ViewGene

Locus Name:
GeneID:
Location:

GeneID:7128
TrivialName: PA14_05470
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_05470
PAO1 Ortholog Locus:
Sequence Length:1563
Protein Length:520
Start: 481608
Stop: 483170
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGAAGTCGCTGACCGCCACGCTGACCGCGTCGCGGGTGGCGATGTCGATGCCTTCGCTGGCCACCTCGGC
GAGGAAGTCGATCTGCTCCGGGGTAATCACGTAGGGCGGCAGGAAATACACCACGCTGCCCAGCGGGCGCAG
CAGCGCGCCGCGCTCCAGGCCATGCTGGAAGACCTTCAGGCCGCGGCGCTCCTGCCAGGGGTAGGGCGTCCT
GGACGCCTTGTCCTGGACCATTTCGATGGCCAGGACCATCCCGGTCTGGCGCACCTCGGCGACATGCGGGTG
GTCGGCCAGGTGCGCGGTGGCCCTGGCCATGTGGGTGGACAGCGCGCGGTTGGCCTCGATCACCTTGTCTTC
CTCGAAGATGTCCAGGGTCGCCAGGGCGGCGGCGCAGGCCAGCGGGTTGCCGGTATAGGTGTGCGAGTGGAG
GAAGGCGCGCAGGGTCTGGTAGTCATCGTAGAAGCCCCGGTAGATGGTCTCGCTGGTCAGCACCGCGGACAT
CGGCAGGTAGCCGCCGGTGAGGGCCTTGGACAGGCAGAGGAAATCCGGGGCGATGCCGGCCTGCTCGCAggC
GAACATCGTCCCGGTGCGGCCGAAGCCCACCGCGATCTCGTCGTGGATCAGGTGCACGCCATAGCGGTCGCA
GGCTTCGCGCAGCAGCTTGAGGTAGACCGGATGGTACATGCGCATGCCGCCGGCGCCCTGGATCAGCGGTTC
GATGATGACCGCGGCGATCTCGTCGTGCCCTTCGGCCAGGGTGCGCTCCATGTGGGCGAACATGTTCCGCGA
ATGTTCTTCCCAGCACATGCCGTCCGGACGCAGGAAGCAGTCCGGGCTGGGCACCTTGATGGTGTCCAGCAG
CAGCGACTTGTAGGTTTCGGTGAACAGCGCCACGTCGCCCACCGACATCGCCGCGATGGTTTCGCCGTGGTA
GCTGTTGGTCAGGGTGACGAAGCGCTTCTTGCGCGGCCTGCCGCTATTGAGCCAGAAGTGGTAGCTCATCTT
CAGCGCGACCTCGATGCCCGCCGAGCCGCTGTCGGCGTAGAACACCCGGTCGAGCCCCGGCGGGGTGATCTT
CACCAGTCGCTCCGACAGCTCGATCACCGGCTGGTGGCTGAATCCGGCGAGGATCACGTGCTCCAACTGGTC
GACCTGGTCCTTGATGCGCTGGTTGATGCGCGGGTTGGCGTGGCCGAACACATTGACCCACCAGGAACTGAC
CGCGTCGATGTAGCGCTTGCCTTCGAAATCCTCCAGCCAGACGCCTTCGCCGCGGCGGATCGGGATCACCGG
CAGGCGTTCGTGGTCTTTCATCTGGGTACAGGGATGCCAGAGTACGTTCAGGTCGCGCTGCATCCAGTCGGC
GTTAAGGCCCATGGGCTGTCTCCTCGGATCGATCGGCAAAGCCTATGCAATGGGGGTGAGATGAACAACCCG
GTGGGTTGGGACACATCCGACAGCAGCCGCCGACGGACTCCTATGGTGGCCCAAACGGCTCTGGCGTATGCT
GCGCGCCGTTGCGTCTTTGCTTTTTTCCTGGGGAGTCCGGTATGTCGTTAA
Translation:
MEVADRHADRVAGGDVDAFAGHLGEEVDLLRGNHVGRQEIHHAAQRAQQRAALQAMLEDLQAAALLPGVGRP
GRLVLDHFDGQDHPGLAHLGDMRVVGQVRGGPGHVGGQRAVGLDHLVFLEDVQGRQGGGAGQRVAGIGVRVE
EGAQGLVVIVEAPVDGLAGQHRGHRQVAAGEGLGQAEEIRGDAGLLAGEHRPGAAEAHRDLVVDQVHAIAVA
GFAQQLEVDRMVHAHAAGALDQRFDDDRGDLVVPFGQGALHVGEHVPRMFFPAHAVRTQEAVRAGHLDGVQQ
QRLVGFGEQRHVAHRHRRDGFAVVAVGQGDEALLARPAAIEPEVVAHLQRDLDARRAAVGVEHPVEPRRGDL
HQSLRQLDHRLVAESGEDHVLQLVDLVLDALVDARVGVAEHIDPPGTDRVDVALAFEILQPDAFAAADRDHR
QAFVVFHLGTGMPEYVQVALHPVGVKAHGLSPRIDRQSLCNGGEMNNPVGWDTSDSSRRRTPMVAQTALAYA
ARRCVFAFFLGSPVCR*
AnnotationID:7128GeneID:7128
AnnotatorUID: diggins
Modification Date/Time: 2005-03-25 08:08:00
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16852
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31327
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50130How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6282950Stop: 6284512
Length: 1563
Start Codon: GTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGAAGTCGCTGACCGCCACGCTGACCGCGTCGCGGGTGGCGATGTCGATGCCTTCGCTGGCCACCTCGGC
GAGGAAGTCGATCTGCTCCGGGGTAATCACGTAGGGCGGCAGGAAATACACCACGCTGCCCAGCGGGCGCAG
CAGCGCGCCGCGCTCCAGGCCATGCTGGAAGACCTTCAGGCCGCGGCGCTCCTGCCAGGGGTAGGGCGTCCT
GGACGCCTTGTCCTGGACCATTTCGATGGCCAGGACCATCCCGGTCTGGCGCACCTCGGCGACATGCGGGTG
GTCGGCCAGGTGCGCGGTGGCCCTGGCCATGTGGGTGGACAGCGCGCGGTTGGCCTCGATCACCTTGTCTTC
CTCGAAGATGTCCAGGGTCGCCAGGGCGGCGGCGCAGGCCAGCGGGTTGCCGGTATAGGTGTGCGAGTGGAG
GAAGGCGCGCAGGGTCTGGTAGTCATCGTAGAAGCCCCGGTAGATGGTCTCGCTGGTCAGCACCGCGGACAT
CGGCAGGTAGCCGCCGGTGAGGGCCTTGGACAGGCAGAGGAAATCCGGGGCGATGCCGGCCTGCTCGCAggC
GAACATCGTCCCGGTGCGGCCGAAGCCCACCGCGATCTCGTCGTGGATCAGGTGCACGCCATAGCGGTCGCA
GGCTTCGCGCAGCAGCTTGAGGTAGACCGGATGGTACATGCGCATGCCGCCGGCGCCCTGGATCAGCGGTTC
GATGATGACCGCGGCGATCTCGTCGTGCCCTTCGGCCAGGGTGCGCTCCATGTGGGCGAACATGTTCCGCGA
ATGTTCTTCCCAGCACATGCCGTCCGGACGCAGGAAGCAGTCCGGGCTGGGCACCTTGATGGTGTCCAGCAG
CAGCGACTTGTAGGTTTCGGTGAACAGCGCCACGTCGCCCACCGACATCGCCGCGATGGTTTCGCCGTGGTA
GCTGTTGGTCAGGGTGACGAAGCGCTTCTTGCGCGGCCTGCCGCTATTGAGCCAGAAGTGGTAGCTCATCTT
CAGCGCGACCTCGATGCCCGCCGAGCCGCTGTCGGCGTAGAACACCCGGTCGAGCCCCGGCGGGGTGATCTT
CACCAGTCGCTCCGACAGCTCGATCACCGGCTGGTGGCTGAATCCGGCGAGGATCACGTGCTCCAACTGGTC
GACCTGGTCCTTGATGCGCTGGTTGATGCGCGGGTTGGCGTGGCCGAACACATTGACCCACCAGGAACTGAC
CGCGTCGATGTAGCGCTTGCCTTCGAAATCCTCCAGCCAGACGCCTTCGCCGCGGCGGATCGGGATCACCGG
CAGGCGTTCGTGGTCTTTCATCTGGGTACAGGGATGCCAGAGTACGTTCAGGTCGCGCTGCATCCAGTCGGC
GTTAAGGCCCATGGGCTGTCTCCTCGGATCGATCGGCAAAGCCTATGCAATGGGGGTGAGATGAACAACCCG
GTGGGTTGGGACACATCCGACAGCAGCCGCCGACGGACTCCTATGGTGGCCCAAACGGCTCTGGCGTATGCT
GCGCGCCGTTGCGTCTTTGCTTTTTTCCTGGGGAGTCCGGTATGTCGTTAA