ViewGene

Locus Name:
GeneID:
Location:

GeneID:7157
TrivialName: PA14_06550
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_06550
PAO1 Ortholog Locus:
Sequence Length:1098
Protein Length:365
Start: 573167
Stop: 574264
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: dbj|BAC70262.1| (AP005031) putative translation initiation factor IF-2 [Streptomyces avermitilis MA-4680]
Identities = 130/389 (33%), Positives = 140/389 (35%), Gaps = 73/389 (18%)
Sequence:
GTGCGTCGGTACCCTGGGCGAGTTGCGCGACAGTTGGCGGGTGGTGGACGGCTTCGTCCACGTCAATCGCTT
CCGCGCCTTCGCCGACTACCTGCAACACGCGGCCGGCAGCGGTCTGCTGCCGCTGACCCTGCGCCACGAGGA
CCGGGTCCTGCATTTCCCCGACCTGCGCAGCCTGACCCACGAACTCAAGGCGCTGGGCGCGCACAACCTCAA
CCCCGGGCGGCCCGACGGCCTGACCGGGCGCCAGCGCATCCGCGCGCTGGTCGCCGCCTACGAGCGTTTCCG
CCAGCCCGAGGGGCTGCCCGCTACCTACCGCGTCGTCTTCGGCGTGCTGCGCAAGGATTCCTGAACCATGCC
GGCGTTCTTCGTCACCGGTACCGACACCGAGATCGGCAAGACCACCATCGCCGCCGGCCTGCTCCACGCGGC
CCGGCGTGCCGGCCTGAGCACCGCCGCGGCGAAGCCGGTGGCCTCCGGCTGCGAGCCCACGGCGCAAGGCCT
GCGCAATGGCGACGCGCTGGCGTTGCTCGGCCAGTGTTCGCTGGCGCTGGCCTACGAGCAGGTCAACCCGCT
GGCCTTCGCGCCGGCCATCGCCCCGCACCTGGCGGCGCGCGAGGCCGGCGTCGAACTGAGCGCCGCACGCTT
GCACGAGGCGGTGCGCGAGGTGCTGGCGCTACAGGCCGATCTCACCCTGGTGGAGGGCGCCGGCGGTTGGCG
CGTGCCGTTGCAGGGTCGCGAGAACCTCTCCGACCTGGCGCGCCTGCTGGCGCTGCCGGTGGTGCTGGTGGT
CGGCGTGCGCCTGGGCTGTATCAACCATGCGCTGCTCAGCGCCGAGGCGATCCTAGGCGACGGCCTGGCGCT
GGCCGGCTGGGTGGCCAACGTGGTCGACCCGGCTACCTCGCGCCTGGAGGAGAACCTGGCGACCCTCGCCGA
GCGCCTGCCGGCGCCCTGCCTGGGCCGGGTACCGCGCCTGGAGGAAGCCACTCCCGCGGCCGTGGCCGCGCA
CCTCGACCTGCGGCCCCTGGGCATCGGGCTATAAACAGCGGGCCGTCCATAACCAACGGGCGGTACCCAGCG
CCGGCCAAGTCTGCTTGA
Translation:
MRRYPGRVARQLAGGGRLRPRQSLPRLRRLPATRGRQRSAAADPAPRGPGPAFPRPAQPDPRTQGAGRAQPQ
PRAARRPDRAPAHPRAGRRLRAFPPARGAARYLPRRLRRAAQGFLNHAGVLRHRYRHRDRQDHHRRRPAPRG
PACRPEHRRGEAGGLRLRAHGARPAQWRRAGVARPVFAGAGLRAGQPAGLRAGHRPAPGGARGRRRTERRTL
ARGGARGAGATGRSHPGGGRRRLARAVAGSREPLRPGAPAGAAGGAGGRRAPGLYQPCAAQRRGDPRRRPGA
GRLGGQRGRPGYLAPGGEPGDPRRAPAGALPGPGTAPGGSHSRGRGRAPRPAAPGHRAINSGPSITNGRYPA
PAKSA*
AnnotationID:7157GeneID:7157
AnnotatorUID: diggins
Modification Date/Time: 2005-03-28 04:04:07
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:16881
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31383
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50159How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6374509Stop: 6375606
Length: 1098
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCGTCGGTACCCTGGGCGAGTTGCGCGACAGTTGGCGGGTGGTGGACGGCTTCGTCCACGTCAATCGCTT
CCGCGCCTTCGCCGACTACCTGCAACACGCGGCCGGCAGCGGTCTGCTGCCGCTGACCCTGCGCCACGAGGA
CCGGGTCCTGCATTTCCCCGACCTGCGCAGCCTGACCCACGAACTCAAGGCGCTGGGCGCGCACAACCTCAA
CCCCGGGCGGCCCGACGGCCTGACCGGGCGCCAGCGCATCCGCGCGCTGGTCGCCGCCTACGAGCGTTTCCG
CCAGCCCGAGGGGCTGCCCGCTACCTACCGCGTCGTCTTCGGCGTGCTGCGCAAGGATTCCTGAACCATGCC
GGCGTTCTTCGTCACCGGTACCGACACCGAGATCGGCAAGACCACCATCGCCGCCGGCCTGCTCCACGCGGC
CCGGCGTGCCGGCCTGAGCACCGCCGCGGCGAAGCCGGTGGCCTCCGGCTGCGAGCCCACGGCGCAAGGCCT
GCGCAATGGCGACGCGCTGGCGTTGCTCGGCCAGTGTTCGCTGGCGCTGGCCTACGAGCAGGTCAACCCGCT
GGCCTTCGCGCCGGCCATCGCCCCGCACCTGGCGGCGCGCGAGGCCGGCGTCGAACTGAGCGCCGCACGCTT
GCACGAGGCGGTGCGCGAGGTGCTGGCGCTACAGGCCGATCTCACCCTGGTGGAGGGCGCCGGCGGTTGGCG
CGTGCCGTTGCAGGGTCGCGAGAACCTCTCCGACCTGGCGCGCCTGCTGGCGCTGCCGGTGGTGCTGGTGGT
CGGCGTGCGCCTGGGCTGTATCAACCATGCGCTGCTCAGCGCCGAGGCGATCCTAGGCGACGGCCTGGCGCT
GGCCGGCTGGGTGGCCAACGTGGTCGACCCGGCTACCTCGCGCCTGGAGGAGAACCTGGCGACCCTCGCCGA
GCGCCTGCCGGCGCCCTGCCTGGGCCGGGTACCGCGCCTGGAGGAAGCCACTCCCGCGGCCGTGGCCGCGCA
CCTCGACCTGCGGCCCCTGGGCATCGGGCTATAAACAGCGGGCCGTCCATAACCAACGGGCGGTACCCAGCG
CCGGCCAAGTCTGCTTGA