ViewGene

Locus Name:
GeneID:
Location:

GeneID:7105
TrivialName: PA14_04400
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_04400
PAO1 Ortholog Locus:
Sequence Length:2418
Protein Length:805
Start: 395100
Stop: 392683
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCGGGGAAAGCGTAAGCGCCGCACGACGAAGCGTCCGGCGCGCGGGAAATCAGGGCTGGACGGTAGCCGC
CGGGTTGATCACGCGACCCAGGCCGAGGTTGCGCAACGCCAGGTGCAGCGAGCTGTGGATGACCTGCGGGTT
GTCGAAGGTGAGCAACTGGCCGAGCAGGTCCCGGGCCTTGTCCAGGGTGATCTGGCGCAGCAGCCACTTCAC
CTTGGGCAGGTTGGTGGCGTTCATCGACAGGCTGTCGAAGCCCATCGCCATCAGCAGCACGGCAGCCGCGGG
ATCGCCGGCCATCTCGCCGCAGATGCTCACCGGCTTGCCTTCCAGGTGGGCATCGTCGACCACCTTCTTCAA
CGCATGCAGCACGGCCGGATGCAGGTAGTCGTAGAGGTCGGCGACCCGCGGATTGTTGCGGTCGACCGCCAG
CAGGTACTGGGTCAGGTCGTTCGAACCGACCGAAAGGAAGTCGACCTGACGGGCCAGCTCGCGGGTCTGGTA
CACGGCGGCGGGAATCTCGACCATCATGCCGATAGGCGGCATGGCGATGTCCACGCCCTCGTCGCGCACCTC
GCCCCAGGCGCGGTGGATCAGGTGCAGGGCCTCTTCCAGCTCGTGGGTGCCGGAGATCATCGGCAGCAGGAT
GCGCAGGTTGTCCAGTCCTTCGCTGGCCTTGAGCATGGCGCGGGTCTGGACCAGGAAGATCTCCGGGTGGTC
GAGGGTGACGCGGATGCCGCGCCAGCCGAGGAACGGGTTGTCTTCCTTGATCGGGAAGTAGGACAGCGCCTT
GTCGCCGCCGATATCCAGGGTGCGCATGGTCACCGGCAGCGGGTGGAAGGCACTGAGCTGCTCGCGGTAGAT
CGCCAGCTGTTCCTTCTCGCTGGGGAAGCGGTCGTTGATCATGAACGGCACTTCGGTGCGGTACAGGCCCAC
GCCCTCGGCGCCACGCTCCTGGGCGCGGGCGACATCGGCGAGCAGGCCGGTGTTGACCCAGAGCGGCATGCG
GTGGCCGTCGAGGGTCTCGCAGGGCAGCTCGCGCAGGGCCGCCAGGCCCTTGCTCAGCTCGCGCTCCTCGGC
GACCACGTCGCTGTACTGGCGCACCAGCTCGGCGGAGGGGTTGGTGTAGACCTCGCCGTGGTAGCCATCGAC
GATCAGGTCGATACCGTCGACCTTGGAGTACGGCAGGTCGACCGCCCCCATCACCGTGGGGATGCCCATGGC
ACGGGCGAGGATCGCCACGTGCGAGTTGCCCGAGCCGAGCACCGAGACCAGGCCGACCAGGCGCCCTTCCGG
CACCTCGCCGAGCATCGCCGGCGACAGCTCCTCGCTGACGATGATGGTCTGCTCCGGGTAGGTCAGGTTCTG
CTTGCGTTCTTCCTGCAGGTAGGCGAGCAGGCGGCGACCGATGTCCTTGACGTCGGAGGCGCGCTCGCGGAG
ATAGGCGTCGTCCATCAGCTCGAAGCGCTGCACGTGCTCCATCACCACCTGGCGCAGGGCGCCCTGGGCCCA
CTGGCCGGTACGGATGATGCGCTTGACCTCGTTGCCGATGGAGGCATCGTCGAGCATCATCAGGTAGACGTC
GAACAGCGCGCGTTCTTCCTTGCGCAACTGGCTGGCGAGCTTGCTCGACAGCGCGCGCATGTCGGCGCGAAC
GCCCTCCAGGGCCTGCTTGAACAGGGCGATCTCGGCGTCGATGTCGTCGACCTGCTTGTCCGGCACCACTTC
CAGGTCGGCCGGAGGCAACACCACCACCGCCTTGCCCACCCCGACCCCGGGGGCGCCGGGCACGCCGACGAA
CTTGGCTTCCTGGATGCCCTTGCCGAGCTTGCCCAGGCCGCGGATCGAACCGGTCGCCTCGGCATGCGCGAT
GACCCCGGCGAGCTGGGCGCTCATGGTGACGAGGAAGGCCTCCTCGCCTTCGTCGAACTGGCGGCGCTCCTT
CTGCTGCACCACCAGCACCCCCATCACCCGCCTATGGTGGATGATCGGCGCGCCGAGGAACGACGCGTAGCG
CTCCTCGCCGGTCTCGGCGAAATAGCGGTAGCGCGGGTGGGCGGCGGCGTTCTCCAGGTTGAGCGGCTCCTC
GCGGGTGCCGACCAGGCCGACCAGGCCTTCGCTGGGGGCCATGCTGACCTTGCCGATGGAACGCTTGTTGAG
GCCTTCGGTGGCCATCAGGACGAAACGCTGGGTCTCGGTGTCGAGCAGGTACACCGAGCAGACCTGGGTACC
CATGGCTTCCTTGACCCGCTGCACGATGATGCCCAGCGCCGCCTTCAGATCCTTGGCGGAGTTCACTTCCTG
GACGATCTTGCGCAGCGTGTTGAGCATGCTCGGGGCCTTGTCTCCGTGTTCAGTCCCGCGCCAGAAGGCGCG
GGGCCAGTTCCTTCAGGGCGCGGCGGTAGACCTCGCGCTTGA
Translation:
MRGKRKRRTTKRPARGKSGLDGSRRVDHATQAEVAQRQVQRAVDDLRVVEGEQLAEQVPGLVQGDLAQQPLH
LGQVGGVHRQAVEAHRHQQHGSRGIAGHLAADAHRLAFQVGIVDHLLQRMQHGRMQVVVEVGDPRIVAVDRQ
QVLGQVVRTDRKEVDLTGQLAGLVHGGGNLDHHADRRHGDVHALVAHLAPGAVDQVQGLFQLVGAGDHRQQD
AQVVQSFAGLEHGAGLDQEDLRVVEGDADAAPAEERVVFLDREVGQRLVAADIQGAHGHRQRVEGTELLAVD
RQLFLLAGEAVVDHERHFGAVQAHALGATLLGAGDIGEQAGVDPERHAVAVEGLAGQLAQGRQALAQLALLG
DHVAVLAHQLGGGVGVDLAVVAIDDQVDTVDLGVRQVDRPHHRGDAHGTGEDRHVRVARAEHRDQADQAPFR
HLAEHRRRQLLADDDGLLRVGQVLLAFFLQVGEQAATDVLDVGGALAEIGVVHQLEALHVLHHHLAQGALGP
LAGTDDALDLVADGGIVEHHQVDVEQRAFFLAQLAGELARQRAHVGANALQGLLEQGDLGVDVVDLLVRHHF
QVGRRQHHHRLAHPDPGGAGHADELGFLDALAELAQAADRTGRLGMRDDPGELGAHGDEEGLLAFVELAALL
LLHHQHPHHPPMVDDRRAEERRVALLAGLGEIAVARVGGGVLQVERLLAGADQADQAFAGGHADLADGTLVE
AFGGHQDETLGLGVEQVHRADLGTHGFLDPLHDDAQRRLQILGGVHFLDDLAQRVEHARGLVSVFSPAPEGA
GPVPSGRGGRPRA*
AnnotationID:7105GeneID:7105
AnnotatorUID: diggins
Modification Date/Time: 2005-03-24 15:03:49
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16830
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31282
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50107How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6196442Stop: 6194025
Length: 2418
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCGGGGAAAGCGTAAGCGCCGCACGACGAAGCGTCCGGCGCGCGGGAAATCAGGGCTGGACGGTAGCCGC
CGGGTTGATCACGCGACCCAGGCCGAGGTTGCGCAACGCCAGGTGCAGCGAGCTGTGGATGACCTGCGGGTT
GTCGAAGGTGAGCAACTGGCCGAGCAGGTCCCGGGCCTTGTCCAGGGTGATCTGGCGCAGCAGCCACTTCAC
CTTGGGCAGGTTGGTGGCGTTCATCGACAGGCTGTCGAAGCCCATCGCCATCAGCAGCACGGCAGCCGCGGG
ATCGCCGGCCATCTCGCCGCAGATGCTCACCGGCTTGCCTTCCAGGTGGGCATCGTCGACCACCTTCTTCAA
CGCATGCAGCACGGCCGGATGCAGGTAGTCGTAGAGGTCGGCGACCCGCGGATTGTTGCGGTCGACCGCCAG
CAGGTACTGGGTCAGGTCGTTCGAACCGACCGAAAGGAAGTCGACCTGACGGGCCAGCTCGCGGGTCTGGTA
CACGGCGGCGGGAATCTCGACCATCATGCCGATAGGCGGCATGGCGATGTCCACGCCCTCGTCGCGCACCTC
GCCCCAGGCGCGGTGGATCAGGTGCAGGGCCTCTTCCAGCTCGTGGGTGCCGGAGATCATCGGCAGCAGGAT
GCGCAGGTTGTCCAGTCCTTCGCTGGCCTTGAGCATGGCGCGGGTCTGGACCAGGAAGATCTCCGGGTGGTC
GAGGGTGACGCGGATGCCGCGCCAGCCGAGGAACGGGTTGTCTTCCTTGATCGGGAAGTAGGACAGCGCCTT
GTCGCCGCCGATATCCAGGGTGCGCATGGTCACCGGCAGCGGGTGGAAGGCACTGAGCTGCTCGCGGTAGAT
CGCCAGCTGTTCCTTCTCGCTGGGGAAGCGGTCGTTGATCATGAACGGCACTTCGGTGCGGTACAGGCCCAC
GCCCTCGGCGCCACGCTCCTGGGCGCGGGCGACATCGGCGAGCAGGCCGGTGTTGACCCAGAGCGGCATGCG
GTGGCCGTCGAGGGTCTCGCAGGGCAGCTCGCGCAGGGCCGCCAGGCCCTTGCTCAGCTCGCGCTCCTCGGC
GACCACGTCGCTGTACTGGCGCACCAGCTCGGCGGAGGGGTTGGTGTAGACCTCGCCGTGGTAGCCATCGAC
GATCAGGTCGATACCGTCGACCTTGGAGTACGGCAGGTCGACCGCCCCCATCACCGTGGGGATGCCCATGGC
ACGGGCGAGGATCGCCACGTGCGAGTTGCCCGAGCCGAGCACCGAGACCAGGCCGACCAGGCGCCCTTCCGG
CACCTCGCCGAGCATCGCCGGCGACAGCTCCTCGCTGACGATGATGGTCTGCTCCGGGTAGGTCAGGTTCTG
CTTGCGTTCTTCCTGCAGGTAGGCGAGCAGGCGGCGACCGATGTCCTTGACGTCGGAGGCGCGCTCGCGGAG
ATAGGCGTCGTCCATCAGCTCGAAGCGCTGCACGTGCTCCATCACCACCTGGCGCAGGGCGCCCTGGGCCCA
CTGGCCGGTACGGATGATGCGCTTGACCTCGTTGCCGATGGAGGCATCGTCGAGCATCATCAGGTAGACGTC
GAACAGCGCGCGTTCTTCCTTGCGCAACTGGCTGGCGAGCTTGCTCGACAGCGCGCGCATGTCGGCGCGAAC
GCCCTCCAGGGCCTGCTTGAACAGGGCGATCTCGGCGTCGATGTCGTCGACCTGCTTGTCCGGCACCACTTC
CAGGTCGGCCGGAGGCAACACCACCACCGCCTTGCCCACCCCGACCCCGGGGGCGCCGGGCACGCCGACGAA
CTTGGCTTCCTGGATGCCCTTGCCGAGCTTGCCCAGGCCGCGGATCGAACCGGTCGCCTCGGCATGCGCGAT
GACCCCGGCGAGCTGGGCGCTCATGGTGACGAGGAAGGCCTCCTCGCCTTCGTCGAACTGGCGGCGCTCCTT
CTGCTGCACCACCAGCACCCCCATCACCCGCCTATGGTGGATGATCGGCGCGCCGAGGAACGACGCGTAGCG
CTCCTCGCCGGTCTCGGCGAAATAGCGGTAGCGCGGGTGGGCGGCGGCGTTCTCCAGGTTGAGCGGCTCCTC
GCGGGTGCCGACCAGGCCGACCAGGCCTTCGCTGGGGGCCATGCTGACCTTGCCGATGGAACGCTTGTTGAG
GCCTTCGGTGGCCATCAGGACGAAACGCTGGGTCTCGGTGTCGAGCAGGTACACCGAGCAGACCTGGGTACC
CATGGCTTCCTTGACCCGCTGCACGATGATGCCCAGCGCCGCCTTCAGATCCTTGGCGGAGTTCACTTCCTG
GACGATCTTGCGCAGCGTGTTGAGCATGCTCGGGGCCTTGTCTCCGTGTTCAGTCCCGCGCCAGAAGGCGCG
GGGCCAGTTCCTTCAGGGCGCGGCGGTAGACCTCGCGCTTGA