ViewGene

Locus Name:
GeneID:
Location:

GeneID:7139
TrivialName: PA14_05800
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_05800
PAO1 Ortholog Locus:
Sequence Length:1461
Protein Length:486
Start: 514481
Stop: 513021
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCCGGCGCCTCGATGGAAGCGCCACTCAGGCCGCCAGGCGGCCGCCGGCGATCGCCTCGGAGGCCTTGAG
CATGGCCCGCAACAGCACCGCGCAGCCGGCGGCCAGGTCGTCGGGGCTGGCGTTCTCGATCTCGTTGTGGCT
GATGCCGTTCTCGCAGGGCACGAAGATCATCCCCGCCGGACCGAGTTCGGCGAGGAAGATCGCGTCGTGGCC
GGCGCCGCTGACGATGTCCATCTGCGGCATGCCCAGCGCCTGCGCCGCCTCGCGCACCGCGCCGACGCATCC
CTGGTCGAAGTACAGCGGCGGGAAATCGGCGGTCGGCACCAGCTCGTATTGCAAGCCATGCTTCTCGCAGGT
AGCGGCGATCACCTGGCGGACTTCGGCGATCATCGAGTCCAGGCGCTCCGGTTGCAGATGGCGGAAGTCCAG
GGTCATCTTCACTTCGCCGGGTATCACGTTGCGCGAACCGGGATAGGCGTGCAGGCAGCCGACCGTGCCGCA
AGCATGCGGCTGATGGCCGAGGGCCGCGCGATTGACCGCCTCGACCACCGCCGCGGCACCGACCAGGGCGTC
CTTGCGCAGGTGCATCGGCGTTGGCCCGGCGTGTGCCTCGACGCCGCGCAGGGACAGGTCGAACCATTTCTG
CCCGAGCGCGCCGAGCACCACGCCGATGGTCTTCTCCTCGTCCTCGAGGATCGGCCCCTGTTCGATGTGCGC
CTCGAAATAGGCGCCCACCGGATGTCCGAGACAATCGCGCGCTCCCGCGTAGCCGATGGCGTCCAGCGCCTC
GCCTACGCTGACACCGTCGGCATCGCGCTTGGCCAGGGTCTCCTCCAGGGTGAACTTCCCGGCGAATACGCC
CGAGCCCATCATGCAGGGCGCGAAGCGCGAGCCTTCCTCGTTGGTCCACACCACCACCTCCAGCGGCGCCTC
GGTTTCCACCCCGAGGTCGTTGAGGGTGCGGATCACCTCGAGGCCGGCCATCACCCCGAAGCAGCCGTCGAA
CTTGCCACCGGTGGGCTGGGTGTCGATGTGGCTACCGGTCATCACCGGGGGCAAGTCCGGGTTACGCCCGGG
ACGACGGGCGAAGATGTTGCCGACCCGATCGACGCTGACCGTGCAGCCGGCCGCTTCGCACCATTGCACGAA
GAGATCGCGGGCCTGGCGGTCGAGATCGCTCAGGGCCAGGCGGCAGACCCCACCCTTGGCGGTGGCGCCGAG
GCGGGCGAGATCCATCAGCGATTGCCAGAGGCGCTGGCCATCGATGTGTCGCTGGGTGGATTGCAGGACGTT
CCGGGCAGTGCTCATTGTCGTCTCCTCAGGCTTGGAGTAGGTGTCGGCGGCTCGCCGGCCGCCTGTATGCCC
ATCAGGGCAGCGGTTTGGCCAATGCCGCCGGGCTCCGCGCACGGCGGCCGCAGAGGCCGTAGTAGAGCGCGC
CGCCGAGCAGCGAGCCGGTGA
Translation:
MPAPRWKRHSGRQAAAGDRLGGLEHGPQQHRAAGGQVVGAGVLDLVVADAVLAGHEDHPRRTEFGEEDRVVA
GAADDVHLRHAQRLRRLAHRADASLVEVQRREIGGRHQLVLQAMLLAGSGDHLADFGDHRVQALRLQMAEVQ
GHLHFAGYHVARTGIGVQAADRAASMRLMAEGRAIDRLDHRRGTDQGVLAQVHRRWPGVCLDAAQGQVEPFL
PERAEHHADGLLLVLEDRPLFDVRLEIGAHRMSETIARSRVADGVQRLAYADTVGIALGQGLLQGELPGEYA
RAHHAGREARAFLVGPHHHLQRRLGFHPEVVEGADHLEAGHHPEAAVELATGGLGVDVATGHHRGQVRVTPG
TTGEDVADPIDADRAAGRFAPLHEEIAGLAVEIAQGQAADPTLGGGAEAGEIHQRLPEALAIDVSLGGLQDV
PGSAHCRLLRLGVGVGGSPAACMPIRAAVWPMPPGSAHGGRRGRSRARRRAASR*
AnnotationID:7139GeneID:7139
AnnotatorUID: diggins
Modification Date/Time: 2005-03-25 13:01:01
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13925
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31348
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50141How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6315823Stop: 6314363
Length: 1461
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCCGGCGCCTCGATGGAAGCGCCACTCAGGCCGCCAGGCGGCCGCCGGCGATCGCCTCGGAGGCCTTGAG
CATGGCCCGCAACAGCACCGCGCAGCCGGCGGCCAGGTCGTCGGGGCTGGCGTTCTCGATCTCGTTGTGGCT
GATGCCGTTCTCGCAGGGCACGAAGATCATCCCCGCCGGACCGAGTTCGGCGAGGAAGATCGCGTCGTGGCC
GGCGCCGCTGACGATGTCCATCTGCGGCATGCCCAGCGCCTGCGCCGCCTCGCGCACCGCGCCGACGCATCC
CTGGTCGAAGTACAGCGGCGGGAAATCGGCGGTCGGCACCAGCTCGTATTGCAAGCCATGCTTCTCGCAGGT
AGCGGCGATCACCTGGCGGACTTCGGCGATCATCGAGTCCAGGCGCTCCGGTTGCAGATGGCGGAAGTCCAG
GGTCATCTTCACTTCGCCGGGTATCACGTTGCGCGAACCGGGATAGGCGTGCAGGCAGCCGACCGTGCCGCA
AGCATGCGGCTGATGGCCGAGGGCCGCGCGATTGACCGCCTCGACCACCGCCGCGGCACCGACCAGGGCGTC
CTTGCGCAGGTGCATCGGCGTTGGCCCGGCGTGTGCCTCGACGCCGCGCAGGGACAGGTCGAACCATTTCTG
CCCGAGCGCGCCGAGCACCACGCCGATGGTCTTCTCCTCGTCCTCGAGGATCGGCCCCTGTTCGATGTGCGC
CTCGAAATAGGCGCCCACCGGATGTCCGAGACAATCGCGCGCTCCCGCGTAGCCGATGGCGTCCAGCGCCTC
GCCTACGCTGACACCGTCGGCATCGCGCTTGGCCAGGGTCTCCTCCAGGGTGAACTTCCCGGCGAATACGCC
CGAGCCCATCATGCAGGGCGCGAAGCGCGAGCCTTCCTCGTTGGTCCACACCACCACCTCCAGCGGCGCCTC
GGTTTCCACCCCGAGGTCGTTGAGGGTGCGGATCACCTCGAGGCCGGCCATCACCCCGAAGCAGCCGTCGAA
CTTGCCACCGGTGGGCTGGGTGTCGATGTGGCTACCGGTCATCACCGGGGGCAAGTCCGGGTTACGCCCGGG
ACGACGGGCGAAGATGTTGCCGACCCGATCGACGCTGACCGTGCAGCCGGCCGCTTCGCACCATTGCACGAA
GAGATCGCGGGCCTGGCGGTCGAGATCGCTCAGGGCCAGGCGGCAGACCCCACCCTTGGCGGTGGCGCCGAG
GCGGGCGAGATCCATCAGCGATTGCCAGAGGCGCTGGCCATCGATGTGTCGCTGGGTGGATTGCAGGACGTT
CCGGGCAGTGCTCATTGTCGTCTCCTCAGGCTTGGAGTAGGTGTCGGCGGCTCGCCGGCCGCCTGTATGCCC
ATCAGGGCAGCGGTTTGGCCAATGCCGCCGGGCTCCGCGCACGGCGGCCGCAGAGGCCGTAGTAGAGCGCGC
CGCCGAGCAGCGAGCCGGTGA