ViewGene

Locus Name:
GeneID:
Location:

GeneID: 7119

TrivialName: PA14_04990

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_04990

PAO1 Ortholog Locus:

Sequence Length: 2151

Protein Length: 716

Start: 441409

Stop: 439259

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK25017.1| (AE005968) hypothetical protein [Caulobacter crescentus CB15] Identities = 108/400 (27%), Positives = 152/400 (38%), Gaps = 85/400 (21%)

Sequence:

ATGGACCTCCTGGGCCCGGGTCAGCACGCCATCCTTGTCGTAGATGTCGGCGGCGAGGATCTGCCAGCTGTC
TTCGTCGAGGTAGAAGCGGCGCTTGGCGTAGGGATGGCTGAAGCCCTTGCGCAGGGTCGCCTCGACCACCCA
GACGCGATGCAGCTCGTAGCGCAGCAGGTCGGGATTGATGAAGCGGCTCTTGAGGATGTCGCCATAGGCGAG
GCCCTTCTGGTGCACCGCGTAGCTGTTGTAAGGCACCAGCATCTCGCGCTTGCCGAGCAACGCCCACTCGTA
GTGGTCCGGTGCGCCGTTGTAGACATCCACGGTGTCCGCCGTGGCCATGCCGTTGGTATCCGGCTGCAGGCT
GTCGTAGGCCAGGGTCGGCAAGCGCCGCACGCGCCGCTCGCCACGGTTGAAGCGCCAGGCCTTGCGGATCGA
CAGCACCTGGTCGAGGGTTTCCTGCACCACCAGCGCCGAACCGGCCAGGCGCGCCGGCGCGACCACCTTGTA
CTTGTAGTAGAACAACGTGTTGTCGAGGTTCTCCGGGATCATCCCCTCGCGGCCATAGACGAAGTACAGGTA
GCGGTCGAGCTTGAGCAGGTTGTAGCTGCCGTTGGCCAGCACCGCCGCCTGGTTGGTCTGCAGGTGCAGTTG
CTCGCCGCGGTAGCGCATGATGTGGTTCCAGATCGCTTCCTGGCCGCTCTGCGGCAGGGGGAAGGGCACACC
GGCGGCAGCGCCTTGCACGCCGTTGCCGTCGGCGATCAGCTCGGCGCGGCTGGCGTTGGCGCGGGTAGCGTC
GTACAGGCGCTGCGGCAGGGATGCGCTGCGGCGGGAGGGGAAGACCCGCAGGTGGTAGTCCGGGTTGGCCTG
CAGCAAGGCCTGGGTGCCCGGCGTCAGCAGCGCCTGGTAGGCGGCCATGTTGCGGCTGTCGACGACCAGGCG
CGGACGATCGGCGGCGAACGGGTCGAGGTGATGCATGCCGGGCCGGTAGCCGGCCGGCGCCTGGGTGATGCC
GCCGGTCCAGGGCGGGATGCTGCCATCGGCGTTGCCGGCCCGCTCCGCTCCCAGCGGGGTCAGGTCCTGGTC
CAGGCGTGCGGCCTGGACTTCGTCTACCTTGGCCTGCGCCGCCCAGGCGCAACCGGCCCCGAGCAACAGGAT
GCCCAGTTTCTTCAACACAGCAGTCTCCTTTGCAGCCGGCCGAGCCGTGCCGCTCTTATTATTGGATCCGGC
CGAAGCCGGGAAACGTGCAGCTTGAAGGTGAGGTCCGCCGGGTGTTCCCGGTCTGCTTGGAGTCCCGGCGCC
GGTTCGGCGCCAGGGATACGTCGCTGGTGCGGTGGATCAGTCGATGCGCTCGAACTTGAGGTCCCAGACGCC
ATGTCCCAGGCGCTCCCCGCGCCGTTCGAACTTGGTCACCGGACGCTCTTGCGGGCGCGCTACGAAGCGGCC
GTCTTCGGCCTGGTTGCGGTAGCCCGGCGCCGCGCTCATGACGTCCAGCATGTGCTCGGCATAGGGCTCCCA
GTCGGTGGCCATGTGCAGCACGCCGCCGACCTTCAGCTTGCGCCGCACCAGTTCGGCGAATTCCGGCTGGAC
GATCCGCCGCTTGTGGTGGCGCTTCTTGTGCCAGGGATCGGGGAAGAACAGCAGCAGCCGATCGAGGCTGGC
GTCGGCCACGCAGTGGCGCAGCACTTCCAGCGCGTCGCAGCTATACACCCGCACGTTGCCCAGGCCCTGGGT
CAGCAGGCCGTTGAGCAGCGCGCCGACGCCCGGCTTGTGCACCTCGACGCCGATGAAGTCGATGTCAGGCGC
GGCGGCGGCCATTTCCAGGGTGGAATGGCCCATGCCGAAACCGATCTCGAAAGTCCGCGGCGCCTGGCGACC
GAAGATCGCGTCGAAGTCCTGAACCTCATCGCTCAGTTCCAGGCCGAACTTCGGCCAGCCCAGGTCGAGGCC
ACGCTGCTGGCCTTCGGTCATGCGCCCGGCGCGCATCACGAAGCTCTTCACGGTGCGCATCGGCCGTGCTTC
GTCGTGTTCCGCCAGGGAGCCCTGGGCCGGGGATTGCGGGGTATCGCTCATGGAAAAGAAAACCTTGCTAGA
GACAGAAGGGCGGGCTGCCTGCCGGACGCTTCCCGCATCCGGCGGACAGCCCGCCCCAGGTAG

Translation:

MDLLGPGQHAILVVDVGGEDLPAVFVEVEAALGVGMAEALAQGRLDHPDAMQLVAQQVGIDEAALEDVAIGE
ALLVHRVAVVRHQHLALAEQRPLVVVRCAVVDIHGVRRGHAVGIRLQAVVGQGRQAPHAPLATVEAPGLADR
QHLVEGFLHHQRRTGQARRRDHLVLVVEQRVVEVLRDHPLAAIDEVQVAVELEQVVAAVGQHRRLVGLQVQL
LAAVAHDVVPDRFLAALRQGEGHTGGSALHAVAVGDQLGAAGVGAGSVVQALRQGCAAAGGEDPQVVVRVGL
QQGLGARRQQRLVGGHVAAVDDQARTIGGERVEVMHAGPVAGRRLGDAAGPGRDAAIGVAGPLRSQRGQVLV
QACGLDFVYLGLRRPGATGPEQQDAQFLQHSSLLCSRPSRAALIIGSGRSRETCSLKVRSAGCSRSAWSPGA
GSAPGIRRWCGGSVDALELEVPDAMSQALPAPFELGHRTLLRARYEAAVFGLVAVARRRAHDVQHVLGIGLP
VGGHVQHAADLQLAPHQFGEFRLDDPPLVVALLVPGIGEEQQQPIEAGVGHAVAQHFQRVAAIHPHVAQALG
QQAVEQRADARLVHLDADEVDVRRGGGHFQGGMAHAETDLESPRRLATEDRVEVLNLIAQFQAELRPAQVEA
TLLAFGHAPGAHHEALHGAHRPCFVVFRQGALGRGLRGIAHGKENLARDRRAGCLPDASRIRRTARPR*

AnnotationID:7119 GeneID:7119

AnnotatorUID: diggins

Modification Date/Time: 2004-08-08 22:10:08

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:13894

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:31310

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

ReferenceID:33707

Author/Investigator(s):

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: Misc (text/plain)

Data: 7119_cdd.html

URL:

GC ORFID: `50121`	How Found: `Glimmer`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name:	Glimmer Score:
Start: `6242751`	Stop: `6240601`
Length: `2151`
Start Codon: `ATG`	Truncated Start:
Stop Codon: `TAG`	Truncated Stop:
Homolog:	Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGACCTCCTGGGCCCGGGTCAGCACGCCATCCTTGTCGTAGATGTCGGCGGCGAGGATCTGCCAGCTGTC TTCGTCGAGGTAGAAGCGGCGCTTGGCGTAGGGATGGCTGAAGCCCTTGCGCAGGGTCGCCTCGACCACCCA GACGCGATGCAGCTCGTAGCGCAGCAGGTCGGGATTGATGAAGCGGCTCTTGAGGATGTCGCCATAGGCGAG GCCCTTCTGGTGCACCGCGTAGCTGTTGTAAGGCACCAGCATCTCGCGCTTGCCGAGCAACGCCCACTCGTA GTGGTCCGGTGCGCCGTTGTAGACATCCACGGTGTCCGCCGTGGCCATGCCGTTGGTATCCGGCTGCAGGCT GTCGTAGGCCAGGGTCGGCAAGCGCCGCACGCGCCGCTCGCCACGGTTGAAGCGCCAGGCCTTGCGGATCGA CAGCACCTGGTCGAGGGTTTCCTGCACCACCAGCGCCGAACCGGCCAGGCGCGCCGGCGCGACCACCTTGTA CTTGTAGTAGAACAACGTGTTGTCGAGGTTCTCCGGGATCATCCCCTCGCGGCCATAGACGAAGTACAGGTA GCGGTCGAGCTTGAGCAGGTTGTAGCTGCCGTTGGCCAGCACCGCCGCCTGGTTGGTCTGCAGGTGCAGTTG CTCGCCGCGGTAGCGCATGATGTGGTTCCAGATCGCTTCCTGGCCGCTCTGCGGCAGGGGGAAGGGCACACC GGCGGCAGCGCCTTGCACGCCGTTGCCGTCGGCGATCAGCTCGGCGCGGCTGGCGTTGGCGCGGGTAGCGTC GTACAGGCGCTGCGGCAGGGATGCGCTGCGGCGGGAGGGGAAGACCCGCAGGTGGTAGTCCGGGTTGGCCTG CAGCAAGGCCTGGGTGCCCGGCGTCAGCAGCGCCTGGTAGGCGGCCATGTTGCGGCTGTCGACGACCAGGCG CGGACGATCGGCGGCGAACGGGTCGAGGTGATGCATGCCGGGCCGGTAGCCGGCCGGCGCCTGGGTGATGCC GCCGGTCCAGGGCGGGATGCTGCCATCGGCGTTGCCGGCCCGCTCCGCTCCCAGCGGGGTCAGGTCCTGGTC CAGGCGTGCGGCCTGGACTTCGTCTACCTTGGCCTGCGCCGCCCAGGCGCAACCGGCCCCGAGCAACAGGAT GCCCAGTTTCTTCAACACAGCAGTCTCCTTTGCAGCCGGCCGAGCCGTGCCGCTCTTATTATTGGATCCGGC CGAAGCCGGGAAACGTGCAGCTTGAAGGTGAGGTCCGCCGGGTGTTCCCGGTCTGCTTGGAGTCCCGGCGCC GGTTCGGCGCCAGGGATACGTCGCTGGTGCGGTGGATCAGTCGATGCGCTCGAACTTGAGGTCCCAGACGCC ATGTCCCAGGCGCTCCCCGCGCCGTTCGAACTTGGTCACCGGACGCTCTTGCGGGCGCGCTACGAAGCGGCC GTCTTCGGCCTGGTTGCGGTAGCCCGGCGCCGCGCTCATGACGTCCAGCATGTGCTCGGCATAGGGCTCCCA GTCGGTGGCCATGTGCAGCACGCCGCCGACCTTCAGCTTGCGCCGCACCAGTTCGGCGAATTCCGGCTGGAC GATCCGCCGCTTGTGGTGGCGCTTCTTGTGCCAGGGATCGGGGAAGAACAGCAGCAGCCGATCGAGGCTGGC GTCGGCCACGCAGTGGCGCAGCACTTCCAGCGCGTCGCAGCTATACACCCGCACGTTGCCCAGGCCCTGGGT CAGCAGGCCGTTGAGCAGCGCGCCGACGCCCGGCTTGTGCACCTCGACGCCGATGAAGTCGATGTCAGGCGC GGCGGCGGCCATTTCCAGGGTGGAATGGCCCATGCCGAAACCGATCTCGAAAGTCCGCGGCGCCTGGCGACC GAAGATCGCGTCGAAGTCCTGAACCTCATCGCTCAGTTCCAGGCCGAACTTCGGCCAGCCCAGGTCGAGGCC ACGCTGCTGGCCTTCGGTCATGCGCCCGGCGCGCATCACGAAGCTCTTCACGGTGCGCATCGGCCGTGCTTC GTCGTGTTCCGCCAGGGAGCCCTGGGCCGGGGATTGCGGGGTATCGCTCATGGAAAAGAAAACCTTGCTAGA GACAGAAGGGCGGGCTGCCTGCCGGACGCTTCCCGCATCCGGCGGACAGCCCGCCCCAGGTAG