ViewGene

Locus Name:
GeneID:
Location:

GeneID:7114
TrivialName: PA14_04740
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_04740
PAO1 Ortholog Locus:
Sequence Length:1773
Protein Length:590
Start: 419141
Stop: 420913
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 161/575 (28%), Positives = 201/575 (34%), Gaps = 116/575 (20%)
Sequence:
GTGCGCCTGGGGCTGTGCCTGCATCTCCGGGGAAAACGCCGAATAACCGATCCCGCGCGGGTCGCTGGCGGC
GTCGACGCGGCCGCTGCGCTTGTCCCAGTAGAGCACCTGCTGGTTGCCGTAGCTGCGCTCCAGGCGTTTGAG
CTGATAGCCGCGCCGGCGCAGTTCGGCGGCCTCGGCATCGCTGAAGGCGCGCGGTTCGTACTCGACGACGTC
CGGCTTGTACTGGTGGTGGTAGCGCGGCGCGGCGACCCATTGGCCGACCGGGCGGCCGTCGAAGTACTGCAG
CATGGAGATCAGCACCATGCTCGGGATACGGCTGCCGCCAGGGGTGCCGAAGGCGGCGAAGTCGGTCGGGCT
TTCCAGGAAGCTCGGGCTCATGCTCGACAGCGGGCGCTTGCCGGCCGCCACCGCGTTCGCCTGGCTGCCGGC
CAGGCCGTAGCTGTTGGCGCCCTGGGTGTCGGCGGCGAAATCGTCCATCTCGTTGTTCAGCACCACGCCGGT
ACCGGGAACGGTGAAGGCGGCGCCGAACGGCAGGTTCACCGAGAGGGTGGCGGCCACCGCGTTGCCCTGGGC
ATCGATCACCGCGAAGTGGGTGGTGTGGTCGCCTTCGCGCCAGGCCGGCGCTTCCGGCAGCGCCGAGCTGGG
CGTGGCGCGGCGCGGGTCGATGCCGGCGGCAAGGCGCTTCAGGTAGTCCGGCGCCAGCAAGCTGGGCAGCGG
GTTGGCGACGAAGTCCGGGTCGCCGAGCAGGCCTCGATCGCGGTAGGCACGGCGCAGGACCTCCAGCACGTA
ATGGGCGCGCTGTACCGGCTCGGCCTTCTGCCACGGCAGCTGTTCCAGCATCTGCAGGCTCTGCGCCAGGGC
CACGCCGCCGGCCGAGGGCGGCGGTGCGCTGATCAGTTCGCGGCCGTTGGCCAGCTTCACCTCCAGCGGGCG
GCGTTCGATCACCCGGTAGTCGCGCAGGTCGGCCGCGCTCCAGATGCCGCCGCCGGCGCGGACCCCGGTGAG
CAGCTTGTCCGCTGTCTCGCCTTCGTAGAAGCCGATCCGCCCGTAGCGCCCGAGGCGTTCCAGGGTACGTGC
CAACTGCGGTTGGCGGAGCAGGTTCCATTCGTCGGGGATTCCGCCCTTGTCGAGGAAGATCCGCGCGGTTTC
CGGGTCCTTGCGCATCGCTTCCAGGCGCATGGCGACGCGGTCGCGGTAGACCCGGTCGACGGATACGCCATC
CACCGCCAGGCGGATCGCCGGCACCAGATTGTCGGCCAGGGGCTTGCGTCCGTAGCGGCCGCTCAATTCGAC
CAGCGCCGCCGGCAGGCCGGGGATCGCCGCCGCCAGCGGGCCGTCGACGGACAGCCTGGGGTCGACCTTGCC
GTTGCGCCGGTACATGTCGGCGTAGGCGGCCTTCGGCGCGCGCTCGCGGGCGTCGAGGAAGCGATAGGTCGG
CTGCGCGCCGGCCTGGCGCAGAAGGAAGAATCCACCGCCGCCGAGTCCCGAGCCGTAAGGCTCGGCTACCGC
CAGGGCAGCGGCGATGGCCGCCGCGGCGTCGAAGGCGTTGCCGCCATTGGCCAGGGTTTCCAGGCCGGCGAC
GGTCGCGGCCGGATGTGGCGTGGCGACGGCGGCCTGCTGCGGTGCGTGGGCGTCGCCGCGAAAGCTGTCGGC
ATGCGCCGCGAGGCTGAGCAGGGACAGGCCGCAGGCGGCGACCAGGGTACGGACGGGCAGGTTCAGGAAGGA
CATGGCGGCTCACTGTTCAGCGGCGTTCGCGGGACGGGACCGTGA
Translation:
MRLGLCLHLRGKRRITDPARVAGGVDAAAALVPVEHLLVAVAALQAFELIAAPAQFGGLGIAEGARFVLDDV
RLVLVVVARRGDPLADRAAVEVLQHGDQHHARDTAAARGAEGGEVGRAFQEARAHARQRALAGRHRVRLAAG
QAVAVGALGVGGEIVHLVVQHHAGTGNGEGGAERQVHREGGGHRVALGIDHREVGGVVAFAPGRRFRQRRAG
RGAARVDAGGKALQVVRRQQAGQRVGDEVRVAEQASIAVGTAQDLQHVMGALYRLGLLPRQLFQHLQALRQG
HAAGRGRRCADQFAAVGQLHLQRAAFDHPVVAQVGRAPDAAAGADPGEQLVRCLAFVEADPPVAPEAFQGTC
QLRLAEQVPFVGDSALVEEDPRGFRVLAHRFQAHGDAVAVDPVDGYAIHRQADRRHQIVGQGLASVAAAQFD
QRRRQAGDRRRQRAVDGQPGVDLAVAPVHVGVGGLRRALAGVEEAIGRLRAGLAQKEESTAAESRAVRLGYR
QGSGDGRRGVEGVAAIGQGFQAGDGRGRMWRGDGGLLRCVGVAAKAVGMRREAEQGQAAGGDQGTDGQVQEG
HGGSLFSGVRGTGP*
AnnotationID:7114GeneID:7114
AnnotatorUID: diggins
Modification Date/Time: 2005-03-24 18:06:42
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16840
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31300
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50116How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6220483Stop: 6222255
Length: 1773
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCGCCTGGGGCTGTGCCTGCATCTCCGGGGAAAACGCCGAATAACCGATCCCGCGCGGGTCGCTGGCGGC
GTCGACGCGGCCGCTGCGCTTGTCCCAGTAGAGCACCTGCTGGTTGCCGTAGCTGCGCTCCAGGCGTTTGAG
CTGATAGCCGCGCCGGCGCAGTTCGGCGGCCTCGGCATCGCTGAAGGCGCGCGGTTCGTACTCGACGACGTC
CGGCTTGTACTGGTGGTGGTAGCGCGGCGCGGCGACCCATTGGCCGACCGGGCGGCCGTCGAAGTACTGCAG
CATGGAGATCAGCACCATGCTCGGGATACGGCTGCCGCCAGGGGTGCCGAAGGCGGCGAAGTCGGTCGGGCT
TTCCAGGAAGCTCGGGCTCATGCTCGACAGCGGGCGCTTGCCGGCCGCCACCGCGTTCGCCTGGCTGCCGGC
CAGGCCGTAGCTGTTGGCGCCCTGGGTGTCGGCGGCGAAATCGTCCATCTCGTTGTTCAGCACCACGCCGGT
ACCGGGAACGGTGAAGGCGGCGCCGAACGGCAGGTTCACCGAGAGGGTGGCGGCCACCGCGTTGCCCTGGGC
ATCGATCACCGCGAAGTGGGTGGTGTGGTCGCCTTCGCGCCAGGCCGGCGCTTCCGGCAGCGCCGAGCTGGG
CGTGGCGCGGCGCGGGTCGATGCCGGCGGCAAGGCGCTTCAGGTAGTCCGGCGCCAGCAAGCTGGGCAGCGG
GTTGGCGACGAAGTCCGGGTCGCCGAGCAGGCCTCGATCGCGGTAGGCACGGCGCAGGACCTCCAGCACGTA
ATGGGCGCGCTGTACCGGCTCGGCCTTCTGCCACGGCAGCTGTTCCAGCATCTGCAGGCTCTGCGCCAGGGC
CACGCCGCCGGCCGAGGGCGGCGGTGCGCTGATCAGTTCGCGGCCGTTGGCCAGCTTCACCTCCAGCGGGCG
GCGTTCGATCACCCGGTAGTCGCGCAGGTCGGCCGCGCTCCAGATGCCGCCGCCGGCGCGGACCCCGGTGAG
CAGCTTGTCCGCTGTCTCGCCTTCGTAGAAGCCGATCCGCCCGTAGCGCCCGAGGCGTTCCAGGGTACGTGC
CAACTGCGGTTGGCGGAGCAGGTTCCATTCGTCGGGGATTCCGCCCTTGTCGAGGAAGATCCGCGCGGTTTC
CGGGTCCTTGCGCATCGCTTCCAGGCGCATGGCGACGCGGTCGCGGTAGACCCGGTCGACGGATACGCCATC
CACCGCCAGGCGGATCGCCGGCACCAGATTGTCGGCCAGGGGCTTGCGTCCGTAGCGGCCGCTCAATTCGAC
CAGCGCCGCCGGCAGGCCGGGGATCGCCGCCGCCAGCGGGCCGTCGACGGACAGCCTGGGGTCGACCTTGCC
GTTGCGCCGGTACATGTCGGCGTAGGCGGCCTTCGGCGCGCGCTCGCGGGCGTCGAGGAAGCGATAGGTCGG
CTGCGCGCCGGCCTGGCGCAGAAGGAAGAATCCACCGCCGCCGAGTCCCGAGCCGTAAGGCTCGGCTACCGC
CAGGGCAGCGGCGATGGCCGCCGCGGCGTCGAAGGCGTTGCCGCCATTGGCCAGGGTTTCCAGGCCGGCGAC
GGTCGCGGCCGGATGTGGCGTGGCGACGGCGGCCTGCTGCGGTGCGTGGGCGTCGCCGCGAAAGCTGTCGGC
ATGCGCCGCGAGGCTGAGCAGGGACAGGCCGCAGGCGGCGACCAGGGTACGGACGGGCAGGTTCAGGAAGGA
CATGGCGGCTCACTGTTCAGCGGCGTTCGCGGGACGGGACCGTGA