ViewGene

Locus Name:
GeneID:
Location:

GeneID:7129
TrivialName: PA14_05490
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_05490
PAO1 Ortholog Locus:
Sequence Length:1542
Protein Length:513
Start: 484708
Stop: 483167
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCGCTGCGAACCGGGAAGCGCAAGGCGCCGGAGCTTCCGGCGCCGGCGAAGGGAATCAATCGAACAGGCG
GGTGAACCAGGCGAACGGGTTCTTCTTCTCGCCGCCGGTCGTCGGTGCGGCTACCTTCTCGGCCTTCGCCAC
CATCGGCGCGCCCTCGATCACCGGCGTCTTGCCGGCGTACAGGTCGCGCACCTGGCTGGCGGCGCGCTTGCC
GCTGCGCAGCGCCCCCTCGATGGTGCCGGGGTACAGCGCATCGGTGTGCTCGCCGGCGAAGGCGACCCGCGA
CAGCGGCTGTTCCCAGATCCGCCAGAAGCGCGTCACCTGGCCCGGACCGTAGGCCAGGTAGGAACCGCCGGT
GCCCGGGTCGGCGCTGTAGCGACGAATTTCGTAGCCGCCGAAGGCACCGCGCATCTTCGGATAGAACTTGTT
CATGCGGATCAGCACCTGGTCGACCATCTGCCGGTCGCCGAAAGCCTGCAGCACGCGGGCGTTGTCGCCGGA
CAGGTTGATCAGCACGTTGGCGCCGCCTTTCAGCGCCGGCTCGACCCAGATCATGCCCAGGCCCTGGTCGCT
GAAGATCTCGCCGGAGAGGCGCGACTTGTCGTCCCACACCGGACGCTTGAACTTCAGCAGGATCTGGTCGCG
CCAGCCATAGTTGGTGCCCTTCAGCGCGGACATCTGGGTACCGCTCAGGGACGGGGTCATCTGGATCTGGCC
GAGCGCCTTCAGCGGCACGGCGAGAACCACGTAGTCGGCCTTGTAGGTCTCGCTGCCGGCCTTGACGGCGAC
GCCGTCCTTGGCCTGGACGATGCTCGACACCTTGGATTTGGTCTTGATCGTCTTGATCTGCTTGACGAAGGC
TTCCGCCAGCACCTGGCTGCCGCCGGGCAGGCGCGCCGCGCGCAGGTCGCGGTCGTCGACGCCACGGTAGGC
GCGGCCCTGCTGGGCGAGGTAGAGCAGCGACAGGCGCGACGGTTCGTCGTAGCGCGAACGGATACGCTGGTT
GACCAGCAGGCGCGCGGTCGGCGACAGGTTCAGCTTGTCCAGCCAGCGCGCGGCGTTCATCTGGTCGAGGGC
GAACAGGGTATTGCTCGAGGCAGGGTTGAGCGGGTCGGAGATCGATGCAGAGAGATCGTCCAGGGTCGACTC
GAAGCGCTTGAGGTCGGCGGCGACGTTCGGCTGCTTGAGCGCGAGATCGCTGCTGCTGTAGTACAGGCCGTC
GATCAGGTAGCTGGGGGTGCGGACGAAGTCCGGCGCCGGCACCGGCTTCAGCTTGAAGGTGTCCAGGTAGGC
ATTGAGCGTGGGCTGGACCTTCTGGTTGCCGACCCATTCGCTGGTGGCCAGGCCGGAACGCCCGCCCACCTG
CGGCCGCGCTTCGAGCACCGTGACCTGCCAGCCGTCCTTCTGCAATTCGTAGGCCGCGCTCAGGCCTGCCAG
GCCCGCGCCGACGACGATCGCCGTAGGCTGTTTATCCTTGCCCAGCGCCACCGCGCTGAACACCCCCAACAT
GAGAAACGCCGCGGCGCGCAGCCACCTTAA
Translation:
MRCEPGSARRRSFRRRRRESIEQAGEPGERVLLLAAGRRCGYLLGLRHHRRALDHRRLAGVQVAHLAGGALA
AAQRPLDGAGVQRIGVLAGEGDPRQRLFPDPPEARHLARTVGQVGTAGARVGAVATNFVAAEGTAHLRIELV
HADQHLVDHLPVAESLQHAGVVAGQVDQHVGAAFQRRLDPDHAQALVAEDLAGEARLVVPHRTLELQQDLVA
PAIVGALQRGHLGTAQGRGHLDLAERLQRHGENHVVGLVGLAAGLDGDAVLGLDDARHLGFGLDRLDLLDEG
FRQHLAAAGQARRAQVAVVDATVGAALLGEVEQRQARRFVVARTDTLVDQQARGRRQVQLVQPARGVHLVEG
EQGIARGRVERVGDRCREIVQGRLEALEVGGDVRLLEREIAAAVVQAVDQVAGGADEVRRRHRLQLEGVQVG
IERGLDLLVADPFAGGQAGTPAHLRPRFEHRDLPAVLLQFVGRAQACQARADDDRRRLFILAQRHRAEHPQH
EKRRGAQPP*
AnnotationID:7129GeneID:7129
AnnotatorUID: diggins
Modification Date/Time: 2005-03-25 09:09:24
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16853
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31329
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50131How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6286050Stop: 6284509
Length: 1542
Start Codon: TTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCGCTGCGAACCGGGAAGCGCAAGGCGCCGGAGCTTCCGGCGCCGGCGAAGGGAATCAATCGAACAGGCG
GGTGAACCAGGCGAACGGGTTCTTCTTCTCGCCGCCGGTCGTCGGTGCGGCTACCTTCTCGGCCTTCGCCAC
CATCGGCGCGCCCTCGATCACCGGCGTCTTGCCGGCGTACAGGTCGCGCACCTGGCTGGCGGCGCGCTTGCC
GCTGCGCAGCGCCCCCTCGATGGTGCCGGGGTACAGCGCATCGGTGTGCTCGCCGGCGAAGGCGACCCGCGA
CAGCGGCTGTTCCCAGATCCGCCAGAAGCGCGTCACCTGGCCCGGACCGTAGGCCAGGTAGGAACCGCCGGT
GCCCGGGTCGGCGCTGTAGCGACGAATTTCGTAGCCGCCGAAGGCACCGCGCATCTTCGGATAGAACTTGTT
CATGCGGATCAGCACCTGGTCGACCATCTGCCGGTCGCCGAAAGCCTGCAGCACGCGGGCGTTGTCGCCGGA
CAGGTTGATCAGCACGTTGGCGCCGCCTTTCAGCGCCGGCTCGACCCAGATCATGCCCAGGCCCTGGTCGCT
GAAGATCTCGCCGGAGAGGCGCGACTTGTCGTCCCACACCGGACGCTTGAACTTCAGCAGGATCTGGTCGCG
CCAGCCATAGTTGGTGCCCTTCAGCGCGGACATCTGGGTACCGCTCAGGGACGGGGTCATCTGGATCTGGCC
GAGCGCCTTCAGCGGCACGGCGAGAACCACGTAGTCGGCCTTGTAGGTCTCGCTGCCGGCCTTGACGGCGAC
GCCGTCCTTGGCCTGGACGATGCTCGACACCTTGGATTTGGTCTTGATCGTCTTGATCTGCTTGACGAAGGC
TTCCGCCAGCACCTGGCTGCCGCCGGGCAGGCGCGCCGCGCGCAGGTCGCGGTCGTCGACGCCACGGTAGGC
GCGGCCCTGCTGGGCGAGGTAGAGCAGCGACAGGCGCGACGGTTCGTCGTAGCGCGAACGGATACGCTGGTT
GACCAGCAGGCGCGCGGTCGGCGACAGGTTCAGCTTGTCCAGCCAGCGCGCGGCGTTCATCTGGTCGAGGGC
GAACAGGGTATTGCTCGAGGCAGGGTTGAGCGGGTCGGAGATCGATGCAGAGAGATCGTCCAGGGTCGACTC
GAAGCGCTTGAGGTCGGCGGCGACGTTCGGCTGCTTGAGCGCGAGATCGCTGCTGCTGTAGTACAGGCCGTC
GATCAGGTAGCTGGGGGTGCGGACGAAGTCCGGCGCCGGCACCGGCTTCAGCTTGAAGGTGTCCAGGTAGGC
ATTGAGCGTGGGCTGGACCTTCTGGTTGCCGACCCATTCGCTGGTGGCCAGGCCGGAACGCCCGCCCACCTG
CGGCCGCGCTTCGAGCACCGTGACCTGCCAGCCGTCCTTCTGCAATTCGTAGGCCGCGCTCAGGCCTGCCAG
GCCCGCGCCGACGACGATCGCCGTAGGCTGTTTATCCTTGCCCAGCGCCACCGCGCTGAACACCCCCAACAT
GAGAAACGCCGCGGCGCGCAGCCACCTTAA