ViewGene

Locus Name:
GeneID:
Location:

GeneID:7134
TrivialName: PA14_05710
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_05710
PAO1 Ortholog Locus:
Sequence Length:1470
Protein Length:489
Start: 505408
Stop: 506877
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK23765.1| (AE005853) hypothetical protein [Caulobacter crescentus CB15]
Identities = 112/406 (27%), Positives = 154/406 (37%), Gaps = 60/406 (14%)
Sequence:
ATGGAGGACCTCTTCTGGTTTGTTCGGGCTGCGGCTCAGCAGGGGATTGAGCAGCAGGTAGGCGATGGCGGC
GCCGAGCACCGCGTTGACCGGCACGATCCCCGGCAGCCAGTGGCCGGCGGCGGTGCCGCAGGCGACGGCGAG
GATCGCCGCCCAGTTGATCGCCTGGATGTCCGCGCAGGGGTGCTGGCGGTAGCGCCGGCGGCGACTCAGGTA
GTCGGCGATGATCACCCCGCCGATGGGCGGGATGGCGGCGGAGAGGAAGGTCAGCCAGCCGACGAAGTGGTT
GTACAGCCAGAGCGCGGCGAGGGTGCCGAGGGCGCCGTTGAGCATCGCCAGGAAGCGGCTGGAGAGGCCGGT
GATGTTGGCGAAGCCGAGGCCGGAGGCATACAGCGCGTTGTCGTTGGTGGTCCAGATGTTCAGGCCGAGGAC
CAGGATCGCCGGGATCAGCAGGCCCTGGGCGATCATCACGTCGGAGATGTCCGACTTGCCCACCGCCGCCGC
GCCGGCCGCGCCGAAGATGAACATCAGCGAGTTGCCGAGGAAGAACGCCACCAGGCACACCACCACGGCGGT
ACGCGCGCTGCGGCCGAAGCGGACGAAGTCGGCGGTGAGGGTGCCGGCGCTGACGAACGAGCCGACCACCAG
GGCGATCGCGGTCGAGAGGCTCAGCGGCGCGCTCGGCGTCACCTGCTGCAGCGCCGCCAGGCCGCCGGCGTC
GCGCACCGCGAGCCATACCGAGTAGCTGCCGAGAACGACGATCGCCGGGACCGCGATGGCCGACAGCAGGGT
CAGACCGGCGATGCCGAAGAACACCGTGAGGGTCATCAGCGCTCCGGAAACCAGGATCAGCAGGTTGACGTC
GAGGCCGGTGGCCTTGGCCACCGGGATGGCGAACATCGCTACGCCGACGCCGAACCAGCCGACCTGGGTGCC
GCCGAGCAACGCCGAGGGCAGCCAGGAGCCCTTGCTGCCGAACGAGTAATGCGCCAGCAGGTGGGTGGAAAG
GCCGGTGCGCGCGCCGATGAAGCCGAGGATCGCGGTGTACAGGCCGAGCATCAGGTTGCCCAGCAGCACGGC
GAGGAAGAAGTCGTCGTAGCTCAGGCCGGTGCCGAGGGTGCCGCCGGTCCACATGCTGGCGGAAAAGAAGGT
CAGGCCGAGCATCACCACGCTCAGGGCCAGCGCGCTCTTGCGCGCCGCCAGCGGGACCGGTTGCTGGCTGTA
GTTGCTGTCTGCGGACATGCGCGAGTCTCCGTGGGGCGCCGGCCGTCCGGGAGCGTCGGCCGGGCCGCGGCG
AATGGTAGTCGAAGGCGGGTCGATCCGACAGACGCCGTTGCGCGTCGTCGGACCGCAGCGGCACGCAGGAAG
CGTGCCGGCGCGCGGCAGGGCGGCGTCCGCCGGGGATGCGGGCGCCGCCCTGCGTTCAGGAGGCTTCGCGGT
AGGGGTTGCGCGGATCCTGGGTCCAGTTGA
Translation:
MEDLFWFVRAAAQQGIEQQVGDGGAEHRVDRHDPRQPVAGGGAAGDGEDRRPVDRLDVRAGVLAVAPAATQV
VGDDHPADGRDGGGEEGQPADEVVVQPERGEGAEGAVEHRQEAAGEAGDVGEAEAGGIQRVVVGGPDVQAED
QDRRDQQALGDHHVGDVRLAHRRRAGRAEDEHQRVAEEERHQAHHHGGTRAAAEADEVGGEGAGADERADHQ
GDRGREAQRRARRHLLQRRQAAGVAHREPYRVAAENDDRRDRDGRQQGQTGDAEEHREGHQRSGNQDQQVDV
EAGGLGHRDGEHRYADAEPADLGAAEQRRGQPGALAAERVMRQQVGGKAGARADEAEDRGVQAEHQVAQQHG
EEEVVVAQAGAEGAAGPHAGGKEGQAEHHHAQGQRALARRQRDRLLAVVAVCGHARVSVGRRPSGSVGRAAA
NGSRRRVDPTDAVARRRTAAARRKRAGARQGGVRRGCGRRPAFRRLRGRGCADPGSS*
AnnotationID:7134GeneID:7134
AnnotatorUID: diggins
Modification Date/Time: 2005-03-25 12:12:45
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13916
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31338
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50136How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6306750Stop: 6308219
Length: 1470
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGAGGACCTCTTCTGGTTTGTTCGGGCTGCGGCTCAGCAGGGGATTGAGCAGCAGGTAGGCGATGGCGGC
GCCGAGCACCGCGTTGACCGGCACGATCCCCGGCAGCCAGTGGCCGGCGGCGGTGCCGCAGGCGACGGCGAG
GATCGCCGCCCAGTTGATCGCCTGGATGTCCGCGCAGGGGTGCTGGCGGTAGCGCCGGCGGCGACTCAGGTA
GTCGGCGATGATCACCCCGCCGATGGGCGGGATGGCGGCGGAGAGGAAGGTCAGCCAGCCGACGAAGTGGTT
GTACAGCCAGAGCGCGGCGAGGGTGCCGAGGGCGCCGTTGAGCATCGCCAGGAAGCGGCTGGAGAGGCCGGT
GATGTTGGCGAAGCCGAGGCCGGAGGCATACAGCGCGTTGTCGTTGGTGGTCCAGATGTTCAGGCCGAGGAC
CAGGATCGCCGGGATCAGCAGGCCCTGGGCGATCATCACGTCGGAGATGTCCGACTTGCCCACCGCCGCCGC
GCCGGCCGCGCCGAAGATGAACATCAGCGAGTTGCCGAGGAAGAACGCCACCAGGCACACCACCACGGCGGT
ACGCGCGCTGCGGCCGAAGCGGACGAAGTCGGCGGTGAGGGTGCCGGCGCTGACGAACGAGCCGACCACCAG
GGCGATCGCGGTCGAGAGGCTCAGCGGCGCGCTCGGCGTCACCTGCTGCAGCGCCGCCAGGCCGCCGGCGTC
GCGCACCGCGAGCCATACCGAGTAGCTGCCGAGAACGACGATCGCCGGGACCGCGATGGCCGACAGCAGGGT
CAGACCGGCGATGCCGAAGAACACCGTGAGGGTCATCAGCGCTCCGGAAACCAGGATCAGCAGGTTGACGTC
GAGGCCGGTGGCCTTGGCCACCGGGATGGCGAACATCGCTACGCCGACGCCGAACCAGCCGACCTGGGTGCC
GCCGAGCAACGCCGAGGGCAGCCAGGAGCCCTTGCTGCCGAACGAGTAATGCGCCAGCAGGTGGGTGGAAAG
GCCGGTGCGCGCGCCGATGAAGCCGAGGATCGCGGTGTACAGGCCGAGCATCAGGTTGCCCAGCAGCACGGC
GAGGAAGAAGTCGTCGTAGCTCAGGCCGGTGCCGAGGGTGCCGCCGGTCCACATGCTGGCGGAAAAGAAGGT
CAGGCCGAGCATCACCACGCTCAGGGCCAGCGCGCTCTTGCGCGCCGCCAGCGGGACCGGTTGCTGGCTGTA
GTTGCTGTCTGCGGACATGCGCGAGTCTCCGTGGGGCGCCGGCCGTCCGGGAGCGTCGGCCGGGCCGCGGCG
AATGGTAGTCGAAGGCGGGTCGATCCGACAGACGCCGTTGCGCGTCGTCGGACCGCAGCGGCACGCAGGAAG
CGTGCCGGCGCGCGGCAGGGCGGCGTCCGCCGGGGATGCGGGCGCCGCCCTGCGTTCAGGAGGCTTCGCGGT
AGGGGTTGCGCGGATCCTGGGTCCAGTTGA