ViewGene

Locus Name:
GeneID:
Location:

GeneID:7160
TrivialName: PA14_06630
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_06630
PAO1 Ortholog Locus:
Sequence Length:1839
Protein Length:612
Start: 580689
Stop: 578851
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGATGCGCGGCAGCAGGCGGGCGAAGTAGAAGCGCGCGGTACCCAGCTTGCTGGCGTAGAAGTCGTCCTC
GCCCTGCTTGGCCAGCGCGGTGCGCGCCATCAATGCCCACATGTAGGCATAGGCGGTGTAGCCGAACACATG
CAGGTATTCGACCGACGCCGCGCCGATCTCGTTGGGGTTGCCCTTGGCGCGGTCGAGCAGCCAGGCGGTCAG
CTCTTCCAGGTTCTCCACGGCGGCCGCCAGCGGCTTGCTGAACTCGCCCAGGGCCTCGTCGGCGGAAGCGAC
GAAGGCCTTGATCTCGTCGGTGAAGTGACGGGAGAAGGCGCCGCCGCTGCCGATCACCTTACGTCCCACCAA
GTCGAGCGCCTGAATGCCGTTGGTGCCTTCGTAGATCTGCGTGATGCGACAGTCGCGCACCAGTTGCTCCTG
GCCCCATTCGCGGATGAAGCCGTGGCCGCCGAAGATCTGCTGGCCATGGATAGTGGTTTCCAGTCCCATGTC
GGTGAGGAATGCCTTGGCCACCGGGGTCAGCAGCGCCACCAGCTCTTCCGCACGCTTGCGGGTGACCGCGTC
TTCGCTGTACTTGGCGGTGTCCAGCTGCATCGCGACGTAGCTGGAGAAGGCGCGGCCGCCTTCGTTCAGCGC
CTTCATGGTGAGCAGCATGCGGCGCACGTCGGGGTGCACGATGATCGGGTCGGCGGCCTTGTCCTTGGCTAC
CGGGCCGGTCGGCGCGCGGCTCTGGATACGCTCGCGGGCATACTCGATGGCGCTCTGGTAGGAGCGCTCGCC
GGTGGCCAGGCCCTGGATGCCGACGCCAAGGCGCTCGTAGTTCATCATGGTGAACATCGCCGCCAGGCCCTT
GTTGACCTCGCCCACCAGCCAACCGGTGGCGCCGTCGAAGTTCATCACGCAGGTGGCCGAGGCCTTGATCCC
CATCTTGTGCTCGATGGAGCCGCAACCCAGGCTGTTCTTCTCGCCCAGCGAGCCGTCGGCGTTGACCAGCAC
CTTCGGCACCAGGAACAGCGAGATGCCCTTCGGCCCGGCCGGGGCGTCGGGCAGCTTGGCCAGCACCAGGTG
GATGATGTTCTCGGTCAGGTCATGCTCGCCGCCGGTGATGAAGATCTTGGTCCCGCTGATCTTGTAGGAGCC
GTCGGCCTGCGGCTCAGCCTTGGTGCGGATGATACCCAGGTCGGTGCCGGCATGCGGCTCGGTCAGGCACAT
GGAACCGGCCCAGATACCGGCGTACATGTTCGGCAGGTACTTGTCCTTCAGTTCGTCGCTGGCATGGGCATT
GAGCGCCAGGCAGGCGCCGGCGGTCAGCATCGGATACAGGCCGAACGACAGGTTGGCCGAGTTGACCAGTTC
CTCGACCTGCGCCGAGATCACCTTGGGCATACCCATGCCGCCGTAGGCCGGATCACCGCCGACGCCGACCCA
GCCGCCTTCGGCGTAGGTCCGGTAGGCCTCGGGGAAGCCGGCCGGGGTGCTCACCGCGCCAGCGTTCCACTG
GCAGCCTTCCTCGTCGCCCGGACGGTTCAGCGGGGCGATGGTACCGGCGGTGACCTTGCCGGCCTCTTCGAG
GATCGCCGCGGCGGTCTCGGCGTCGACCACTTCGGCCAGCGCCGGCAGTTGCGCCCAGAGCCGGGAGACCTC
GAACACCTCATTGAGGACGAAGCGCATGTCGCGCAGCGGAGCTTTGTAATCAGCCATGTGGGGGAATCCTCG
ATCGTACCGATCGCCGGCCGGGGGCCAGCGGCAACAAAATGGAGGCACGAAAGGTGTGCCGCGGCCGAGTCT
ACACCACCAACATTTCGGACTTGTAGCGTCACGTCGTGA
Translation:
MDARQQAGEVEARGTQLAGVEVVLALLGQRGARHQCPHVGIGGVAEHMQVFDRRRADLVGVALGAVEQPGGQ
LFQVLHGGRQRLAELAQGLVGGSDEGLDLVGEVTGEGAAAADHLTSHQVERLNAVGAFVDLRDATVAHQLLL
APFADEAVAAEDLLAMDSGFQSHVGEECLGHRGQQRHQLFRTLAGDRVFAVLGGVQLHRDVAGEGAAAFVQR
LHGEQHAAHVGVHDDRVGGLVLGYRAGRRAALDTLAGILDGALVGALAGGQALDADAKALVVHHGEHRRQAL
VDLAHQPTGGAVEVHHAGGRGLDPHLVLDGAATQAVLLAQRAVGVDQHLRHQEQRDALRPGRGVGQLGQHQV
DDVLGQVMLAAGDEDLGPADLVGAVGLRLSLGADDTQVGAGMRLGQAHGTGPDTGVHVRQVLVLQFVAGMGI
ERQAGAGGQHRIQAERQVGRVDQFLDLRRDHLGHTHAAVGRITADADPAAFGVGPVGLGEAGRGAHRASVPL
AAFLVARTVQRGDGTGGDLAGLFEDRRGGLGVDHFGQRRQLRPEPGDLEHLIEDEAHVAQRSFVISHVGESS
IVPIAGRGPAATKWRHERCAAAESTPPTFRTCSVTS*
AnnotationID:7160GeneID:7160
AnnotatorUID: diggins
Modification Date/Time: 2005-03-28 05:05:10
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13960
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31389
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50162How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6382031Stop: 6380193
Length: 1839
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGATGCGCGGCAGCAGGCGGGCGAAGTAGAAGCGCGCGGTACCCAGCTTGCTGGCGTAGAAGTCGTCCTC
GCCCTGCTTGGCCAGCGCGGTGCGCGCCATCAATGCCCACATGTAGGCATAGGCGGTGTAGCCGAACACATG
CAGGTATTCGACCGACGCCGCGCCGATCTCGTTGGGGTTGCCCTTGGCGCGGTCGAGCAGCCAGGCGGTCAG
CTCTTCCAGGTTCTCCACGGCGGCCGCCAGCGGCTTGCTGAACTCGCCCAGGGCCTCGTCGGCGGAAGCGAC
GAAGGCCTTGATCTCGTCGGTGAAGTGACGGGAGAAGGCGCCGCCGCTGCCGATCACCTTACGTCCCACCAA
GTCGAGCGCCTGAATGCCGTTGGTGCCTTCGTAGATCTGCGTGATGCGACAGTCGCGCACCAGTTGCTCCTG
GCCCCATTCGCGGATGAAGCCGTGGCCGCCGAAGATCTGCTGGCCATGGATAGTGGTTTCCAGTCCCATGTC
GGTGAGGAATGCCTTGGCCACCGGGGTCAGCAGCGCCACCAGCTCTTCCGCACGCTTGCGGGTGACCGCGTC
TTCGCTGTACTTGGCGGTGTCCAGCTGCATCGCGACGTAGCTGGAGAAGGCGCGGCCGCCTTCGTTCAGCGC
CTTCATGGTGAGCAGCATGCGGCGCACGTCGGGGTGCACGATGATCGGGTCGGCGGCCTTGTCCTTGGCTAC
CGGGCCGGTCGGCGCGCGGCTCTGGATACGCTCGCGGGCATACTCGATGGCGCTCTGGTAGGAGCGCTCGCC
GGTGGCCAGGCCCTGGATGCCGACGCCAAGGCGCTCGTAGTTCATCATGGTGAACATCGCCGCCAGGCCCTT
GTTGACCTCGCCCACCAGCCAACCGGTGGCGCCGTCGAAGTTCATCACGCAGGTGGCCGAGGCCTTGATCCC
CATCTTGTGCTCGATGGAGCCGCAACCCAGGCTGTTCTTCTCGCCCAGCGAGCCGTCGGCGTTGACCAGCAC
CTTCGGCACCAGGAACAGCGAGATGCCCTTCGGCCCGGCCGGGGCGTCGGGCAGCTTGGCCAGCACCAGGTG
GATGATGTTCTCGGTCAGGTCATGCTCGCCGCCGGTGATGAAGATCTTGGTCCCGCTGATCTTGTAGGAGCC
GTCGGCCTGCGGCTCAGCCTTGGTGCGGATGATACCCAGGTCGGTGCCGGCATGCGGCTCGGTCAGGCACAT
GGAACCGGCCCAGATACCGGCGTACATGTTCGGCAGGTACTTGTCCTTCAGTTCGTCGCTGGCATGGGCATT
GAGCGCCAGGCAGGCGCCGGCGGTCAGCATCGGATACAGGCCGAACGACAGGTTGGCCGAGTTGACCAGTTC
CTCGACCTGCGCCGAGATCACCTTGGGCATACCCATGCCGCCGTAGGCCGGATCACCGCCGACGCCGACCCA
GCCGCCTTCGGCGTAGGTCCGGTAGGCCTCGGGGAAGCCGGCCGGGGTGCTCACCGCGCCAGCGTTCCACTG
GCAGCCTTCCTCGTCGCCCGGACGGTTCAGCGGGGCGATGGTACCGGCGGTGACCTTGCCGGCCTCTTCGAG
GATCGCCGCGGCGGTCTCGGCGTCGACCACTTCGGCCAGCGCCGGCAGTTGCGCCCAGAGCCGGGAGACCTC
GAACACCTCATTGAGGACGAAGCGCATGTCGCGCAGCGGAGCTTTGTAATCAGCCATGTGGGGGAATCCTCG
ATCGTACCGATCGCCGGCCGGGGGCCAGCGGCAACAAAATGGAGGCACGAAAGGTGTGCCGCGGCCGAGTCT
ACACCACCAACATTTCGGACTTGTAGCGTCACGTCGTGA