ViewGene

Locus Name:
GeneID:
Location:

GeneID:7092
TrivialName: PA14_03890
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_03890
PAO1 Ortholog Locus:
Sequence Length:1719
Protein Length:572
Start: 352641
Stop: 350923
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGTCCGCAGCCTGCGCCATACCGGCCACAGAGCCCGCCAAGGTCAGGGCGAGCAGGGTCTTACCGAAACGT
TTCATCATGCGGGGTAGCTCCATTTTTGTTGAAGTATCCGGGCGGTGGCGCAACCGATCGCGTCACCACCCG
GTGAGCCTGGCCAACGCACTGGCGCAGTCTGGCAAAAGTCCGCTCAGGGACTCAAGCCAgGACGGCGGCGGC
GGTCTGATCGAGGCACTTGCGCGCCAGGGTGATCAACTCATCGATCTGCGACGGATCGATCACCAGCGGCGG
CGAGATAATCATAGTGTCGCCCACCGCGCGCATGATCAAACCGTTGCGGAAACAATGTTCCCGGCACAGCAT
CCCGACGCCCTTGTCGGTGAAACGCTCGCGGGTCTTCTTGTTCTTGACCagCTCCAGGGCGGCGACCATGCC
GACCCCGCGCGCTTCGCCCACCAACGGGTGGTCGGCCAGCTCCTGCCAGCGTTTCTGCAAATACGGTGCCGT
TTCCGCCTTCACCTTCTCGATGATCTTCTCTTCGCGCAGGATGCGGATGTTCTCCAGGGCCACGGCGGCCGC
CACCGGGTGACCGGAATAGGTGAAGCCGTGGTAGAACTCGCCGCCCTGGTTGAGCACTTCGACGATCTCGTC
GCGCACCACCACCCCGCCCATGGGGATGTAGCCGGAGGTGAGGCCCTTGGCGATCGGCATCAGGTCCGGGGC
GTTGCCGTAGTACTGGCTGCCGAACCACTCGCCGGTACGGCCGAAGCCGCAGATCACTTCGTCGGCGATGAA
CAGGATGTCGTACTTGGCGAGGATCTCGCGGATCTTCGGCCAGTAGGTGTCCGGCGGGACGATCACGCCGCC
GGCGCCCTGGATCGGCTCGGCGATGAAGGCGGCGACGTTTTCCTCGCCCACTTCGAGAATCTTCTTCTCCAG
CTGCTCGGCGGCCCAGACGCCGAATTCGTCCGGCGACATGTCGCCGCCCTCGCCGTACCAGTAGGGCTGGGC
GATGTGGACGATGCCCGGGATGGGGAAATCACCCTGCTCATGCAACGCCTTCATGCCGCCCAGGCTGACGCC
GGCGACGGTGGAGCCGTGGTAGCCGTTCCAGCGGCCGATCACCACTTTCTTCTGCGGCTGGCCCTTGGTCGC
CCAATAGTGGCGGACCATACGCAGCACGGTGTCGTTGGCCTCGGAGCCGGAGCCGGTGAAGAACACGTGGTT
CATGCCTTCCGGAGCGACGTCGGCGATCGCCTTGGCCAGCTCGACCACCGGCGGGTGGGCGGTCTGGAAGAA
CAGGTTGTAGAACGGCAACTCGCGCATCTGCCGGGTGGCGGCCTGGACCAGCTCCTCGCGGCCGTAGCCGAC
GTTGACGCACCAGAGGCCGGCCATCGCATCGAGGATCTTGTTGCCCTCGCTGTCCCAGATATAGACGCCTTC
GGCCTTGGTGATGATCCGCGCGCCCTTCTCGTTCAACTGCTTGTAGTCGGTGAACGGCGGCAGATGGTGGTC
GCGGCTCAACGCCTGCCACTCACGGGTCTTGGCGTTGGTGATTTGGCTGTTCATGTCACACCTCTTCTATTC
AAGACTGTCCGGGAGCGGCGGACCACGCCGGCCGCCCCCGGTCAGGATCAAACGGAAAGCAGGAGGAATTCC
CGCTCCCAGGAGCTGATTACCCGCTTGAAATTCTCGTGCTCCGCACGCTTCACCGCGACGTAG
Translation:
MSAACAIPATEPAKVRASRVLPKRFIMRGSSIFVEVSGRWRNRSRHHPVSLANALAQSGKSPLRDSSQDGGG
GLIEALARQGDQLIDLRRIDHQRRRDNHSVAHRAHDQTVAETMFPAQHPDALVGETLAGLLVLDQLQGGDHA
DPARFAHQRVVGQLLPAFLQIRCRFRLHLLDDLLFAQDADVLQGHGGRHRVTGIGEAVVELAALVEHFDDLV
AHHHPAHGDVAGGEALGDRHQVRGVAVVLAAEPLAGTAEAADHFVGDEQDVVLGEDLADLRPVGVRRDDHAA
GALDRLGDEGGDVFLAHFENLLLQLLGGPDAEFVRRHVAALAVPVGLGDVDDARDGEITLLMQRLHAAQADA
GDGGAVVAVPAADHHFLLRLALGRPIVADHTQHGVVGLGAGAGEEHVVHAFRSDVGDRLGQLDHRRVGGLEE
QVVERQLAHLPGGGLDQLLAAVADVDAPEAGHRIEDLVALAVPDIDAFGLGDDPRALLVQLLVVGERRQMVV
AAQRLPLTGLGVGDLAVHVTPLLFKTVRERRTTPAAPGQDQTESRRNSRSQELITRLKFSCSARFTAT*
AnnotationID:7092GeneID:7092
AnnotatorUID: diggins
Modification Date/Time: 2005-03-24 07:07:59
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16819
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31257
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50094How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6153983Stop: 6152265
Length: 1719
Start Codon: TTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGTCCGCAGCCTGCGCCATACCGGCCACAGAGCCCGCCAAGGTCAGGGCGAGCAGGGTCTTACCGAAACGT
TTCATCATGCGGGGTAGCTCCATTTTTGTTGAAGTATCCGGGCGGTGGCGCAACCGATCGCGTCACCACCCG
GTGAGCCTGGCCAACGCACTGGCGCAGTCTGGCAAAAGTCCGCTCAGGGACTCAAGCCAgGACGGCGGCGGC
GGTCTGATCGAGGCACTTGCGCGCCAGGGTGATCAACTCATCGATCTGCGACGGATCGATCACCAGCGGCGG
CGAGATAATCATAGTGTCGCCCACCGCGCGCATGATCAAACCGTTGCGGAAACAATGTTCCCGGCACAGCAT
CCCGACGCCCTTGTCGGTGAAACGCTCGCGGGTCTTCTTGTTCTTGACCagCTCCAGGGCGGCGACCATGCC
GACCCCGCGCGCTTCGCCCACCAACGGGTGGTCGGCCAGCTCCTGCCAGCGTTTCTGCAAATACGGTGCCGT
TTCCGCCTTCACCTTCTCGATGATCTTCTCTTCGCGCAGGATGCGGATGTTCTCCAGGGCCACGGCGGCCGC
CACCGGGTGACCGGAATAGGTGAAGCCGTGGTAGAACTCGCCGCCCTGGTTGAGCACTTCGACGATCTCGTC
GCGCACCACCACCCCGCCCATGGGGATGTAGCCGGAGGTGAGGCCCTTGGCGATCGGCATCAGGTCCGGGGC
GTTGCCGTAGTACTGGCTGCCGAACCACTCGCCGGTACGGCCGAAGCCGCAGATCACTTCGTCGGCGATGAA
CAGGATGTCGTACTTGGCGAGGATCTCGCGGATCTTCGGCCAGTAGGTGTCCGGCGGGACGATCACGCCGCC
GGCGCCCTGGATCGGCTCGGCGATGAAGGCGGCGACGTTTTCCTCGCCCACTTCGAGAATCTTCTTCTCCAG
CTGCTCGGCGGCCCAGACGCCGAATTCGTCCGGCGACATGTCGCCGCCCTCGCCGTACCAGTAGGGCTGGGC
GATGTGGACGATGCCCGGGATGGGGAAATCACCCTGCTCATGCAACGCCTTCATGCCGCCCAGGCTGACGCC
GGCGACGGTGGAGCCGTGGTAGCCGTTCCAGCGGCCGATCACCACTTTCTTCTGCGGCTGGCCCTTGGTCGC
CCAATAGTGGCGGACCATACGCAGCACGGTGTCGTTGGCCTCGGAGCCGGAGCCGGTGAAGAACACGTGGTT
CATGCCTTCCGGAGCGACGTCGGCGATCGCCTTGGCCAGCTCGACCACCGGCGGGTGGGCGGTCTGGAAGAA
CAGGTTGTAGAACGGCAACTCGCGCATCTGCCGGGTGGCGGCCTGGACCAGCTCCTCGCGGCCGTAGCCGAC
GTTGACGCACCAGAGGCCGGCCATCGCATCGAGGATCTTGTTGCCCTCGCTGTCCCAGATATAGACGCCTTC
GGCCTTGGTGATGATCCGCGCGCCCTTCTCGTTCAACTGCTTGTAGTCGGTGAACGGCGGCAGATGGTGGTC
GCGGCTCAACGCCTGCCACTCACGGGTCTTGGCGTTGGTGATTTGGCTGTTCATGTCACACCTCTTCTATTC
AAGACTGTCCGGGAGCGGCGGACCACGCCGGCCGCCCCCGGTCAGGATCAAACGGAAAGCAGGAGGAATTCC
CGCTCCCAGGAGCTGATTACCCGCTTGAAATTCTCGTGCTCCGCACGCTTCACCGCGACGTAG