ViewGene

Locus Name:
GeneID:
Location:

GeneID:7125
TrivialName: PA14_05240
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_05240
PAO1 Ortholog Locus:
Sequence Length:1404
Protein Length:467
Start: 458112
Stop: 459515
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK25017.1| (AE005968) hypothetical protein [Caulobacter crescentus CB15]
Identities = 117/388 (30%), Positives = 144/388 (37%), Gaps = 68/388 (17%)
Sequence:
ATGAGAAAGCCCGCCGGATGGCGGGCTTTTTCGTGGTGGCAGGGATCAGCCCTCGTGGGTCAGGTGTCCGTC
CACCAGGGTGTAACGCACTCGTCCCGGCAGGCAGTGACCGACGAACGGGCTGTTCTGCCCCTTCGAGTACCA
GCTCTCACCGGCCAGGGTCGAACCCTGCGGGTCGAACAGCACCAGGTCGGCGGCCTGGCCCACCGCCAGGCG
CCCGGCAGGCAGGCGCAGCGCCTGGGCCGGGCCGTGGGAGAGGCGGGCGAGCAGGGTCGGCAGGTCGAGCAG
GCCGTCCTGCACCAGCGTCATCGCCAGCGGCAGCAGCAGCTCGGCGCCGCTGATGCCCGGCTCGGTGGCGGC
GAACGGCGCGTTCTTGGCGTCCGCCTCGTGGGGTTGGTGGTGGCTGGCGATGGCTTGTACCACGCCGTTCTT
CACCGCCTCGCGCAGGGCTTCGCGGTCGGCCTTGGTGCGCAGCGGCGGTTGCACGTGGTAGAGGCTGGAGAA
GCCCACCAGCGCTTCGTCGGTGAGGATCAACTGGTACAGCGCCACGTCGCAGGTCACCGGCAGGCCGCGGGC
CTGGGCCTGGGCGACAAGTTCGATGCCGCGGGCGCTGGTCAACTGGCTGAAGTGCGCGCGCACGCCGCTCTG
TTCCACCAGCAGCAGGTTGCGGGCCAGGGCCACGGTCTCGGCGGTTTCCGGGATCCCCGCGAGGCCGAGGAA
GCTGGCAGTCGGGCCTTCGTGGGCGAGGCCGCCTTCGGCGAGATCGGTGTCCTGCGAGGTGAAGATCACCGT
CAGGTCGAAGGTCGCCGCGTACTCCAGGGCGCGCCGCAGGATGCGGTTGCTGGCGAAGCCATGCAGGCCATT
GGTGAAGGCCACGCAACCGGTGTCGCGCAGGGCCACCAGTTCCGACAGTTGCTCGCCGCCGAAGCCGCGGGT
CAGCGCGCCGATGGGGTAGACCTTGGCGTTGCCGGCCTCACGGGCCCGGTCGAGGATCAGCTCGGCCACCGC
CGGGGTGTCCAGCACCGGCCGGGTATAGGGCGGGCAGCACAGGCTGGTGGTGCCGCCGGCCGCGGCGGCGCG
GGTCTCGCTTTCGACGTTGCCCTTGCGTCCGTAGCCCGGCTCGCGCAGGGCGACGCTGAGGTCGACCAGTCC
CGGCGCGGCCACCAGGCCGGCGCCGTCGAGGGTCTTCTGGGCGCTGAAGCCGGCCGGCGCGGCGCCGATGGC
GACGATCTTGCCGGCCTCGATGTGGAGGTCGCCGACCTGGTCCAGGCCGCTGGCCGGGTCGATGACGCGGGC
GCCTCGGATACTGATGGTCATTCGGCGTCCTCCTGTTCCAGCTGGCGTTGGGTGTTCTGGCCGCTCATGGCC
ATGGACAGCACCGCCATGCGGATGGCGATGCCGTAG
Translation:
MRKPAGWRAFSWWQGSALVGQVSVHQGVTHSSRQAVTDERAVLPLRVPALTGQGRTLRVEQHQVGGLAHRQA
PGRQAQRLGRAVGEAGEQGRQVEQAVLHQRHRQRQQQLGAADARLGGGERRVLGVRLVGLVVAGDGLYHAVL
HRLAQGFAVGLGAQRRLHVVEAGEAHQRFVGEDQLVQRHVAGHRQAAGLGLGDKFDAAGAGQLAEVRAHAAL
FHQQQVAGQGHGLGGFRDPREAEEAGSRAFVGEAAFGEIGVLRGEDHRQVEGRRVLQGAPQDAVAGEAMQAI
GEGHATGVAQGHQFRQLLAAEAAGQRADGVDLGVAGLTGPVEDQLGHRRGVQHRPGIGRAAQAGGAAGRGGA
GLAFDVALASVARLAQGDAEVDQSRRGHQAGAVEGLLGAEAGRRGADGDDLAGLDVEVADLVQAAGRVDDAG
ASDTDGHSASSCSSWRWVFWPLMAMDSTAMRMAMP*
AnnotationID:7125GeneID:7125
AnnotatorUID: danlee
Modification Date/Time: 2004-02-05 18:06:10
Gene Name:
Confidence Code:4
GeneProduct:hypothetical
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:13904
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31322
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50127How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6259454Stop: 6260857
Length: 1404
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGAGAAAGCCCGCCGGATGGCGGGCTTTTTCGTGGTGGCAGGGATCAGCCCTCGTGGGTCAGGTGTCCGTC
CACCAGGGTGTAACGCACTCGTCCCGGCAGGCAGTGACCGACGAACGGGCTGTTCTGCCCCTTCGAGTACCA
GCTCTCACCGGCCAGGGTCGAACCCTGCGGGTCGAACAGCACCAGGTCGGCGGCCTGGCCCACCGCCAGGCG
CCCGGCAGGCAGGCGCAGCGCCTGGGCCGGGCCGTGGGAGAGGCGGGCGAGCAGGGTCGGCAGGTCGAGCAG
GCCGTCCTGCACCAGCGTCATCGCCAGCGGCAGCAGCAGCTCGGCGCCGCTGATGCCCGGCTCGGTGGCGGC
GAACGGCGCGTTCTTGGCGTCCGCCTCGTGGGGTTGGTGGTGGCTGGCGATGGCTTGTACCACGCCGTTCTT
CACCGCCTCGCGCAGGGCTTCGCGGTCGGCCTTGGTGCGCAGCGGCGGTTGCACGTGGTAGAGGCTGGAGAA
GCCCACCAGCGCTTCGTCGGTGAGGATCAACTGGTACAGCGCCACGTCGCAGGTCACCGGCAGGCCGCGGGC
CTGGGCCTGGGCGACAAGTTCGATGCCGCGGGCGCTGGTCAACTGGCTGAAGTGCGCGCGCACGCCGCTCTG
TTCCACCAGCAGCAGGTTGCGGGCCAGGGCCACGGTCTCGGCGGTTTCCGGGATCCCCGCGAGGCCGAGGAA
GCTGGCAGTCGGGCCTTCGTGGGCGAGGCCGCCTTCGGCGAGATCGGTGTCCTGCGAGGTGAAGATCACCGT
CAGGTCGAAGGTCGCCGCGTACTCCAGGGCGCGCCGCAGGATGCGGTTGCTGGCGAAGCCATGCAGGCCATT
GGTGAAGGCCACGCAACCGGTGTCGCGCAGGGCCACCAGTTCCGACAGTTGCTCGCCGCCGAAGCCGCGGGT
CAGCGCGCCGATGGGGTAGACCTTGGCGTTGCCGGCCTCACGGGCCCGGTCGAGGATCAGCTCGGCCACCGC
CGGGGTGTCCAGCACCGGCCGGGTATAGGGCGGGCAGCACAGGCTGGTGGTGCCGCCGGCCGCGGCGGCGCG
GGTCTCGCTTTCGACGTTGCCCTTGCGTCCGTAGCCCGGCTCGCGCAGGGCGACGCTGAGGTCGACCAGTCC
CGGCGCGGCCACCAGGCCGGCGCCGTCGAGGGTCTTCTGGGCGCTGAAGCCGGCCGGCGCGGCGCCGATGGC
GACGATCTTGCCGGCCTCGATGTGGAGGTCGCCGACCTGGTCCAGGCCGCTGGCCGGGTCGATGACGCGGGC
GCCTCGGATACTGATGGTCATTCGGCGTCCTCCTGTTCCAGCTGGCGTTGGGTGTTCTGGCCGCTCATGGCC
ATGGACAGCACCGCCATGCGGATGGCGATGCCGTAG