ViewGene

Locus Name:
GeneID:
Location:

GeneID:7152
TrivialName: PA14_06440
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_06440
PAO1 Ortholog Locus:
Sequence Length:1410
Protein Length:469
Start: 567184
Stop: 565775
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGTTGGCGTGCATCTCAAACCTCCTGCGCGGCGGCGGTCCGCTCGGCGAGCCAGGTTTCCAGGGTAGCGGT
ATCGAACTGCGCGGCCTGTACCCGCGCATCGGCGAGCAGCCAGCGGTGCAGCGGCAGGGTAGTGGCCATGCC
GGCCAGCACGGTGCGCTCCAGCGCCTGGCGCGCGCGGGCGAACGCTTCGTCGCGGTCGCGACCATGGACGAT
CAGCTTGGCCAGCAACGAATCGTAGTACGGCGGCACCCGGTAGCCGGGATACAGGTGGCTGTCCACTCGCAC
GCCCTCGCCCTGCGGCCATTCCAGGCGCTCCACGGTGCCGGGGCTGGGGAAGAAATTGCGCGCCGGGTCTTC
GGCGTTGATCCGCATCTCCAGCGCCGCGCCGTTCAGGCGAATGTCCTCCTGGCGCCAGGGCAGCGCCTCGCC
GGCGGCGATGCGCAGCATGGCCTGGACCAGGTCGATGCCGGTGACCATCTCGCTGACCGGATGCTCGACCTG
GATACGGGTGTTCATCTCGATGAAGAAGAACTCGCCGCTGTGCGCGTCGAACAGGTATTCCAGGGTGCCCGC
GCCACGATAGCCGAGACTCTGCGCCAGGCGCACCGCGCTCTCGCAGAGGGCCTGGCGCTGCGCGCCGTCCAG
CGCCGCCGAAGGTGCCTCCTCGAAGACCTTCTGGCGCCGCCGCTGCAGCGAGCATTCGCGTTCGAACAGATG
CACCGCGCGCTCGCCATCGCCGAGGATCTGCACTTCGATGTGCCGCGCCTGGCGGATGAAGCGCTCCAGGTA
CACCGCCGGCGAACCGAAGGCGGCCTGCGCCTCGCGCTGGGCGATGGGGAATTCCCGACGCAGTTCGTCGGC
GTCGTGGGCGATACGGATGCCACGCCCGCCGCCGCCAGCGGAGGCCTTGACCAGCAGCGGATAGCCGACCTC
TTCGGCGCAGGCCAGCGCCGCGTCGAGGTCGTCCAGCTCGCCGGGCGAGCCCGGCACCACCGGCACCCCGGC
GGCCATCGCGGTACGCCGCGCCTCGGCCTTGTCGCCCATGCGGCGGATGGTCTGCGCATCCGGACCGACGAA
GACCAGTCCGGCCGCCTGCACCGCTTCGGCGAAGGCAGGGTTCTCGGAGAGGAAACCGTAGCCGGGATGGAT
CGAGTCGGCACCGGTTTCCCGCGCCGCCATGAGAATCGCCTCAATATCCAGGTAGCTCCGCTCGGCCCGCGC
AGGGCCGATCAGACGTACCTCATCGGCCAGCCGCGCGGCCAGCGAATCGCGATCCGCCTCGCTGCACACCGC
TACCGTGGGAATGCCCAGTGCCTGCGCGGCGCGGATGATGCGCACGGCGATCTCGCCGCGATTGGCCACCAG
CAGCTTGTTCAGTCGCTTGTGCATGGCGTCCTCCTCAGGTAG
Translation:
MLACISNLLRGGGPLGEPGFQGSGIELRGLYPRIGEQPAVQRQGSGHAGQHGALQRLARAGERFVAVATMDD
QLGQQRIVVRRHPVAGIQVAVHSHALALRPFQALHGAGAGEEIARRVFGVDPHLQRRAVQANVLLAPGQRLA
GGDAQHGLDQVDAGDHLADRMLDLDTGVHLDEEELAAVRVEQVFQGARATIAETLRQAHRALAEGLALRAVQ
RRRRCLLEDLLAPPLQRAFAFEQMHRALAIAEDLHFDVPRLADEALQVHRRRTEGGLRLALGDGEFPTQFVG
VVGDTDATPAAASGGLDQQRIADLFGAGQRRVEVVQLAGRARHHRHPGGHRGTPRLGLVAHAADGLRIRTDE
DQSGRLHRFGEGRVLGEETVAGMDRVGTGFPRRHENRLNIQVAPLGPRRADQTYLIGQPRGQRIAIRLAAHR
YRGNAQCLRGADDAHGDLAAIGHQQLVQSLVHGVLLR*
AnnotationID:7152GeneID:7152
AnnotatorUID: diggins
Modification Date/Time: 2005-03-27 17:05:13
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13947
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31374
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50154How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6368526Stop: 6367117
Length: 1410
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGTTGGCGTGCATCTCAAACCTCCTGCGCGGCGGCGGTCCGCTCGGCGAGCCAGGTTTCCAGGGTAGCGGT
ATCGAACTGCGCGGCCTGTACCCGCGCATCGGCGAGCAGCCAGCGGTGCAGCGGCAGGGTAGTGGCCATGCC
GGCCAGCACGGTGCGCTCCAGCGCCTGGCGCGCGCGGGCGAACGCTTCGTCGCGGTCGCGACCATGGACGAT
CAGCTTGGCCAGCAACGAATCGTAGTACGGCGGCACCCGGTAGCCGGGATACAGGTGGCTGTCCACTCGCAC
GCCCTCGCCCTGCGGCCATTCCAGGCGCTCCACGGTGCCGGGGCTGGGGAAGAAATTGCGCGCCGGGTCTTC
GGCGTTGATCCGCATCTCCAGCGCCGCGCCGTTCAGGCGAATGTCCTCCTGGCGCCAGGGCAGCGCCTCGCC
GGCGGCGATGCGCAGCATGGCCTGGACCAGGTCGATGCCGGTGACCATCTCGCTGACCGGATGCTCGACCTG
GATACGGGTGTTCATCTCGATGAAGAAGAACTCGCCGCTGTGCGCGTCGAACAGGTATTCCAGGGTGCCCGC
GCCACGATAGCCGAGACTCTGCGCCAGGCGCACCGCGCTCTCGCAGAGGGCCTGGCGCTGCGCGCCGTCCAG
CGCCGCCGAAGGTGCCTCCTCGAAGACCTTCTGGCGCCGCCGCTGCAGCGAGCATTCGCGTTCGAACAGATG
CACCGCGCGCTCGCCATCGCCGAGGATCTGCACTTCGATGTGCCGCGCCTGGCGGATGAAGCGCTCCAGGTA
CACCGCCGGCGAACCGAAGGCGGCCTGCGCCTCGCGCTGGGCGATGGGGAATTCCCGACGCAGTTCGTCGGC
GTCGTGGGCGATACGGATGCCACGCCCGCCGCCGCCAGCGGAGGCCTTGACCAGCAGCGGATAGCCGACCTC
TTCGGCGCAGGCCAGCGCCGCGTCGAGGTCGTCCAGCTCGCCGGGCGAGCCCGGCACCACCGGCACCCCGGC
GGCCATCGCGGTACGCCGCGCCTCGGCCTTGTCGCCCATGCGGCGGATGGTCTGCGCATCCGGACCGACGAA
GACCAGTCCGGCCGCCTGCACCGCTTCGGCGAAGGCAGGGTTCTCGGAGAGGAAACCGTAGCCGGGATGGAT
CGAGTCGGCACCGGTTTCCCGCGCCGCCATGAGAATCGCCTCAATATCCAGGTAGCTCCGCTCGGCCCGCGC
AGGGCCGATCAGACGTACCTCATCGGCCAGCCGCGCGGCCAGCGAATCGCGATCCGCCTCGCTGCACACCGC
TACCGTGGGAATGCCCAGTGCCTGCGCGGCGCGGATGATGCGCACGGCGATCTCGCCGCGATTGGCCACCAG
CAGCTTGTTCAGTCGCTTGTGCATGGCGTCCTCCTCAGGTAG