ViewGene

Locus Name:
GeneID:
Location:

GeneID:7126
TrivialName: PA14_05350
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_05350
PAO1 Ortholog Locus:
Sequence Length:1968
Protein Length:655
Start: 467757
Stop: 465790
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGCCGGCCGACGATGCCTGCTGACGGGCGGCGTTGGAGATGTTCTGGATCAGTGCCGCGAGGGTCTTGGA
TACCTTCTCGATCTCCTCCAGGGCCACACCGGCGTCCTGGGCCAGGCGCGCGCCGCGGACCACCTCGGAGGT
GGTCTGCTCCATCGAGATCACCGCTTCGTTGGTGTCGGTCTGGATGGTCTTCACCAGCGCCTCGATCTGCTT
GGTCGCCGCCGAGGAACGTTCCGCCAGTCGCTGTACCTCGTCCGCTACCACGGCGAAGCCGCGGCCCGCGTC
CCCGGCCATCGACGCCTGGATCGCGGCGTTCAGGGCGAGGATGTTGGTCTGGTCGGCGATGTCGTTGATCAG
GCTGACGATGTCGCCGATCTCCTGGGACGACTCGCCGAGGCGCTTGATTCGCTTCGAGGTGTCCTGGATCTG
CTCGCGAATGTTGTCCATGCCGGTGATGGTGTTGTGCACCACCTCGTTGCCCTTGTTGGCGATGGCTACCGA
ACGTTCCGCTACCGCCGAGGATTCCGAGGCGTTCGCCGATACCTGGTCGATCGACACCGCCATTTCGTTGAT
CGCCGCCGAGGCGCCGGCGATTTCCTGCGCCTGGTGCTCGGAGGCTTCGGCCAGGTGCATCGCGGTGGACTG
GGTTTCCTGGGCCGCTGCGGCCACCTGCACGGCGGTCTGGTTGATGGTCTCCACCAGTTCGCGGAGCTGGTC
GATGGAGTAGTTGATCGAGTCGGCGATGGCGCCGGTGAAGTCCTCGGTCACGGTCGCGGCCACGGTCAGGTC
GCCGTCCGCGAGGTCGGCGATCTCGTCGAGCAGACGCAGGATCGCGGCCTGGTTGCGGTCGTTCTTCTCGGC
GGTCTCGGCCAGCCGGCGGTTGGTCTCGCGCACCATCACCAGGCCGATCAGGATGATCGAGGCCAGGGCCAG
GGCGCCGAGGACGTAACCGGCGAACAGGTTGATGCTACGCCCGCCGGCCAGGTTCTCGAAGCCGTCGGCCAG
TTGCGAGGCCTTGTCCAGCAGGGTTTGCGAAACGCTGAAGATGTTGTTCGCCGCTTCCCGGACCTGGAACAG
GTCGGGCGAGGTCTCGAGGATCTCGTCCACCGAGCCGGAGACGAACTCGAAGAGTTCGGCGATCTCGTTCAG
GCGATCCACCGCCTCGGCGTTGGTCACCTTGGAGATGCTCATCGCCGCGTTGCCTTCCTGCATGCCCTTCAG
TACGCGGCCGAACAGGCTGGCGTCGCGGCCGAAGCTGTCGGCGGCCTGCACCGAGTTCTCGTCGCCGGCCAG
CACCTTGTTCACCGAGCCGAGGATACGTTCGGCGAGCAGCGACTGGCGCTGGGCGACCGCGACCTGGTCGGC
CGGGGCACCGTTCTCCAGCAGGATGTCGACCACCTCTTCGTATTCCACCTGCAGCTGCGGGATGGTTTCGGC
GAGGGTCGAGGCCACCTGGTGCAGGGACAGTACGGTCTGTTCGCTGGCGAGGATGGAGTCGGCGTTCTTGCG
CAGACCGTCCCAGTCCTGCTGCACCACGTCCATCTGCGGCTTCACCGCTTCGGGGCTGGGCGGCAGGGATGT
GCTCTCGTCGCCGTTGACCAAGATGTTCCAGCGTTTCTCGAAGTCGTTGCGCGCATCCTTCAGGAGCTTGAA
CGCCTCGCCCTTGCCCGCCGCCGCTTCGGTGGCGTTCTTCGCGATCCGCTGCGACAGGACGCGCAGTTCGCC
GGCATGGCCGATGTACTGCTTGTCATGGTTCGACTGGGTGTTGAGGTAGGCAAAGTTGGCGAACAGCAACAC
GATCGAGACGATGAGGACGATGAACAGCCCCGCGATCACCGAGCTGCTGCGCATGCCCGCGAAAAGATTGCC
TGCGTTGATTTTCTTCATATTTGGCCCCCGCCCGGACCGACCACGATTACGATTTCCATGTCACGACACGGG
CCGGCAGACCGGCCCAACCGGTGA
Translation:
MAGRRCLLTGGVGDVLDQCREGLGYLLDLLQGHTGVLGQARAADHLGGGLLHRDHRFVGVGLDGLHQRLDLL
GRRRGTFRQSLYLVRYHGEAAARVPGHRRLDRGVQGEDVGLVGDVVDQADDVADLLGRLAEALDSLRGVLDL
LANVVHAGDGVVHHLVALVGDGYRTFRYRRGFRGVRRYLVDRHRHFVDRRRGAGDFLRLVLGGFGQVHRGGL
GFLGRCGHLHGGLVDGLHQFAELVDGVVDRVGDGAGEVLGHGRGHGQVAVREVGDLVEQTQDRGLVAVVLLG
GLGQPAVGLAHHHQADQDDRGQGQGAEDVTGEQVDATPAGQVLEAVGQLRGLVQQGLRNAEDVVRRFPDLEQ
VGRGLEDLVHRAGDELEEFGDLVQAIHRLGVGHLGDAHRRVAFLHALQYAAEQAGVAAEAVGGLHRVLVAGQ
HLVHRAEDTFGEQRLALGDRDLVGRGTVLQQDVDHLFVFHLQLRDGFGEGRGHLVQGQYGLFAGEDGVGVLA
QTVPVLLHHVHLRLHRFGAGRQGCALVAVDQDVPAFLEVVARILQELERLALARRRFGGVLRDPLRQDAQFA
GMADVLLVMVRLGVEVGKVGEQQHDRDDEDDEQPRDHRAAAHAREKIACVDFLHIWPPPGPTTITISMSRHG
PADRPNR*
AnnotationID:7126GeneID:7126
AnnotatorUID: diggins
Modification Date/Time: 2005-03-25 08:08:59
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16851
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31324
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50128How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6269099Stop: 6267132
Length: 1968
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGCCGGCCGACGATGCCTGCTGACGGGCGGCGTTGGAGATGTTCTGGATCAGTGCCGCGAGGGTCTTGGA
TACCTTCTCGATCTCCTCCAGGGCCACACCGGCGTCCTGGGCCAGGCGCGCGCCGCGGACCACCTCGGAGGT
GGTCTGCTCCATCGAGATCACCGCTTCGTTGGTGTCGGTCTGGATGGTCTTCACCAGCGCCTCGATCTGCTT
GGTCGCCGCCGAGGAACGTTCCGCCAGTCGCTGTACCTCGTCCGCTACCACGGCGAAGCCGCGGCCCGCGTC
CCCGGCCATCGACGCCTGGATCGCGGCGTTCAGGGCGAGGATGTTGGTCTGGTCGGCGATGTCGTTGATCAG
GCTGACGATGTCGCCGATCTCCTGGGACGACTCGCCGAGGCGCTTGATTCGCTTCGAGGTGTCCTGGATCTG
CTCGCGAATGTTGTCCATGCCGGTGATGGTGTTGTGCACCACCTCGTTGCCCTTGTTGGCGATGGCTACCGA
ACGTTCCGCTACCGCCGAGGATTCCGAGGCGTTCGCCGATACCTGGTCGATCGACACCGCCATTTCGTTGAT
CGCCGCCGAGGCGCCGGCGATTTCCTGCGCCTGGTGCTCGGAGGCTTCGGCCAGGTGCATCGCGGTGGACTG
GGTTTCCTGGGCCGCTGCGGCCACCTGCACGGCGGTCTGGTTGATGGTCTCCACCAGTTCGCGGAGCTGGTC
GATGGAGTAGTTGATCGAGTCGGCGATGGCGCCGGTGAAGTCCTCGGTCACGGTCGCGGCCACGGTCAGGTC
GCCGTCCGCGAGGTCGGCGATCTCGTCGAGCAGACGCAGGATCGCGGCCTGGTTGCGGTCGTTCTTCTCGGC
GGTCTCGGCCAGCCGGCGGTTGGTCTCGCGCACCATCACCAGGCCGATCAGGATGATCGAGGCCAGGGCCAG
GGCGCCGAGGACGTAACCGGCGAACAGGTTGATGCTACGCCCGCCGGCCAGGTTCTCGAAGCCGTCGGCCAG
TTGCGAGGCCTTGTCCAGCAGGGTTTGCGAAACGCTGAAGATGTTGTTCGCCGCTTCCCGGACCTGGAACAG
GTCGGGCGAGGTCTCGAGGATCTCGTCCACCGAGCCGGAGACGAACTCGAAGAGTTCGGCGATCTCGTTCAG
GCGATCCACCGCCTCGGCGTTGGTCACCTTGGAGATGCTCATCGCCGCGTTGCCTTCCTGCATGCCCTTCAG
TACGCGGCCGAACAGGCTGGCGTCGCGGCCGAAGCTGTCGGCGGCCTGCACCGAGTTCTCGTCGCCGGCCAG
CACCTTGTTCACCGAGCCGAGGATACGTTCGGCGAGCAGCGACTGGCGCTGGGCGACCGCGACCTGGTCGGC
CGGGGCACCGTTCTCCAGCAGGATGTCGACCACCTCTTCGTATTCCACCTGCAGCTGCGGGATGGTTTCGGC
GAGGGTCGAGGCCACCTGGTGCAGGGACAGTACGGTCTGTTCGCTGGCGAGGATGGAGTCGGCGTTCTTGCG
CAGACCGTCCCAGTCCTGCTGCACCACGTCCATCTGCGGCTTCACCGCTTCGGGGCTGGGCGGCAGGGATGT
GCTCTCGTCGCCGTTGACCAAGATGTTCCAGCGTTTCTCGAAGTCGTTGCGCGCATCCTTCAGGAGCTTGAA
CGCCTCGCCCTTGCCCGCCGCCGCTTCGGTGGCGTTCTTCGCGATCCGCTGCGACAGGACGCGCAGTTCGCC
GGCATGGCCGATGTACTGCTTGTCATGGTTCGACTGGGTGTTGAGGTAGGCAAAGTTGGCGAACAGCAACAC
GATCGAGACGATGAGGACGATGAACAGCCCCGCGATCACCGAGCTGCTGCGCATGCCCGCGAAAAGATTGCC
TGCGTTGATTTTCTTCATATTTGGCCCCCGCCCGGACCGACCACGATTACGATTTCCATGTCACGACACGGG
CCGGCAGACCGGCCCAACCGGTGA