ViewGene
Locus Name:
GeneID:
Location:

GeneID:7133
TrivialName: PA14_05670
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_05670
PAO1 Ortholog Locus:
Sequence Length:1074
Protein Length:357
Start: 505098
Stop: 504025
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK62477.1| (AY034092) putative DNA-invertase [Micrococcus sp. 28]
Identities = 115/375 (30%), Positives = 129/375 (34%), Gaps = 83/375 (22%)
Sequence:
ATGGCAGATCGCCAACGGCGTGCAGCACGTGCGCAGCCACGTCGACGTCTCCGACCCGACCCTCACCGCGCT
CAAGGCCATGCTCGAGGTGCGCGGCGAAGTGGCGCCCTGGGTCGACCTGCAGATCGTCGCCTTCCCTCAGGA
GGGCATTCTCTCCTACCCCAACGGCCTGGAACTGCTGGAGGAGTCGCTGCGCCTGGGCGCCGACGTGGTGGG
GGCGATCCCGCATTTCGAATTCACCCGCGAGCTGGGCGTCGAGTCGCTGCACAAGGCCATCGACCTGGCCAA
GCGCTACGACCTGCCGGTGGACGTGCATTGCGACGAGATCGACGACGAGCAGTCGCGCTTCCTCGAGACCCT
GGCCATGCTCGCCCATCGCGACGGCCTCGGCGCACGGGTCACCGCCAGCCACACCACGGCGATGCACTCCTA
CAACGGCGCCTACACCTCGCGGCTGTTCCGCCTGCTGAAACTGTCGGGAATCAACTTCGTCGCCAACCCGCT
GGTGAACATCCACCTGCAGGGTCGCTTCGACGACTACCCGAAGCGCCGCGGCATCACCCGGGTCAAGGAACT
GCTCGGTGCCGGGATCAACACCTGCTTCGGCCACGACGACGTGTTCGACCCCTGGTACCCGCTGGGCACCGC
GAACATGCTGCAGGTGCTGCACATGGGCCTGCACGTGACGCAGATGATGGGCTACGACGAGATCGACGGCGG
CCTCGACCTGATCACCCGCAACAGCGCCCGCACCCTCGGCCTGCGGGAATACGGCATCGAGGTCGGCCATCC
GGCCAACCTGCTGGTGCTGCCGGCCCGCGACGGCTTCGACGCGGTGCGCCGGCAGGTCCCGGTGCGCTACTC
GATCCGCGGCGGACGGCTGCTCGCCGAGACGGTCCCGGCGCAGACCACGGTGTTCCTCGAACAGGCGGAAGC
GGTGGACTTCACCCGCGCCAGCTGAGCCATCGCCGGAGCCTTCTAGCGAAGGCTCCGCTGCTCAGGGCTCCA
ATCCGATTCCGCGCAGGACCACGCTGGTCACCGTCTGTACCGCCCTTTCGAACTGCATGTCGCTGA
Translation:
MADRQRRAARAQPRRRLRPDPHRAQGHARGARRSGALGRPADRRLPSGGHSLLPQRPGTAGGVAAPGRRRGG
GDPAFRIHPRAGRRVAAQGHRPGQALRPAGGRALRRDRRRAVALPRDPGHARPSRRPRRTGHRQPHHGDALL
QRRLHLAAVPPAETVGNQLRRQPAGEHPPAGSLRRLPEAPRHHPGQGTARCRDQHLLRPRRRVRPLVPAGHR
EHAAGAAHGPARDADDGLRRDRRRPRPDHPQQRPHPRPAGIRHRGRPSGQPAGAAGPRRLRRGAPAGPGALL
DPRRTAARRDGPGADHGVPRTGGSGGLHPRQLSHRRSLLAKAPLLRAPIRFRAGPRWSPSVPPFRTACR*
AnnotationID:7133GeneID:7133
AnnotatorUID: diggins
Modification Date/Time: 2005-03-25 12:12:30
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:13914




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:31336




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 50135How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 6306440Stop: 6305367

          
Length: 1074


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGGCAGATCGCCAACGGCGTGCAGCACGTGCGCAGCCACGTCGACGTCTCCGACCCGACCCTCACCGCGCT 
CAAGGCCATGCTCGAGGTGCGCGGCGAAGTGGCGCCCTGGGTCGACCTGCAGATCGTCGCCTTCCCTCAGGA 
GGGCATTCTCTCCTACCCCAACGGCCTGGAACTGCTGGAGGAGTCGCTGCGCCTGGGCGCCGACGTGGTGGG 
GGCGATCCCGCATTTCGAATTCACCCGCGAGCTGGGCGTCGAGTCGCTGCACAAGGCCATCGACCTGGCCAA 
GCGCTACGACCTGCCGGTGGACGTGCATTGCGACGAGATCGACGACGAGCAGTCGCGCTTCCTCGAGACCCT 
GGCCATGCTCGCCCATCGCGACGGCCTCGGCGCACGGGTCACCGCCAGCCACACCACGGCGATGCACTCCTA 
CAACGGCGCCTACACCTCGCGGCTGTTCCGCCTGCTGAAACTGTCGGGAATCAACTTCGTCGCCAACCCGCT 
GGTGAACATCCACCTGCAGGGTCGCTTCGACGACTACCCGAAGCGCCGCGGCATCACCCGGGTCAAGGAACT 
GCTCGGTGCCGGGATCAACACCTGCTTCGGCCACGACGACGTGTTCGACCCCTGGTACCCGCTGGGCACCGC 
GAACATGCTGCAGGTGCTGCACATGGGCCTGCACGTGACGCAGATGATGGGCTACGACGAGATCGACGGCGG 
CCTCGACCTGATCACCCGCAACAGCGCCCGCACCCTCGGCCTGCGGGAATACGGCATCGAGGTCGGCCATCC 
GGCCAACCTGCTGGTGCTGCCGGCCCGCGACGGCTTCGACGCGGTGCGCCGGCAGGTCCCGGTGCGCTACTC 
GATCCGCGGCGGACGGCTGCTCGCCGAGACGGTCCCGGCGCAGACCACGGTGTTCCTCGAACAGGCGGAAGC 
GGTGGACTTCACCCGCGCCAGCTGAGCCATCGCCGGAGCCTTCTAGCGAAGGCTCCGCTGCTCAGGGCTCCA 
ATCCGATTCCGCGCAGGACCACGCTGGTCACCGTCTGTACCGCCCTTTCGAACTGCATGTCGCTGA