ViewGene

Locus Name:
GeneID:
Location:

GeneID:7135
TrivialName: PA14_05730
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_05730
PAO1 Ortholog Locus:
Sequence Length:1485
Protein Length:494
Start: 506741
Stop: 508225
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 133/474 (28%), Positives = 164/474 (34%), Gaps = 99/474 (20%)
Sequence:
TTGCGCGTCGTCGGACCGCAGCGGCACGCAGGAAGCGTGCCGGCGCGCGGCAGGGCGGCGTCCGCCGGGGAT
GCGGGCGCCGCCCTGCGTTCAGGAGGCTTCGCGGTAGGGGTTGCGCGGATCCTGGGTCCAGTTGAGATAGGG
CTTGCCGGTGTCCTGCGGCACCATTTCGATGCAGTTCTCCACCGGACAGGTGATCTGGCACAGGTTGCAGCC
CACGCACTCGGCGTCGATCACTTCGTAGCGGTGCGTACCGTCGGCCCGGGGCAGGCTGGCGATGGCCTGGTG
CGAGGTGTCCTCGCAGGCGATATGGCAGCGGCCGCAACCGATGCAGGCGTCCTGGTCGATGCGGGCGATCAC
CTGGTAGTTGATGTCCAGGTACTTCCAGTCGGTGGTATTGCCCACCGCGCCGCCGCTGAAATCGGACAGCCG
CTGGTAGCCATGGCTGTCCATCCAGCGCGCGAGACCGTCCTGCATGTCCTCGACGATACGGAAGCCGTGCAG
CATCGCCGCCGTGCATACCTGCACCGCGCCGCAGCCGAGCGCGACGAATTCCGCTGCGTCGCGCCAACTGCC
GATACCGCCGATGCCACAGATCGGCAGGCCGCGGGTCTGCGGGTCGCGGGCGATCTCGGCGACCATGTTCAG
GGCGATCGGCTTCACCGCCGAGCCGCAGTAGCCGCCGTGGGTGCTCTGGGTGCCGACCACGGGCAGGGCGAC
CATGCGCTCCAGGTCGACGCTGGTGATCGAGTTGATGGTGTTGATCAGCGACACCGCGTCGGCGCCGCCGCG
ATGGGCGGCGCGCGCCGACTGGCGGATGTCGGTGATGTTGGGGGTGAGCTTGACGATCACCGGCAGCGAGCA
GTGGGTCTTGCACCAGCGGGTGACCATCTCCACGTACTCCGGTACCTGGCCCACCGCCGCGCCCATGCCGCG
CTCGGGCATGCCGTGGGGGCAACCGAAGTTCAGCTCGATACCGTCGGCGCCGGTGGCTTCCACCAGCGGCAG
GATGTATTTCCACGACTCCTCGACGCAGGGCACCATCAGCGACACGATCAGCGCGCGGTCTGGCCAGTCCTT
CTTCACCTGGGCGATCTCGCGCAGGTTGATCTCCAGCGAGCGGTCGGTGATCAGCTCGATGTTGTTGATCCC
CTGCACCTGGCGGTTCGGTCCGAAGTGCGCGGAATAACGCGACGACACGTTGACCGCCGCGGGGTCTTCGCC
GAGGGTCTTCCAGACCACCCCGCCCCAGCCCGCCTGGTAGGCGCGGACCACGTTGTAGGCCTTGTCGGTGGG
CGGCGCGGAGGCCAGCCAGAAGGGGTTGGGCGACTTGATGCCGGCGAATTCGATAGACAGGTCGGCCATCAC
GCAGCCTCCACGTTGAGCATGAGTTGGGCGTGGATCGCTTCCGCCGCCAGTTTGCCGTGCTGCACCGCCTGC
ACGGTGAGGTCCTCGCCGAGCGCCACGCAGTCGCCGCCGGCGTAG
Translation:
MRVVGPQRHAGSVPARGRAASAGDAGAALRSGGFAVGVARILGPVEIGLAGVLRHHFDAVLHRTGDLAQVAA
HALGVDHFVAVRTVGPGQAGDGLVRGVLAGDMAAAATDAGVLVDAGDHLVVDVQVLPVGGIAHRAAAEIGQP
LVAMAVHPARETVLHVLDDTEAVQHRRRAYLHRAAAERDEFRCVAPTADTADATDRQAAGLRVAGDLGDHVQ
GDRLHRRAAVAAVGALGADHGQGDHALQVDAGDRVDGVDQRHRVGAAAMGGARRLADVGDVGGELDDHRQRA
VGLAPAGDHLHVLRYLAHRRAHAALGHAVGATEVQLDTVGAGGFHQRQDVFPRLLDAGHHQRHDQRAVWPVL
LHLGDLAQVDLQRAVGDQLDVVDPLHLAVRSEVRGITRRHVDRRGVFAEGLPDHPAPARLVGADHVVGLVGG
RRGGQPEGVGRLDAGEFDRQVGHHAASTLSMSWAWIASAASLPCCTACTVRSSPSATQSPPA*
AnnotationID:7135GeneID:7135
AnnotatorUID: diggins
Modification Date/Time: 2005-03-25 12:12:37
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16857
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31340
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50137How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6308083Stop: 6309567
Length: 1485
Start Codon: TTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCGCGTCGTCGGACCGCAGCGGCACGCAGGAAGCGTGCCGGCGCGCGGCAGGGCGGCGTCCGCCGGGGAT
GCGGGCGCCGCCCTGCGTTCAGGAGGCTTCGCGGTAGGGGTTGCGCGGATCCTGGGTCCAGTTGAGATAGGG
CTTGCCGGTGTCCTGCGGCACCATTTCGATGCAGTTCTCCACCGGACAGGTGATCTGGCACAGGTTGCAGCC
CACGCACTCGGCGTCGATCACTTCGTAGCGGTGCGTACCGTCGGCCCGGGGCAGGCTGGCGATGGCCTGGTG
CGAGGTGTCCTCGCAGGCGATATGGCAGCGGCCGCAACCGATGCAGGCGTCCTGGTCGATGCGGGCGATCAC
CTGGTAGTTGATGTCCAGGTACTTCCAGTCGGTGGTATTGCCCACCGCGCCGCCGCTGAAATCGGACAGCCG
CTGGTAGCCATGGCTGTCCATCCAGCGCGCGAGACCGTCCTGCATGTCCTCGACGATACGGAAGCCGTGCAG
CATCGCCGCCGTGCATACCTGCACCGCGCCGCAGCCGAGCGCGACGAATTCCGCTGCGTCGCGCCAACTGCC
GATACCGCCGATGCCACAGATCGGCAGGCCGCGGGTCTGCGGGTCGCGGGCGATCTCGGCGACCATGTTCAG
GGCGATCGGCTTCACCGCCGAGCCGCAGTAGCCGCCGTGGGTGCTCTGGGTGCCGACCACGGGCAGGGCGAC
CATGCGCTCCAGGTCGACGCTGGTGATCGAGTTGATGGTGTTGATCAGCGACACCGCGTCGGCGCCGCCGCG
ATGGGCGGCGCGCGCCGACTGGCGGATGTCGGTGATGTTGGGGGTGAGCTTGACGATCACCGGCAGCGAGCA
GTGGGTCTTGCACCAGCGGGTGACCATCTCCACGTACTCCGGTACCTGGCCCACCGCCGCGCCCATGCCGCG
CTCGGGCATGCCGTGGGGGCAACCGAAGTTCAGCTCGATACCGTCGGCGCCGGTGGCTTCCACCAGCGGCAG
GATGTATTTCCACGACTCCTCGACGCAGGGCACCATCAGCGACACGATCAGCGCGCGGTCTGGCCAGTCCTT
CTTCACCTGGGCGATCTCGCGCAGGTTGATCTCCAGCGAGCGGTCGGTGATCAGCTCGATGTTGTTGATCCC
CTGCACCTGGCGGTTCGGTCCGAAGTGCGCGGAATAACGCGACGACACGTTGACCGCCGCGGGGTCTTCGCC
GAGGGTCTTCCAGACCACCCCGCCCCAGCCCGCCTGGTAGGCGCGGACCACGTTGTAGGCCTTGTCGGTGGG
CGGCGCGGAGGCCAGCCAGAAGGGGTTGGGCGACTTGATGCCGGCGAATTCGATAGACAGGTCGGCCATCAC
GCAGCCTCCACGTTGAGCATGAGTTGGGCGTGGATCGCTTCCGCCGCCAGTTTGCCGTGCTGCACCGCCTGC
ACGGTGAGGTCCTCGCCGAGCGCCACGCAGTCGCCGCCGGCGTAG