ViewGene

Locus Name:
GeneID:
Location:

GeneID:7164
TrivialName: PA14_06850
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_06850
PAO1 Ortholog Locus:
Sequence Length:1959
Protein Length:652
Start: 594811
Stop: 596769
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: emb|CAD55355.1| (AL939123) hypothetical protein [Streptomyces coelicolor A3(2)]
Identities = 69/181 (38%), Positives = 74/181 (40%), Gaps = 37/181 (20%)
Sequence:
GTGGGACTATCGGCAGCAGCGCCTGCTGAGCGACCACGTGCTGCTGCAACCGATGCGGCCGCGCGGCGCGAC
CAGCGCCAGCCTGCCGGCGCACCTGGAGAAGACCGCGCTGCATCTGCGCCGCCAGTTCGCCTGCCTGCGCGA
CGGTCGCCAACGCCTGCGCCAGCAGCCGCAAGGCGACGAGATCGACCTCGATGCCTGGCTCGACTTCCAGGT
CGAGCGGCGGCGCGGCGGTTCCACCCAGCCAGGCCTGTTCCTCGAACAGCGGCCGCGCCGGCGCGACCTCGC
CTGCCTGTTGCTGGCGGACCTGTCGATGTCCACCGAAGCCTACCTCGACGACCAGCGGCGAGTGATCGACAG
CATCGTCGACAGCCTGCTGCTGTTCGGCGAGGCATTGCAGGCACTGGGCGACCCCTTCGCGCTGTACGGGTT
TTCCTCGGTGCGCCGGCAGCAGGTGCGCTGGCAGGTGCTGAAGGACTTCGACGAAGGCTACGGCGGCGAGGT
CCGCGGTCGCGTGCTGGCGCTCTCGCCGGGCTACTACACGCGGATGGGCGCGGCGATCCGCCGGGCCAGCCA
GGAGCTCGGCGGGCAGCCGCAGAAGCGTCGCCTGCTGTTGCTGTTGAGCGACGGCAAGCCCAACGACCTGGA
CCGCTACGAGGGCCGCTACGGCATCGAGGACACCCGCCAGGCGGTGATCGAGGCGCGCAGCCAGGGACTGGT
GCCGTTCTGCATCACCATCGACAAGGAGGCGGCGGACTACCTGCCCTACCTGTTCGGCGCCGACGGCTTCGC
GCTGGTCGAGCGCGCCGGGCAGTTGCCCGAGCGCCTGCTCCAGCTCTATCGGCGCCTGCGCCGCTGAGAGGC
CTCAGGGAACATCGCGCGGCAGCCAGAGCATCATGCCCAGGCAGAACAGCGCCAGCCCGACGCAGAACCAGG
CGAAGCGCCGCTGCCGGCGACCCTGGAGCTGGCGCTGGGAAGCGCTGGGCAGTGGCATGCCGCACTGTTCGC
AGGCGCTTTCCGCGCCTTCGGTTTCATGGAGGCAATACAGGCATTGGCGCATGGGCGTTCTCGCGGGCTCGA
CCCCGCCAGCTTGCCGGTGGACGGGCCGTGGCGCGCTTGACCGCGATCAAGCGGCGGGGCTGTTCACTCGAA
GCACTCCAGGCGTTCGCGGTCGAGGATGCTGATTTCGCGGCCGTCGAGGCGGATGATGCCCTCGTCGCCGAG
GCGGTGCATGATCCGCGAGAAGGTTTCCGGCTGGATCGACAGGTGACCGGCCACCAGTTGCTTGGCCACCGG
GATTTCCACCCGGCAGTTCTCCCCCGGCGCGTGGGCGGCGAGGGTCAGCAGGTAGCGCACCACGCGGTGGGT
GGCGTTCTTCAGGGAAAGCGTCTCGATCTCGTCGATGCGCTGGTGCAGGCGGGTGCTGAGCTTGGCCAGCAG
GGCCAGGGCCAACGGGGTGTTGTCCTGCAACTGGCGCAGGTAGGCCTTGTTGGAGAAACGGAACAGCTGGCT
GGGCACCACGGCCTGGGCGGTGGCCACGTAGTTCGGGGTGTCCATGAACATCATCGCCTCGGCGAAGGTGTT
GCGTTCGTTGGTCACTTCGAGAATCTTCTCCTGGCCTTCCGGGGTCAGCCGGTAGATCTTCACGCAGCCGGA
AATCAGGTAGTAGAAGGCGTGCGCCGGCTCGCCCTGGCGGAACACGTAGGCGCCCTTGTCGAGGTTGACCAG
GTCGCTGCTGGCGAGCAGTTCCTGGAGCTGGACGGGAGAAAGCGGTTCGAACAGGTGGTGGCTTTGCAGCAA
CTGCTGGTGGACGCGCTGGAATTCCATGCTGGGAAGGCTCGCGATGATGAGGGGACTGGCCACTGTAGCGGG
CCCGGCGCAGATCATCTTGACGCACGGCAAGCTCCCGGCGGCTGGGTGTTGCCGTCGTCCGGCGAGCGGAAC
TATTACAGCGTGTAA
Translation:
MGLSAAAPAERPRAAATDAAARRDQRQPAGAPGEDRAASAPPVRLPARRSPTPAPAAARRRDRPRCLARLPG
RAAARRFHPARPVPRTAAAPARPRLPVAGGPVDVHRSLPRRPAASDRQHRRQPAAVRRGIAGTGRPLRAVRV
FLGAPAAGALAGAEGLRRRLRRRGPRSRAGALAGLLHADGRGDPPGQPGARRAAAEASPAVAVERRQAQRPG
PLRGPLRHRGHPPGGDRGAQPGTGAVLHHHRQGGGGLPALPVRRRRLRAGRARRAVARAPAPALSAPAPLRG
LREHRAAARASCPGRTAPARRRTRRSAAAGDPGAGAGKRWAVACRTVRRRFPRLRFHGGNTGIGAWAFSRAR
PRQLAGGRAVARLTAIKRRGCSLEALQAFAVEDADFAAVEADDALVAEAVHDPREGFRLDRQVTGHQLLGHR
DFHPAVLPRRVGGEGQQVAHHAVGGVLQGKRLDLVDALVQAGAELGQQGQGQRGVVLQLAQVGLVGETEQLA
GHHGLGGGHVVRGVHEHHRLGEGVAFVGHFENLLLAFRGQPVDLHAAGNQVVEGVRRLALAEHVGALVEVDQ
VAAGEQFLELDGRKRFEQVVALQQLLVDALEFHAGKARDDEGTGHCSGPGADHLDARQAPGGWVLPSSGERN
YYSV*
AnnotationID:7164GeneID:7164
AnnotatorUID: diggins
Modification Date/Time: 2005-03-28 12:12:45
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:16889
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31397
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50166How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6396153Stop: 6398111
Length: 1959
Start Codon: GTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGGACTATCGGCAGCAGCGCCTGCTGAGCGACCACGTGCTGCTGCAACCGATGCGGCCGCGCGGCGCGAC
CAGCGCCAGCCTGCCGGCGCACCTGGAGAAGACCGCGCTGCATCTGCGCCGCCAGTTCGCCTGCCTGCGCGA
CGGTCGCCAACGCCTGCGCCAGCAGCCGCAAGGCGACGAGATCGACCTCGATGCCTGGCTCGACTTCCAGGT
CGAGCGGCGGCGCGGCGGTTCCACCCAGCCAGGCCTGTTCCTCGAACAGCGGCCGCGCCGGCGCGACCTCGC
CTGCCTGTTGCTGGCGGACCTGTCGATGTCCACCGAAGCCTACCTCGACGACCAGCGGCGAGTGATCGACAG
CATCGTCGACAGCCTGCTGCTGTTCGGCGAGGCATTGCAGGCACTGGGCGACCCCTTCGCGCTGTACGGGTT
TTCCTCGGTGCGCCGGCAGCAGGTGCGCTGGCAGGTGCTGAAGGACTTCGACGAAGGCTACGGCGGCGAGGT
CCGCGGTCGCGTGCTGGCGCTCTCGCCGGGCTACTACACGCGGATGGGCGCGGCGATCCGCCGGGCCAGCCA
GGAGCTCGGCGGGCAGCCGCAGAAGCGTCGCCTGCTGTTGCTGTTGAGCGACGGCAAGCCCAACGACCTGGA
CCGCTACGAGGGCCGCTACGGCATCGAGGACACCCGCCAGGCGGTGATCGAGGCGCGCAGCCAGGGACTGGT
GCCGTTCTGCATCACCATCGACAAGGAGGCGGCGGACTACCTGCCCTACCTGTTCGGCGCCGACGGCTTCGC
GCTGGTCGAGCGCGCCGGGCAGTTGCCCGAGCGCCTGCTCCAGCTCTATCGGCGCCTGCGCCGCTGAGAGGC
CTCAGGGAACATCGCGCGGCAGCCAGAGCATCATGCCCAGGCAGAACAGCGCCAGCCCGACGCAGAACCAGG
CGAAGCGCCGCTGCCGGCGACCCTGGAGCTGGCGCTGGGAAGCGCTGGGCAGTGGCATGCCGCACTGTTCGC
AGGCGCTTTCCGCGCCTTCGGTTTCATGGAGGCAATACAGGCATTGGCGCATGGGCGTTCTCGCGGGCTCGA
CCCCGCCAGCTTGCCGGTGGACGGGCCGTGGCGCGCTTGACCGCGATCAAGCGGCGGGGCTGTTCACTCGAA
GCACTCCAGGCGTTCGCGGTCGAGGATGCTGATTTCGCGGCCGTCGAGGCGGATGATGCCCTCGTCGCCGAG
GCGGTGCATGATCCGCGAGAAGGTTTCCGGCTGGATCGACAGGTGACCGGCCACCAGTTGCTTGGCCACCGG
GATTTCCACCCGGCAGTTCTCCCCCGGCGCGTGGGCGGCGAGGGTCAGCAGGTAGCGCACCACGCGGTGGGT
GGCGTTCTTCAGGGAAAGCGTCTCGATCTCGTCGATGCGCTGGTGCAGGCGGGTGCTGAGCTTGGCCAGCAG
GGCCAGGGCCAACGGGGTGTTGTCCTGCAACTGGCGCAGGTAGGCCTTGTTGGAGAAACGGAACAGCTGGCT
GGGCACCACGGCCTGGGCGGTGGCCACGTAGTTCGGGGTGTCCATGAACATCATCGCCTCGGCGAAGGTGTT
GCGTTCGTTGGTCACTTCGAGAATCTTCTCCTGGCCTTCCGGGGTCAGCCGGTAGATCTTCACGCAGCCGGA
AATCAGGTAGTAGAAGGCGTGCGCCGGCTCGCCCTGGCGGAACACGTAGGCGCCCTTGTCGAGGTTGACCAG
GTCGCTGCTGGCGAGCAGTTCCTGGAGCTGGACGGGAGAAAGCGGTTCGAACAGGTGGTGGCTTTGCAGCAA
CTGCTGGTGGACGCGCTGGAATTCCATGCTGGGAAGGCTCGCGATGATGAGGGGACTGGCCACTGTAGCGGG
CCCGGCGCAGATCATCTTGACGCACGGCAAGCTCCCGGCGGCTGGGTGTTGCCGTCGTCCGGCGAGCGGAAC
TATTACAGCGTGTAA