ViewGene
Locus Name:
GeneID:
Location:

GeneID:7161
TrivialName: PA14_06760
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_06760
PAO1 Ortholog Locus:
Sequence Length:792
Protein Length:263
Start: 591066
Stop: 590275
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGAGATCGACGATGTCCATCAGCGCCGCCACCGTCGCCGGGTCGTCCGAGAGCGGTTCGGCCAGCGCCAC
CCGGCACGCCTCGCGCGGGTCCATGCCGTCGCCGATGAGGCGCGCGGCGAAGATCAGCAGGCGGGTCGAGGC
GACTTCCTCCAGGTCGTGCTGCTCCAGCCGCCGCAGCGCCTGGCCCAACTGCACCAGGCGCTGCGCCAGGGC
CTCGGCACAACCGCTCTCGCCGACCAGGATGCGTGCCTCGTGCTGCGCCGCCGGGTAGTCGAAGCGCAACGC
GACGAAACGCTGCCGGGTGCTGGGCTTCAGGCCCTTGAGCAGGTTCTGGTAGCCGGGGTTGTAGGACACCAC
CAGCATGAACGAAGGCGGCGCCTGCAACGTCTCGCCGGTGCGCTCCAGGTACAGCTCGCGGCGGTCGTCGGC
CAGCGGGTGGATGGCGACCGTGGTGTCCTGGCGCGCCTCCACCACTTCGTCCAGGTAGCAGATACCGCCTTC
GCGCACCGCGCGGGTCAGCGGGCCGTCCTGCCACCAGGTGCCGTCGGCGCCGATCAGATGGCGGCCGAGCAG
GTCGGCGGCGCCCAGGTCGTCGTGGCAGGCGACGCTGTACAGCGGCAGTTCCAGGCGCCGCGCCATGTACTG
GACGAAGCGGGTCTTGCCGCAACCGGTGGGGCCCTTGAGCAATACCGGCAGGCCGTGCCGCCAGGCGCGCTC
GAAGACTTCGATCTCATGGCCGGTGGCCTCGTAGAAGGGTGTCGCGTCCCGCATGTCCTACTCCTGCGCTAG
Translation:
MEIDDVHQRRHRRRVVRERFGQRHPARLARVHAVADEARGEDQQAGRGDFLQVVLLQPPQRLAQLHQALRQG
LGTTALADQDACLVLRRRVVEAQRDETLPGAGLQALEQVLVAGVVGHHQHERRRRLQRLAGALQVQLAAVVG
QRVDGDRGVLARLHHFVQVADTAFAHRAGQRAVLPPGAVGADQMAAEQVGGAQVVVAGDAVQRQFQAPRHVL
DEAGLAATGGALEQYRQAVPPGALEDFDLMAGGLVEGCRVPHVLLLR*
AnnotationID:7161GeneID:7161
AnnotatorUID: diggins
Modification Date/Time: 2005-03-28 12:12:02
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:13961




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:31391




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 50163How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 6392408Stop: 6391617

          
Length: 792


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGGAGATCGACGATGTCCATCAGCGCCGCCACCGTCGCCGGGTCGTCCGAGAGCGGTTCGGCCAGCGCCAC 
CCGGCACGCCTCGCGCGGGTCCATGCCGTCGCCGATGAGGCGCGCGGCGAAGATCAGCAGGCGGGTCGAGGC 
GACTTCCTCCAGGTCGTGCTGCTCCAGCCGCCGCAGCGCCTGGCCCAACTGCACCAGGCGCTGCGCCAGGGC 
CTCGGCACAACCGCTCTCGCCGACCAGGATGCGTGCCTCGTGCTGCGCCGCCGGGTAGTCGAAGCGCAACGC 
GACGAAACGCTGCCGGGTGCTGGGCTTCAGGCCCTTGAGCAGGTTCTGGTAGCCGGGGTTGTAGGACACCAC 
CAGCATGAACGAAGGCGGCGCCTGCAACGTCTCGCCGGTGCGCTCCAGGTACAGCTCGCGGCGGTCGTCGGC 
CAGCGGGTGGATGGCGACCGTGGTGTCCTGGCGCGCCTCCACCACTTCGTCCAGGTAGCAGATACCGCCTTC 
GCGCACCGCGCGGGTCAGCGGGCCGTCCTGCCACCAGGTGCCGTCGGCGCCGATCAGATGGCGGCCGAGCAG 
GTCGGCGGCGCCCAGGTCGTCGTGGCAGGCGACGCTGTACAGCGGCAGTTCCAGGCGCCGCGCCATGTACTG 
GACGAAGCGGGTCTTGCCGCAACCGGTGGGGCCCTTGAGCAATACCGGCAGGCCGTGCCGCCAGGCGCGCTC 
GAAGACTTCGATCTCATGGCCGGTGGCCTCGTAGAAGGGTGTCGCGTCCCGCATGTCCTACTCCTGCGCTAG