ViewGene

Locus Name:
GeneID:
Location:

GeneID:7093
TrivialName: PA14_03910
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_03910
PAO1 Ortholog Locus:
Sequence Length:1623
Protein Length:540
Start: 354175
Stop: 352553
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGTGCAGGCTCTTCTTCTCCGCCTGCACGGGGCCCGCGATCGCCGTAGCCAGAGCGGCTACCAGCAGTGTC
TTGCCAATGGAATGTTGCATGTCCGACTCCTGTTCCGGGCCTTTTCACGGCAGCACCCTGCCTGTTCGACCC
GTGTTCTTCAAGTGCCGATGTAAGCCCAGATCACTCGGGTTTCATGACAACCCGACGATTCCGCCGGGAAAC
ATGAGTGAGCTGGGTTCCCTACCGGCGTGTTGGTTTCAGGTTTTCCGGGCCCTCGGCCCCGGTGCGAGCGAC
ACGACCGGCCCCGGCGCGGCAGATTGGCGCAGCGCCCATGGCAGCGTCTTCGTCGTCGATACTGCGTCCGGT
CGTCGGGCCCCCAGGAGGAAGCGTCTGGACGAACGGGCAAAAGAGTCGAACCTCTTCGCAGGGGAGCGTGGC
CGGAGGAAACCCGGCCGCGTTCCGGTTCTCTCGTGCCGGAGCGCCGGCGGCTTCAGGCGCCGCCGGGCTCCT
CGCGGATCACTTGCCGGACTTGATCTTGGTCCAGCTGCGGGTCATCGCCCGCTGGGTCTTGGCCGGCAGGTC
GGGGAAGGTATACAGCTTCTTCATGACCTCTTCGCTCGGGTAGATGCCCGGGTCGTTGCGGATCGCCTCGGA
CACCAGCGGGGTGGCCGCTGCGTTGCCGTTGGGGAACTGAACCACGTCGGTGATCTCGGCCATGATTTCCGG
CTTCATCAGGAAGTTGACGAAGGCCAGGGCGCCCTCGGTGTTCTCGGCGTCCTTGGGAATGGCGACCATGTC
GAAGAAGCTGCCGGCGCCTTCCTTGGGAATGTTGTACTTGACGGTGACCTTGTTCTTCGCCTCTTCGGCGCG
GGACTTGGCCTGGTAGATGTCGCCGGAGTAGCCGATGGCGACGCAGATGTTGCCGTTGGCCAGGTCGGAAAT
GTACTTCGACGAGTGGAAGTAGGTGACGTAGGGACGGATCTTCAGGAACAGCTCTTCGGCCGCCTTGAGTTC
CTTGGGATTGTCGGTGTCCGGCTTGTAGCCGAGATAGTGCAGGGCCGCCGGGAGAATCTCGGTCGGCGAGTC
GAGGAAGCTGACGCCGCACTGCTTCAGCTTCTGGATGTTCTCCGGCTTGAATACCAGGTCCCAGGAATCCAC
CGGCGCATTGTCGCCGAAGGCCGCCTTGACCTTGTCCGGGTTGTAGCCGATGCCGATGGTGCCCCACATGTA
GGGAATCGCATGCTCGTTGCCCGGGTCGCTGACTTCCAGGGTGTGCATCAGGTCCTTGTTCAGGTTCTTCCA
GTTCGGCAGCTTGGACTTGTCGAGCTTCTGGTAGACCCCGGCCTTGATCTGCTTGGCGAGGAAGGAGTTGGA
CGGCACCACCACGTCGTACCCGGACTTGCCCGCCAGCAACTTGGCTTCCAGCACTTCGTTGCTGTCGTAGAC
GTCGTAGACGACCTTGATCCCGGTTTCCTTGGTGAACTTCTCCAGGGTGTCCGGCGCGATGTAGTCGGACCA
GTTGTACACGTGCAGTACCTTGTTGTCCGCAGCCTGCGCCATACCGGCCACAGAGCCCGCCAAGGTCAGGGC
GAGCAGGGTCTTACCGAAACGTTTCATCATGCGGGGTAG
Translation:
MCRLFFSACTGPAIAVARAATSSVLPMECCMSDSCSGPFHGSTLPVRPVFFKCRCKPRSLGFHDNPTIPPGN
MSELGSLPACWFQVFRALGPGASDTTGPGAADWRSAHGSVFVVDTASGRRAPRRKRLDERAKESNLFAGERG
RRKPGRVPVLSCRSAGGFRRRRAPRGSLAGLDLGPAAGHRPLGLGRQVGEGIQLLHDLFARVDARVVADRLG
HQRGGRCVAVGELNHVGDLGHDFRLHQEVDEGQGALGVLGVLGNGDHVEEAAGAFLGNVVLDGDLVLRLFGA
GLGLVDVAGVADGDADVAVGQVGNVLRRVEVGDVGTDLQEQLFGRLEFLGIVGVRLVAEIVQGRRENLGRRV
EEADAALLQLLDVLRLEYQVPGIHRRIVAEGRLDLVRVVADADGAPHVGNRMLVARVADFQGVHQVLVQVLP
VRQLGLVELLVDPGLDLLGEEGVGRHHHVVPGLARQQLGFQHFVAVVDVVDDLDPGFLGELLQGVRRDVVGP
VVHVQYLVVRSLRHTGHRARQGQGEQGLTETFHHAG*
AnnotationID:7093GeneID:7093
AnnotatorUID: diggins
Modification Date/Time: 2005-03-24 07:07:32
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13847
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31259
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50095How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6155517Stop: 6153895
Length: 1623
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGTGCAGGCTCTTCTTCTCCGCCTGCACGGGGCCCGCGATCGCCGTAGCCAGAGCGGCTACCAGCAGTGTC
TTGCCAATGGAATGTTGCATGTCCGACTCCTGTTCCGGGCCTTTTCACGGCAGCACCCTGCCTGTTCGACCC
GTGTTCTTCAAGTGCCGATGTAAGCCCAGATCACTCGGGTTTCATGACAACCCGACGATTCCGCCGGGAAAC
ATGAGTGAGCTGGGTTCCCTACCGGCGTGTTGGTTTCAGGTTTTCCGGGCCCTCGGCCCCGGTGCGAGCGAC
ACGACCGGCCCCGGCGCGGCAGATTGGCGCAGCGCCCATGGCAGCGTCTTCGTCGTCGATACTGCGTCCGGT
CGTCGGGCCCCCAGGAGGAAGCGTCTGGACGAACGGGCAAAAGAGTCGAACCTCTTCGCAGGGGAGCGTGGC
CGGAGGAAACCCGGCCGCGTTCCGGTTCTCTCGTGCCGGAGCGCCGGCGGCTTCAGGCGCCGCCGGGCTCCT
CGCGGATCACTTGCCGGACTTGATCTTGGTCCAGCTGCGGGTCATCGCCCGCTGGGTCTTGGCCGGCAGGTC
GGGGAAGGTATACAGCTTCTTCATGACCTCTTCGCTCGGGTAGATGCCCGGGTCGTTGCGGATCGCCTCGGA
CACCAGCGGGGTGGCCGCTGCGTTGCCGTTGGGGAACTGAACCACGTCGGTGATCTCGGCCATGATTTCCGG
CTTCATCAGGAAGTTGACGAAGGCCAGGGCGCCCTCGGTGTTCTCGGCGTCCTTGGGAATGGCGACCATGTC
GAAGAAGCTGCCGGCGCCTTCCTTGGGAATGTTGTACTTGACGGTGACCTTGTTCTTCGCCTCTTCGGCGCG
GGACTTGGCCTGGTAGATGTCGCCGGAGTAGCCGATGGCGACGCAGATGTTGCCGTTGGCCAGGTCGGAAAT
GTACTTCGACGAGTGGAAGTAGGTGACGTAGGGACGGATCTTCAGGAACAGCTCTTCGGCCGCCTTGAGTTC
CTTGGGATTGTCGGTGTCCGGCTTGTAGCCGAGATAGTGCAGGGCCGCCGGGAGAATCTCGGTCGGCGAGTC
GAGGAAGCTGACGCCGCACTGCTTCAGCTTCTGGATGTTCTCCGGCTTGAATACCAGGTCCCAGGAATCCAC
CGGCGCATTGTCGCCGAAGGCCGCCTTGACCTTGTCCGGGTTGTAGCCGATGCCGATGGTGCCCCACATGTA
GGGAATCGCATGCTCGTTGCCCGGGTCGCTGACTTCCAGGGTGTGCATCAGGTCCTTGTTCAGGTTCTTCCA
GTTCGGCAGCTTGGACTTGTCGAGCTTCTGGTAGACCCCGGCCTTGATCTGCTTGGCGAGGAAGGAGTTGGA
CGGCACCACCACGTCGTACCCGGACTTGCCCGCCAGCAACTTGGCTTCCAGCACTTCGTTGCTGTCGTAGAC
GTCGTAGACGACCTTGATCCCGGTTTCCTTGGTGAACTTCTCCAGGGTGTCCGGCGCGATGTAGTCGGACCA
GTTGTACACGTGCAGTACCTTGTTGTCCGCAGCCTGCGCCATACCGGCCACAGAGCCCGCCAAGGTCAGGGC
GAGCAGGGTCTTACCGAAACGTTTCATCATGCGGGGTAG