ViewGene

Locus Name:
GeneID:
Location:

GeneID:7154
TrivialName: PA14_06490
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_06490
PAO1 Ortholog Locus:
Sequence Length:1416
Protein Length:471
Start: 570939
Stop: 569524
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGATTGGCCAGGCCGAGGTAGTCGTTGGAACAGAAGGCCAGCAGCGGCTGGCCGTCGACCACGACGTCCGG
GCCCTGGGCCGACTCCAGCAGCGGCCGCTGGCGGTAGAGGTCTTCCGCGCGCCGGCTGGCGAGGCGGGAAGC
GAGATCGAAGGACATGGCAGGTCGCTCGTGTTGCTGGACGGACGCAGGCGCACCCGTCCACGCAGGGCCGAC
ATCAGCGGCTGCAACGAAGGGACGGCGGCGCCCTCCCTTCCAGTATGGTCAGGCGGAAGCGGCGTTATAGAA
CAGCTTCGATTCGCGTTGTTCCACCAACGCCTGCTCGATGGCGGCCTGGTGCACTTCGTCGGCGTGCTCTTC
GCGCTCTTCCGGCTTGATGCCGAGACGGGCGAACAACTGCATGTCCTTTTCGGCCTGCGGGTTCTTCGTGGT
CAGCAGCTTTTCGCCGTAAAAGATCGAGTTGGCCCCGGCCATGAAGGCCAGCGCCTGCATCTGCTCGTTCAT
CTGCTCGCGGCCGGCGGACAGGCGCACGTGGGACTTCGGCATCATGATCCGGGCCACCGCCAGGGTGCGGAT
GAAGTCGAAGGGATCGACGTCCTTCTCTTCCGCCAGGGGCGTGCCCTTGACCTTCACCAGCATGTTGATCGG
CACCGACTCCGGGTGCTCCGGCAGGTTCGCCAACTGGATCAGCAGGCCGGCGCGGTCGTCCACCGACTCGCC
CATGCCGAGGATGCCGCCGGAGCAGATCTTCATCCCCGCCTCGCGCACGTAGGCCAGGGTCTGCAGGCGCTC
GCTGTAGGTGCGGGTGGTGATGATGTTGCCGTAGAACTCCGGCGAGGTATCCAGGTTGTGGTTGTAGTAGTC
GAGGCCGGCGTCCGCCAGCGCCTGGGTCTGTTCCTGGGTCAGGCGGCCGAGGGTCATGCAGGTCTCCAGGCC
GAGCTTCTTCACGCCCTTGACCATCTCCAGGACGTAGGGCATGTCCTTGGCCGACGGGTGCTTCCAGGCAGC
GCCCATGCAGAAGCGGGTCGAACCGATGGCCTTGGCCTCGGCCGCCGCCTCGAGGACCTTCTGCACCTCCAT
CAGCTTCTCCTTGTCCAGGCCGGTGTTGTAGTGGCCGGACTGCGGGCAGTACTTGCAGTCCTCGGGACAGGC
GCCGGTCTTGATCGACAGCAGCGTCGAGACCTGTACGCGGTTCGGGTCGAAGTACGCGCGATGCACCGTCTG
CGCCTGGAACAGCAGGTCGTTGAACGGCTGCTCGAACAGGGCACGGACTTCGGCGAGGGACCAGTCGTGACG
GGTGGCGACGGAAGCGGTTGCACTCATGGGGAAGATTCCTTCGACGCTTGCATGGCGCCTTTTGTCGGGGAG
CCCCGGCACGCCGGGGTCAGGCTTAAGGGGCATCATAAGTGGCTCTAG
Translation:
MIGQAEVVVGTEGQQRLAVDHDVRALGRLQQRPLAVEVFRAPAGEAGSEIEGHGRSLVLLDGRRRTRPRRAD
ISGCNEGTAAPSLPVWSGGSGVIEQLRFALFHQRLLDGGLVHFVGVLFALFRLDAETGEQLHVLFGLRVLRG
QQLFAVKDRVGPGHEGQRLHLLVHLLAAGGQAHVGLRHHDPGHRQGADEVEGIDVLLFRQGRALDLHQHVDR
HRLRVLRQVRQLDQQAGAVVHRLAHAEDAAGADLHPRLAHVGQGLQALAVGAGGDDVAVELRRGIQVVVVVV
EAGVRQRLGLFLGQAAEGHAGLQAELLHALDHLQDVGHVLGRRVLPGSAHAEAGRTDGLGLGRRLEDLLHLH
QLLLVQAGVVVAGLRAVLAVLGTGAGLDRQQRRDLYAVRVEVRAMHRLRLEQQVVERLLEQGTDFGEGPVVT
GGDGSGCTHGEDSFDACMAPFVGEPRHAGVRLKGHHKWL*
AnnotationID:7154GeneID:7154
AnnotatorUID: diggins
Modification Date/Time: 2005-03-28 04:04:47
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13950
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31378
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50156How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6372281Stop: 6370866
Length: 1416
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGATTGGCCAGGCCGAGGTAGTCGTTGGAACAGAAGGCCAGCAGCGGCTGGCCGTCGACCACGACGTCCGG
GCCCTGGGCCGACTCCAGCAGCGGCCGCTGGCGGTAGAGGTCTTCCGCGCGCCGGCTGGCGAGGCGGGAAGC
GAGATCGAAGGACATGGCAGGTCGCTCGTGTTGCTGGACGGACGCAGGCGCACCCGTCCACGCAGGGCCGAC
ATCAGCGGCTGCAACGAAGGGACGGCGGCGCCCTCCCTTCCAGTATGGTCAGGCGGAAGCGGCGTTATAGAA
CAGCTTCGATTCGCGTTGTTCCACCAACGCCTGCTCGATGGCGGCCTGGTGCACTTCGTCGGCGTGCTCTTC
GCGCTCTTCCGGCTTGATGCCGAGACGGGCGAACAACTGCATGTCCTTTTCGGCCTGCGGGTTCTTCGTGGT
CAGCAGCTTTTCGCCGTAAAAGATCGAGTTGGCCCCGGCCATGAAGGCCAGCGCCTGCATCTGCTCGTTCAT
CTGCTCGCGGCCGGCGGACAGGCGCACGTGGGACTTCGGCATCATGATCCGGGCCACCGCCAGGGTGCGGAT
GAAGTCGAAGGGATCGACGTCCTTCTCTTCCGCCAGGGGCGTGCCCTTGACCTTCACCAGCATGTTGATCGG
CACCGACTCCGGGTGCTCCGGCAGGTTCGCCAACTGGATCAGCAGGCCGGCGCGGTCGTCCACCGACTCGCC
CATGCCGAGGATGCCGCCGGAGCAGATCTTCATCCCCGCCTCGCGCACGTAGGCCAGGGTCTGCAGGCGCTC
GCTGTAGGTGCGGGTGGTGATGATGTTGCCGTAGAACTCCGGCGAGGTATCCAGGTTGTGGTTGTAGTAGTC
GAGGCCGGCGTCCGCCAGCGCCTGGGTCTGTTCCTGGGTCAGGCGGCCGAGGGTCATGCAGGTCTCCAGGCC
GAGCTTCTTCACGCCCTTGACCATCTCCAGGACGTAGGGCATGTCCTTGGCCGACGGGTGCTTCCAGGCAGC
GCCCATGCAGAAGCGGGTCGAACCGATGGCCTTGGCCTCGGCCGCCGCCTCGAGGACCTTCTGCACCTCCAT
CAGCTTCTCCTTGTCCAGGCCGGTGTTGTAGTGGCCGGACTGCGGGCAGTACTTGCAGTCCTCGGGACAGGC
GCCGGTCTTGATCGACAGCAGCGTCGAGACCTGTACGCGGTTCGGGTCGAAGTACGCGCGATGCACCGTCTG
CGCCTGGAACAGCAGGTCGTTGAACGGCTGCTCGAACAGGGCACGGACTTCGGCGAGGGACCAGTCGTGACG
GGTGGCGACGGAAGCGGTTGCACTCATGGGGAAGATTCCTTCGACGCTTGCATGGCGCCTTTTGTCGGGGAG
CCCCGGCACGCCGGGGTCAGGCTTAAGGGGCATCATAAGTGGCTCTAG