGATGGCGCAGCTTGCGCAACGCCTTGGCTTCGATCTGGCGGATCCGCTCGCGGGTCACATCGAACTG
CTTGCCGACTTCCTCGAGGGTGTGGTCGGTGTTCATGTCGATGCCGAAGCGCATGCGCAGCACCTTGGCTTC
CCGGGCAGTGAGGCCGGCGAGGACTTCGCGGGTGGATTCCTTGAGGCTCTCGCTGGTCGCCATCTCGATCGG
CGACTGCATGGTGGAGTCCTCGATGAAATCGCCCAGGTGCGAATCTTCGTCGTCACCGATCGGGGTTTCCAT
GGAGATCGGCTCTTTGGCGATCTTCAGTACCTTGCGGATCTTGTCCTCAGGCATGTCCATGCGCTCGCCAAG
CTCTTCCGGGGTGGGCTCGCGACCCATTTCCTGGAGCATCTGGCGGGAGATGCGGTTGAGCTTGTTGATCGT
CTCGATCATGTGCACCGGGATGCGGATGGTGCGTGCCTGGTCGGCGATCGAACGGGTGATCGCCTGGCGAAT
CCACCAGGTGGCGTAGGTAGAGAATTTGTAGCCACGACGGTATTCGAACTTGTCCACCGCCTTCATCAGGCC
GATGTTGCCTTCCTGGATCAGGTCGAGGAATTGCAGGCCGCGGTTGGTGTACTTCTTGGCGATGGAAATCAC
CAGGCGCAGGTTGGCCTCGACCATTTCCTTCTTCGCCCGGCGAGCCTTGGCTTCGCCGATCGACATCGCGCG
GTTGATTTCCTTGATCTCGGCGACGGTCAGCTCGACCTCGCTTTCCAGGGCCGCCAGCTTCTGCTGGTTGCG
CAGGATGTCGTCGCGCAGGCGCTCGATGGCCTCGGCGTACTTCGGCTTGCTCTTCAGGACGCTGTCGACCCA
CTTCTCGTCGGTCTCGTGGTTCGGGAACAGGCGCAGGAAGTCGGCACGCGGCATGCGCGCGTCACGCACGCA
GAGTTGCATGATGGCGCGTTCCTGGGCGCGTACGCCTTCCAGGGCGGAGCGCACGCGGGCGACCAGGGCGTC
GAACTGCTTGGGCACCAGCTTGATCGGCATGAACAGCTCGGCCAAGCCGGTGAGTTCGGCGGTGGCCTGCTT
GCTGCCGCGACCGTGCTTCTTCAGGGCCTTCTTGGCCTTGTCGAGCTGCTCGGAGACCGCGGTGAAACGCAG
GCGGGCTTCTTCCGGATCCGGACCGCCGTCGCCTTCGTCGTCGCTGTCGCTGCTGTCGTCGCTTTCTTCTTC
CTCGTCGTCCTTCTCTTTCGAGTCGGCGGAATCGTCCTTCAGGTTGACCGGCTCCACCTCTTCGGCGGGCAG
GCTGCCGTCATCGGGATCGATATAGCCGCTGAGGACGTCGGAGAGGCGACCGCCTTCGGCGACGATGCGATT
GTAGTCGGCCAGGATGCTGTCCACCGTGCCCGGGAACTGGGCGATGGCGCTCATCACTTCGCGGATGCCTTC
CTCGATGCGCTTGGCGATTTCGATCTCGCCTTCGCGGGTCAGCAGTTCCACGGTACCCATTTCACGCATGTA
CATGCGCACCGGGTCGGTGGTGCGACCGATGTCGCTTTCCACCGCGGCCAGGGCCGCTGCGGCTTCTTCCGC
TGCGGCTTCGTCGGTATCCGCCTCGGCCAGCAACAGGGCATCCGCATCCGGGGCTGTCTCGAATACGTTGAT
CCCCATGTCGTTGATCATGCGGATGATGTCTTCCACCTGTTCCGGATCGGAAATATCCTCCGGCAGGTGGTC
GTTGACCTCCGCGTAAGTCAGGTATCCCTGCTCACGGCCTCGGGCGATCAACTCTTTCAGACGAGATTGCTG
TTGCGCTTTTCCGGACATAACACCCTATCCACTGAAGGTCTTGGCGGGCAAAAAATAAGCAGAGGATTATAC
CTGATGCCTGGGCTGAGGCGCCAGTTCAGCTCTGGGAAGGCGATGAAGCGGCAACACTGTAGTGCTCTCTGA

Translation:

MRRSRGGREYKRKCRRRAAGQAAKKNPRFFRPGVRSSLVEEGAQVLASRRMAQLAQRLGFDLADPLAGHIEL
LADFLEGVVGVHVDAEAHAQHLGFPGSEAGEDFAGGFLEALAGRHLDRRLHGGVLDEIAQVRIFVVTDRGFH
GDRLFGDLQYLADLVLRHVHALAKLFRGGLATHFLEHLAGDAVELVDRLDHVHRDADGACLVGDRTGDRLAN
PPGGVGREFVATTVFELVHRLHQADVAFLDQVEELQAAVGVLLGDGNHQAQVGLDHFLLRPASLGFADRHRA
VDFLDLGDGQLDLAFQGRQLLLVAQDVVAQALDGLGVLRLALQDAVDPLLVGLVVREQAQEVGTRHARVTHA
ELHDGAFLGAYAFQGGAHAGDQGVELLGHQLDRHEQLGQAGEFGGGLLAAATVLLQGLLGLVELLGDRGETQ
AGFFRIRTAVAFVVAVAAVVAFFFLVVLLFRVGGIVLQVDRLHLFGGQAAVIGIDIAAEDVGEATAFGDDAI
VVGQDAVHRARELGDGAHHFADAFLDALGDFDLAFAGQQFHGTHFTHVHAHRVGGATDVAFHRGQGRCGFFR
CGFVGIRLGQQQGIRIRGCLEYVDPHVVDHADDVFHLFRIGNILRQVVVDLRVSQVSLLTASGDQLFQTRLL
LRFSGHNTLSTEGLGGQKISRGLYLMPGLRRQFSSGKAMKRQHCSAL*

AnnotationID:7179 GeneID:7179

AnnotatorUID: diggins

Modification Date/Time: 2005-03-29 08:08:29

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:13996

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:31427

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

Homologs By Global Alignment

Gene ID:7179

Identity:

10%

20%

30%

40%

50%

60%

70%

80%

90%

100%

HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score

203143 gb|AAN82265.1|AE016767_25 (AE016767) Hypothetical protein [Escherichia coli CFT073] 734 20.70 27.24 408 655.0

GC ORFID: `50181`	How Found: `Glimmer`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name:	Glimmer Score:
Start: `6448426`	Stop: `6450513`
Length: `2088`
Start Codon: `ATG`	Truncated Start:
Stop Codon: `TGA`	Truncated Stop:
Homolog:	Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGAGGCGGTCTCGCGGTGGACGGGAATATAAGCGGAAGTGTAGACGCCGGGCGGCGGGGCAAGCGGCAAAG AAAAACCCCCGGTTTTTCAGGCCGGGGGTTCGTTCGTCACTCGTCGAGGAAGGAGCGCAGGTGCTCGCTTCG CGACGGATGGCGCAGCTTGCGCAACGCCTTGGCTTCGATCTGGCGGATCCGCTCGCGGGTCACATCGAACTG CTTGCCGACTTCCTCGAGGGTGTGGTCGGTGTTCATGTCGATGCCGAAGCGCATGCGCAGCACCTTGGCTTC CCGGGCAGTGAGGCCGGCGAGGACTTCGCGGGTGGATTCCTTGAGGCTCTCGCTGGTCGCCATCTCGATCGG CGACTGCATGGTGGAGTCCTCGATGAAATCGCCCAGGTGCGAATCTTCGTCGTCACCGATCGGGGTTTCCAT GGAGATCGGCTCTTTGGCGATCTTCAGTACCTTGCGGATCTTGTCCTCAGGCATGTCCATGCGCTCGCCAAG CTCTTCCGGGGTGGGCTCGCGACCCATTTCCTGGAGCATCTGGCGGGAGATGCGGTTGAGCTTGTTGATCGT CTCGATCATGTGCACCGGGATGCGGATGGTGCGTGCCTGGTCGGCGATCGAACGGGTGATCGCCTGGCGAAT CCACCAGGTGGCGTAGGTAGAGAATTTGTAGCCACGACGGTATTCGAACTTGTCCACCGCCTTCATCAGGCC GATGTTGCCTTCCTGGATCAGGTCGAGGAATTGCAGGCCGCGGTTGGTGTACTTCTTGGCGATGGAAATCAC CAGGCGCAGGTTGGCCTCGACCATTTCCTTCTTCGCCCGGCGAGCCTTGGCTTCGCCGATCGACATCGCGCG GTTGATTTCCTTGATCTCGGCGACGGTCAGCTCGACCTCGCTTTCCAGGGCCGCCAGCTTCTGCTGGTTGCG CAGGATGTCGTCGCGCAGGCGCTCGATGGCCTCGGCGTACTTCGGCTTGCTCTTCAGGACGCTGTCGACCCA CTTCTCGTCGGTCTCGTGGTTCGGGAACAGGCGCAGGAAGTCGGCACGCGGCATGCGCGCGTCACGCACGCA GAGTTGCATGATGGCGCGTTCCTGGGCGCGTACGCCTTCCAGGGCGGAGCGCACGCGGGCGACCAGGGCGTC GAACTGCTTGGGCACCAGCTTGATCGGCATGAACAGCTCGGCCAAGCCGGTGAGTTCGGCGGTGGCCTGCTT GCTGCCGCGACCGTGCTTCTTCAGGGCCTTCTTGGCCTTGTCGAGCTGCTCGGAGACCGCGGTGAAACGCAG GCGGGCTTCTTCCGGATCCGGACCGCCGTCGCCTTCGTCGTCGCTGTCGCTGCTGTCGTCGCTTTCTTCTTC CTCGTCGTCCTTCTCTTTCGAGTCGGCGGAATCGTCCTTCAGGTTGACCGGCTCCACCTCTTCGGCGGGCAG GCTGCCGTCATCGGGATCGATATAGCCGCTGAGGACGTCGGAGAGGCGACCGCCTTCGGCGACGATGCGATT GTAGTCGGCCAGGATGCTGTCCACCGTGCCCGGGAACTGGGCGATGGCGCTCATCACTTCGCGGATGCCTTC CTCGATGCGCTTGGCGATTTCGATCTCGCCTTCGCGGGTCAGCAGTTCCACGGTACCCATTTCACGCATGTA CATGCGCACCGGGTCGGTGGTGCGACCGATGTCGCTTTCCACCGCGGCCAGGGCCGCTGCGGCTTCTTCCGC TGCGGCTTCGTCGGTATCCGCCTCGGCCAGCAACAGGGCATCCGCATCCGGGGCTGTCTCGAATACGTTGAT CCCCATGTCGTTGATCATGCGGATGATGTCTTCCACCTGTTCCGGATCGGAAATATCCTCCGGCAGGTGGTC GTTGACCTCCGCGTAAGTCAGGTATCCCTGCTCACGGCCTCGGGCGATCAACTCTTTCAGACGAGATTGCTG TTGCGCTTTTCCGGACATAACACCCTATCCACTGAAGGTCTTGGCGGGCAAAAAATAAGCAGAGGATTATAC CTGATGCCTGGGCTGAGGCGCCAGTTCAGCTCTGGGAAGGCGATGAAGCGGCAACACTGTAGTGCTCTCTGA