ViewGene

Locus Name:
GeneID:
Location:

GeneID:7116
TrivialName: PA14_04800
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_04800
PAO1 Ortholog Locus:
Sequence Length:1350
Protein Length:449
Start: 425558
Stop: 424209
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK53449.1| (AY032926) unknown [Streptomyces aureofaciens]
Identities = 141/503 (28%), Positives = 170/503 (33%), Gaps = 100/503 (19%)
Sequence:
GTGGCTGAAGGCCCTGCGCGAGCTGCTGTTCAAGGAACAGCAGGCACTGATCGAGGCCATCGACCGGGACTT
CAGCGCGCGCTCCGCCGACGAGACCCTGCTCGCCGAGATCATGCCCAGCCTGCACGGCATCCACTACGCCGC
CAAGCGCGTGAAGAAATGGATGAAGCCCGCGCGCCGCGCGGTCGGCCTGCAATTCCAGCCGGCCTCGGCCCA
GGTGGTGTACCAGCCGCTGGGCGTGGTCGGGGTGATCGTGCCTTGGAACTATCCGCTGTTCCTCTCCATCGG
CCCGCTGACCGGGGCCCTCGCCGCCGGCAACCGGGTGATGATCAAGATGAGCGAGTCGACCCCGGCCACCGG
GCGCCTGCTCAAGGACCTGCTGGCGCGGATCTTCCCCGAGGACCAGGTCGCCGTGGTGCTAGGCGAGGTAGA
CGTCGGCGTGGCCTTTTCCAAGCTGCCGTTCGACCACCTGCTGTTCACCGGCGCCACCAGCGTCGGCAAGCA
CGTGATGCGCGCCGCCGCCGAGAACCTGACCCCGGTCACCCTGGAGCTGGGCGGCAAGTCGCCGGCGATCAT
CTCCGACAGCGTGCCGATGAAGGACGCCGCCGAGCGGATCGCCTTCGGCAAGAGCCTCAACGCCGGGCAGAC
CTGCGTCGCGCCCGACTACGTGCTGGTACCGAGCCGGCGCGTCGAGGAATTCGTCAGTCAGTACAAGGAGGT
GGTCCAGGGCTTCTTCCCGCGTCTTTCGGACAACCCCGACTACACCGCGATCATCAACGAGCGCCAGCTCGG
CCGCCTCCGGGGCTATCTCGACGACGCCCGCGAGAAGGGCGCGACCCTCGTCCCGCTGTTCGCCGAAGGCCA
GCAACGGCGCCTGCCGCAGACGCTGCTGCTGAACGTCAGCGACGACATGAAAGTGATGCAGGAGGAAATCTT
CGGCCCGCTGCTGCCGGTGATCCCCTACGAGCGCCTGGAAGACGCCCTGGCCTACGTCAACCAGCGCCCGCG
ACCGCTGGCCCTGTACTACTTCGGCTACGACAAGGCGCAGCAGCAGCGCGTGCTGCACGAGACCCACTCAGG
CGGTGTGTGTCTGAACGACACCCTGCTGCATGTCGCCCAGGACGACATCCCGTTCGGTGGCGTCGGTCCCTC
CGGCATGGGCCACTACCATGGCCACGAAGGCTTCCTCACCTTCAGCAAGGCCAAGGGCGTGTTCAGCAAGCC
GCGCTTCAACGCCGCGCGAATGATCTACCCGCCCTACGGCAAGTCGATCCAGAAGCTCGTCTACAAGCTGTT
CGTGCGCTGAACCGGGGCGCGTGCGGCGCCCCCTcATTCCTACGCTGCAGGTGA
Translation:
MAEGPARAAVQGTAGTDRGHRPGLQRALRRRDPARRDHAQPARHPLRRQAREEMDEARAPRGRPAIPAGLGP
GGVPAAGRGRGDRALELSAVPLHRPADRGPRRRQPGDDQDERVDPGHRAPAQGPAGADLPRGPGRRGARRGR
RRRGLFQAAVRPPAVHRRHQRRQARDARRRREPDPGHPGAGRQVAGDHLRQRADEGRRRADRLRQEPQRRAD
LRRARLRAGTEPARRGIRQSVQGGGPGLLPASFGQPRLHRDHQRAPARPPPGLSRRRPREGRDPRPAVRRRP
ATAPAADAAAERQRRHESDAGGNLRPAAAGDPLRAPGRRPGLRQPAPATAGPVLLRLRQGAAAARAARDPLR
RCVSERHPAACRPGRHPVRWRRSLRHGPLPWPRRLPHLQQGQGRVQQAALQRRANDLPALRQVDPEARLQAV
RALNRGACGAPSFLRCR*
AnnotationID:7116GeneID:7116
AnnotatorUID: diggins
Modification Date/Time: 2005-03-25 05:05:15
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:16842
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31304
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50118How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6226900Stop: 6225551
Length: 1350
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGCTGAAGGCCCTGCGCGAGCTGCTGTTCAAGGAACAGCAGGCACTGATCGAGGCCATCGACCGGGACTT
CAGCGCGCGCTCCGCCGACGAGACCCTGCTCGCCGAGATCATGCCCAGCCTGCACGGCATCCACTACGCCGC
CAAGCGCGTGAAGAAATGGATGAAGCCCGCGCGCCGCGCGGTCGGCCTGCAATTCCAGCCGGCCTCGGCCCA
GGTGGTGTACCAGCCGCTGGGCGTGGTCGGGGTGATCGTGCCTTGGAACTATCCGCTGTTCCTCTCCATCGG
CCCGCTGACCGGGGCCCTCGCCGCCGGCAACCGGGTGATGATCAAGATGAGCGAGTCGACCCCGGCCACCGG
GCGCCTGCTCAAGGACCTGCTGGCGCGGATCTTCCCCGAGGACCAGGTCGCCGTGGTGCTAGGCGAGGTAGA
CGTCGGCGTGGCCTTTTCCAAGCTGCCGTTCGACCACCTGCTGTTCACCGGCGCCACCAGCGTCGGCAAGCA
CGTGATGCGCGCCGCCGCCGAGAACCTGACCCCGGTCACCCTGGAGCTGGGCGGCAAGTCGCCGGCGATCAT
CTCCGACAGCGTGCCGATGAAGGACGCCGCCGAGCGGATCGCCTTCGGCAAGAGCCTCAACGCCGGGCAGAC
CTGCGTCGCGCCCGACTACGTGCTGGTACCGAGCCGGCGCGTCGAGGAATTCGTCAGTCAGTACAAGGAGGT
GGTCCAGGGCTTCTTCCCGCGTCTTTCGGACAACCCCGACTACACCGCGATCATCAACGAGCGCCAGCTCGG
CCGCCTCCGGGGCTATCTCGACGACGCCCGCGAGAAGGGCGCGACCCTCGTCCCGCTGTTCGCCGAAGGCCA
GCAACGGCGCCTGCCGCAGACGCTGCTGCTGAACGTCAGCGACGACATGAAAGTGATGCAGGAGGAAATCTT
CGGCCCGCTGCTGCCGGTGATCCCCTACGAGCGCCTGGAAGACGCCCTGGCCTACGTCAACCAGCGCCCGCG
ACCGCTGGCCCTGTACTACTTCGGCTACGACAAGGCGCAGCAGCAGCGCGTGCTGCACGAGACCCACTCAGG
CGGTGTGTGTCTGAACGACACCCTGCTGCATGTCGCCCAGGACGACATCCCGTTCGGTGGCGTCGGTCCCTC
CGGCATGGGCCACTACCATGGCCACGAAGGCTTCCTCACCTTCAGCAAGGCCAAGGGCGTGTTCAGCAAGCC
GCGCTTCAACGCCGCGCGAATGATCTACCCGCCCTACGGCAAGTCGATCCAGAAGCTCGTCTACAAGCTGTT
CGTGCGCTGAACCGGGGCGCGTGCGGCGCCCCCTcATTCCTACGCTGCAGGTGA