ViewGene

Locus Name:
GeneID:
Location:

GeneID:7131
TrivialName: PA14_05610
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_05610
PAO1 Ortholog Locus:
Sequence Length:1458
Protein Length:485
Start: 497415
Stop: 498872
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCGAACGGGGCAGGCGCATGGCGCCTGCCCCGTGGTCCGCTTAGTAGCGATAGGTGTCCGGCTTGAACGG
GCCTTCCACGCTCACGCCGATGTACTCGGCCTGTTTCGGGGTCAGCTGGGTGACCACGCCGCCGAAGCCCTT
GACCATCTCCAGGGCCACTTCCTCGTCGAGCTTCTTCGGCAGCACTTCGACGCTCAGGCGCTTGGCCTTCTC
GGCGGCCGGCAGGTCGGCGTACTTCTGCTCGAACAGGTGGATCTGCGCCAGCACCTGGTTGGCGAAGGAACC
GTCCATGATCCGGCTCGGATGGCCGGTTGCGTTGCCCAGGTTGACCAGGCGGCCCTCAGCGAGAAGGATCAG
GTAGTCGTCGTTGTACGCGTCGAAACCGTCCTTGCCGGTGCGGTGGATCTTGTGCACCTGCGGCTTGACCTC
TTCCCAGGCCCAGTTCTTGCGCATGAAGGCGGTGTCGATCTCGTTGTCGAAGTGGCCGATGTTGCAGACCAC
CGCGCGTTTCTTCAGCGCCTTGAGCATGTTGGCGTCGCAGACGTTGACGTTGCCGGTGGTGGTGACGATCAG
GTCGATCTTGCCCAGCAGCGCGGCGTCGATGCTGGCCTCGGTGCCGTCGTTGATGCCGTTCTTGTACGGCGA
GACGACTTCGAAGCCGTCCATGCAGGCCTGCATGGCGCAGATCGGGTCGACTTCCGCGACCTTGACGATCAT
GCCTTCCTGGCGCAGCGACTGCGAGGAGCCCTTGCCCACGTCGCCGTAGCCGATCACCAGGGCCTGCTTGCC
CGACAGCAGGTGGTCGGTGCCGCGCTTGATGGCGTCGTTGAGGCTATGGCGGCAGCCGTACTTGTTGTCGTT
CTTGCTCTTGGTCACCGAGTCGTTGACGTTGATCGCCGGGACTTTCAGGGTGCCGTTCTTGAGCATGTCGAG
CAGGCGGTGGACCCCGGTGGTGGTCTCTTCGGTGATGCCGTGGATGCGCTCGAGCATCTGCGGGTATTTCTT
GTGCAGGATCTCGGTCAGGTCACCGCCGTCGTCCAGCACCATGTTGGCGTCCCACGGCTGGCCGTCCTTGAG
GATGGTCTGCTCGATGCACCATTCGTACTCTTCCTCGGTCTCGCCCTTCCAGGCGAACACCGGGATGCCGGC
TGCGGCGATGGCGGCGGCGGCCTGGTCCTGGGTGGAGAAGATGTTGCAGCTCGACCAGCGGACTTCGGCGCC
CAGCGCGACCAGGGTCTCGATCAGCACGCCGGTCTGGATGGTCATGTGGATGCAACCGAGGATCTTCGCGCC
TTTCAGCGGCTGCTGGCCGGCATACTTGCGGCGCAGGCCCATCAGTGCGGGCATTTCCGATTCGGCGATGAT
CAGCTCGCGGCGGCCCCAGGCGGCCAGGGTGATGTCGGCGACCTTGTAGTCGGTGAAACCGGCGGGCGTCAT
GACAGCGCTCATGCGTAA
Translation:
MRTGQAHGACPVVRLVAIGVRLERAFHAHADVLGLFRGQLGDHAAEALDHLQGHFLVELLRQHFDAQALGLL
GGRQVGVLLLEQVDLRQHLVGEGTVHDPARMAGCVAQVDQAALSEKDQVVVVVRVETVLAGAVDLVHLRLDL
FPGPVLAHEGGVDLVVEVADVADHRAFLQRLEHVGVADVDVAGGGDDQVDLAQQRGVDAGLGAVVDAVLVRR
DDFEAVHAGLHGADRVDFRDLDDHAFLAQRLRGALAHVAVADHQGLLARQQVVGAALDGVVEAMAAAVLVVV
LALGHRVVDVDRRDFQGAVLEHVEQAVDPGGGLFGDAVDALEHLRVFLVQDLGQVTAVVQHHVGVPRLAVLE
DGLLDAPFVLFLGLALPGEHRDAGCGDGGGGLVLGGEDVAARPADFGAQRDQGLDQHAGLDGHVDATEDLRA
FQRLLAGILAAQAHQCGHFRFGDDQLAAAPGGQGDVGDLVVGETGGRHDSAHA*
AnnotationID:7131GeneID:7131
AnnotatorUID: diggins
Modification Date/Time: 2005-03-25 09:09:02
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13911
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31333
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50133How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6298757Stop: 6300214
Length: 1458
Start Codon: ATGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCGAACGGGGCAGGCGCATGGCGCCTGCCCCGTGGTCCGCTTAGTAGCGATAGGTGTCCGGCTTGAACGG
GCCTTCCACGCTCACGCCGATGTACTCGGCCTGTTTCGGGGTCAGCTGGGTGACCACGCCGCCGAAGCCCTT
GACCATCTCCAGGGCCACTTCCTCGTCGAGCTTCTTCGGCAGCACTTCGACGCTCAGGCGCTTGGCCTTCTC
GGCGGCCGGCAGGTCGGCGTACTTCTGCTCGAACAGGTGGATCTGCGCCAGCACCTGGTTGGCGAAGGAACC
GTCCATGATCCGGCTCGGATGGCCGGTTGCGTTGCCCAGGTTGACCAGGCGGCCCTCAGCGAGAAGGATCAG
GTAGTCGTCGTTGTACGCGTCGAAACCGTCCTTGCCGGTGCGGTGGATCTTGTGCACCTGCGGCTTGACCTC
TTCCCAGGCCCAGTTCTTGCGCATGAAGGCGGTGTCGATCTCGTTGTCGAAGTGGCCGATGTTGCAGACCAC
CGCGCGTTTCTTCAGCGCCTTGAGCATGTTGGCGTCGCAGACGTTGACGTTGCCGGTGGTGGTGACGATCAG
GTCGATCTTGCCCAGCAGCGCGGCGTCGATGCTGGCCTCGGTGCCGTCGTTGATGCCGTTCTTGTACGGCGA
GACGACTTCGAAGCCGTCCATGCAGGCCTGCATGGCGCAGATCGGGTCGACTTCCGCGACCTTGACGATCAT
GCCTTCCTGGCGCAGCGACTGCGAGGAGCCCTTGCCCACGTCGCCGTAGCCGATCACCAGGGCCTGCTTGCC
CGACAGCAGGTGGTCGGTGCCGCGCTTGATGGCGTCGTTGAGGCTATGGCGGCAGCCGTACTTGTTGTCGTT
CTTGCTCTTGGTCACCGAGTCGTTGACGTTGATCGCCGGGACTTTCAGGGTGCCGTTCTTGAGCATGTCGAG
CAGGCGGTGGACCCCGGTGGTGGTCTCTTCGGTGATGCCGTGGATGCGCTCGAGCATCTGCGGGTATTTCTT
GTGCAGGATCTCGGTCAGGTCACCGCCGTCGTCCAGCACCATGTTGGCGTCCCACGGCTGGCCGTCCTTGAG
GATGGTCTGCTCGATGCACCATTCGTACTCTTCCTCGGTCTCGCCCTTCCAGGCGAACACCGGGATGCCGGC
TGCGGCGATGGCGGCGGCGGCCTGGTCCTGGGTGGAGAAGATGTTGCAGCTCGACCAGCGGACTTCGGCGCC
CAGCGCGACCAGGGTCTCGATCAGCACGCCGGTCTGGATGGTCATGTGGATGCAACCGAGGATCTTCGCGCC
TTTCAGCGGCTGCTGGCCGGCATACTTGCGGCGCAGGCCCATCAGTGCGGGCATTTCCGATTCGGCGATGAT
CAGCTCGCGGCGGCCCCAGGCGGCCAGGGTGATGTCGGCGACCTTGTAGTCGGTGAAACCGGCGGGCGTCAT
GACAGCGCTCATGCGTAA