ViewGene

Locus Name:
GeneID:
Location:

GeneID: 7089

TrivialName: PA14_03750

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_03750

PAO1 Ortholog Locus:

Sequence Length: 1476

Protein Length: 491

Start: 337769

Stop: 336294

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK23765.1| (AE005853) hypothetical protein [Caulobacter crescentus CB15] Identities = 108/419 (25%), Positives = 143/419 (34%), Gaps = 60/419 (14%)

Sequence:

ATGGAGCATCTCCGTGTGGCGGGAAGAAAGCACCGGGCGCCGCCCGGCGCAGTGGGTTCATTCCGGCTGGGC
TCGCAGGCTGGCGGCAGGACGGGTGGCCAGGCTGACCGCGACGAAGGTCGCCAGGCTGGCCAGCAGGCCGTA
GACGATCGGCGAGTTGGCGAGCAGGCCGTCGCGGGCCATGCAGGCGATCACCGCCAGGCAACCGGCGACGAT
GCTGGCGATCGCTCCCTGCGGACTGGCCCGACGCCACAGCAGCGCGCCGACGATCGGCACCAGCAGGCCGCC
GACCAGCAGGTTGTAGGCGATGCTCAGGGCCGCGATGACGTCGTTGACCAGGCACGCCAGGACCAGCATCGC
CACCCCCATCAGCAGGGTGATGCAACGGCTCAGGCGGATGTCGCTGGTGGTACCGGGGCGCAGGAAGCGCGC
ATAGATGTCTTCCTGCAGCACGGTGGCCGCCGCCAGCAGGCACCCGCTGGCGGTGGACATGATCGCCGACAG
CGCGGCCGCCACCACCAGGCCGCGCAGGCCCGGCGCCAGTACCTCGCGGGTGATCTCGGCGTAGGCGTTCTC
CGGCACCGCCAGGTCCGGCAGGAGGACCCGCGCCGCCGCGCCGATCAGCGCGCAGGCGGCGCCGTAGAGCAT
GCAGTAGACGCCGGCACCAAGCCCGGCATAGCGCACCACCGTCTCGCTGCGCGCGGTGAACACTCGCTGCCA
GATGTCCTGGCCGATCAGCGCGCCGAAGAAGTACAGGAGGAAGTAGGTGAGGATGGTATCCAGGCCGATGTG
GCCGAGGTCGAAGAAGCCCGCCGGCAGCACCTCCTGCATGCGCGCCAGGCCACCGGCGCCGTCGATCGACAA
CGGCAGCAGGACCAGGAAGATACCGACGGTCTTGATCACGAACTGGATGATGTCGGTCAGCGTAAGGGACCA
CATGCCGCCGATCACCGAATAGACGATGACGATCCCGCCACCGCAGAGGATCGCCGGGATCCGCGGGATGCC
GAATACCACCTCGGTGACCGAGCCGATGGCGATGGTCGCGGTGACCGCCACCATCAGGTCGTAGGCGACCAT
GACCACCCCGCCGATCAGGCGCGAGGAGGCCTGGTAGCGCTGCTCCAGCACCTGGGTCACGGTGAACACCCG
CAGGCGCGCGATCTGCCGCGAGAACACCAGGCTGAGGACGATGATCCCCAGGCCGAGCATGAACACCAGCCA
CAAGCCGGACAGGCCGAACTGGTAGCCGAGCTTGACCGTACCGATGGTCGACGCGCCGCCGAGCACCACCGC
GGCCATGGTTCCCAGGTAGAGGCCGGGGCCGAGGCGGCGTCCGGCGACGAGGAAATCGCTCTGGCTCTTCGC
CTTGCGCATTCCGTACCAGCCCAGGCCCAGCATGGCCAGGGCGTAGACCAGCATGATCAGGTAATCCAGCAA
CATCGCCCGCGCTCCTTTTCTTGTTGTTCTGCGTGA

Translation:

MEHLRVAGRKHRAPPGAVGSFRLGSQAGGRTGGQADRDEGRQAGQQAVDDRRVGEQAVAGHAGDHRQATGDD
AGDRSLRTGPTPQQRADDRHQQAADQQVVGDAQGRDDVVDQARQDQHRHPHQQGDATAQADVAGGTGAQEAR
IDVFLQHGGRRQQAPAGGGHDRRQRGRHHQAAQARRQYLAGDLGVGVLRHRQVRQEDPRRRADQRAGGAVEH
AVDAGTKPGIAHHRLAARGEHSLPDVLADQRAEEVQEEVGEDGIQADVAEVEEARRQHLLHARQATGAVDRQ
RQQDQEDTDGLDHELDDVGQRKGPHAADHRIDDDDPATAEDRRDPRDAEYHLGDRADGDGRGDRHHQVVGDH
DHPADQARGGLVALLQHLGHGEHPQARDLPREHQAEDDDPQAEHEHQPQAGQAELVAELDRTDGRRAAEHHR
GHGSQVEAGAEAASGDEEIALALRLAHSVPAQAQHGQGVDQHDQVIQQHRPRSFSCCSA*

AnnotationID:7089 GeneID:7089

AnnotatorUID: diggins

Modification Date/Time: 2004-08-04 12:12:02

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:13841

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:31251

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

ReferenceID:33623

Author/Investigator(s):

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: Misc (text/plain)

Data: 7089_cdd.html

URL:

GC ORFID: `50091`	How Found: `Glimmer`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name:	Glimmer Score:
Start: `6139110`	Stop: `6137635`
Length: `1476`
Start Codon: `ATG`	Truncated Start:
Stop Codon: `TGA`	Truncated Stop:
Homolog:	Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGAGCATCTCCGTGTGGCGGGAAGAAAGCACCGGGCGCCGCCCGGCGCAGTGGGTTCATTCCGGCTGGGC TCGCAGGCTGGCGGCAGGACGGGTGGCCAGGCTGACCGCGACGAAGGTCGCCAGGCTGGCCAGCAGGCCGTA GACGATCGGCGAGTTGGCGAGCAGGCCGTCGCGGGCCATGCAGGCGATCACCGCCAGGCAACCGGCGACGAT GCTGGCGATCGCTCCCTGCGGACTGGCCCGACGCCACAGCAGCGCGCCGACGATCGGCACCAGCAGGCCGCC GACCAGCAGGTTGTAGGCGATGCTCAGGGCCGCGATGACGTCGTTGACCAGGCACGCCAGGACCAGCATCGC CACCCCCATCAGCAGGGTGATGCAACGGCTCAGGCGGATGTCGCTGGTGGTACCGGGGCGCAGGAAGCGCGC ATAGATGTCTTCCTGCAGCACGGTGGCCGCCGCCAGCAGGCACCCGCTGGCGGTGGACATGATCGCCGACAG CGCGGCCGCCACCACCAGGCCGCGCAGGCCCGGCGCCAGTACCTCGCGGGTGATCTCGGCGTAGGCGTTCTC CGGCACCGCCAGGTCCGGCAGGAGGACCCGCGCCGCCGCGCCGATCAGCGCGCAGGCGGCGCCGTAGAGCAT GCAGTAGACGCCGGCACCAAGCCCGGCATAGCGCACCACCGTCTCGCTGCGCGCGGTGAACACTCGCTGCCA GATGTCCTGGCCGATCAGCGCGCCGAAGAAGTACAGGAGGAAGTAGGTGAGGATGGTATCCAGGCCGATGTG GCCGAGGTCGAAGAAGCCCGCCGGCAGCACCTCCTGCATGCGCGCCAGGCCACCGGCGCCGTCGATCGACAA CGGCAGCAGGACCAGGAAGATACCGACGGTCTTGATCACGAACTGGATGATGTCGGTCAGCGTAAGGGACCA CATGCCGCCGATCACCGAATAGACGATGACGATCCCGCCACCGCAGAGGATCGCCGGGATCCGCGGGATGCC GAATACCACCTCGGTGACCGAGCCGATGGCGATGGTCGCGGTGACCGCCACCATCAGGTCGTAGGCGACCAT GACCACCCCGCCGATCAGGCGCGAGGAGGCCTGGTAGCGCTGCTCCAGCACCTGGGTCACGGTGAACACCCG CAGGCGCGCGATCTGCCGCGAGAACACCAGGCTGAGGACGATGATCCCCAGGCCGAGCATGAACACCAGCCA CAAGCCGGACAGGCCGAACTGGTAGCCGAGCTTGACCGTACCGATGGTCGACGCGCCGCCGAGCACCACCGC GGCCATGGTTCCCAGGTAGAGGCCGGGGCCGAGGCGGCGTCCGGCGACGAGGAAATCGCTCTGGCTCTTCGC CTTGCGCATTCCGTACCAGCCCAGGCCCAGCATGGCCAGGGCGTAGACCAGCATGATCAGGTAATCCAGCAA CATCGCCCGCGCTCCTTTTCTTGTTGTTCTGCGTGA