ViewGene

Locus Name:
GeneID:
Location:

GeneID:7088
TrivialName: PA14_03740
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_03740
PAO1 Ortholog Locus:
Sequence Length:1767
Protein Length:588
Start: 336119
Stop: 337885
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK53449.1| (AY032926) unknown [Streptomyces aureofaciens]
Identities = 175/593 (29%), Positives = 202/593 (34%), Gaps = 126/593 (21%)
Sequence:
GTGCGTCAGCCGCCTCTGCAACGCGCCGGCTCCTGCCGGCGCGTTGCGTTTCGGCGTCGCCAATGCGACGCC
CCGCCGATACTTCTCTTCCTCCGCAAGTCGACTTGCCCGATCCGGGATTCAGCCCGGGCGGCGCCCGGCCTA
TCTTCGGCGTGCCCAGGCGCCACGCCGGGCGTCACGCAGAACAACAAGAAAAGGAGCGCGGGCGATGTTGCT
GGATTACCTGATCATGCTGGTCTACGCCCTGGCCATGCTGGGCCTGGGCTGGTACGGAATGCGCAAGGCGAA
GAGCCAGAGCGATTTCCTCGTCGCCGGACGCCGCCTCGGCCCCGGCCTCTACCTGGGAACCATGGCCGCGGT
GGTGCTCGGCGGCGCGTCGACCATCGGTACGGTCAAGCTCGGCTACCAGTTCGGCCTGTCCGGCTTGTGGCT
GGTGTTCATGCTCGGCCTGGGGATCATCGTCCTCAGCCTGGTGTTCTCGCGGCAGATCGCGCGCCTGCGGGT
GTTCACCGTGACCCAGGTGCTGGAGCAGCGCTACCAGGCCTCCTCGCGCCTGATCGGCGGGGTGGTCATGGT
CGCCTACGACCTGATGGTGGCGGTCACCGCGACCATCGCCATCGGCTCGGTCACCGAGGTGGTATTCGGCAT
CCCGCGGATCCCGGCGATCCTCTGCGGTGGCGGGATCGTCATCGTCTATTCGGTGATCGGCGGCATGTGGTC
CCTTACGCTGACCGACATCATCCAGTTCGTGATCAAGACCGTCGGTATCTTCCTGGTCCTGCTGCCGTTGTC
GATCGACGGCGCCGGTGGCCTGGCGCGCATGCAGGAGGTGCTGCCGGCGGGCTTCTTCGACCTCGGCCACAT
CGGCCTGGATACCATCCTCACCTACTTCCTCCTGTACTTCTTCGGCGCGCTGATCGGCCAGGACATCTGGCA
GCGAGTGTTCACCGCGCGCAGCGAGACGGTGGTGCGCTATGCCGGGCTTGGTGCCGGCGTCTACTGCATGCT
CTACGGCGCCGCCTGCGCGCTGATCGGCGCGGCGGCGCGGGTCCTCCTGCCGGACCTGGCGGTGCCGGAGAA
CGCCTACGCCGAGATCACCCGCGAGGTACTGGCGCCGGGCCTGCGCGGCCTGGTGGTGGCGGCCGCGCTGTC
GGCGATCATGTCCACCGCCAGCGGGTGCCTGCTGGCGGCGGCCACCGTGCTGCAGGAAGACATCTATGCGCG
CTTCCTGCGCCCCGGTACCACCAGCGACATCCGCCTGAGCCGTTGCATCACCCTGCTGATGGGGGTGGCGAT
GCTGGTCCTGGCGTGCCTGGTCAACGACGTCATCGCGGCCCTGAGCATCGCCTACAACCTGCTGGTCGGCGG
CCTGCTGGTGCCGATCGTCGGCGCGCTGCTGTGGCGTCGGGCCAGTCCGCAGGGAGCGATCGCCAGCATCGT
CGCCGGTTGCCTGGCGGTGATCGCCTGCATGGCCCGCGACGGCCTGCTCGCCAACTCGCCGATCGTCTACGG
CCTGCTGGCCAGCCTGGCGACCTTCGTCGCGGTCAGCCTGGCCACCCGTCCTGCCGCCAGCCTGCGAGCCCA
GCCGGAATGAACCCACTGCGCCGGGCGGCGCCCGGTGCTTTCTTCCCGCCACACGGAGATGCTCCATGTCGA
ACGACCATCCGCAGCCCCTCGACGCCGCCGAGATTCCACGCTTCGCCGGTATCCCGACCTTCATGCGCCTGC
CGGCGTTCACCGACCCGGCGGCGCTGCAGGTCGGCCTGA
Translation:
MRQPPLQRAGSCRRVAFRRRQCDAPPILLFLRKSTCPIRDSARAAPGLSSACPGATPGVTQNNKKRSAGDVA
GLPDHAGLRPGHAGPGLVRNAQGEEPERFPRRRTPPRPRPLPGNHGRGGARRRVDHRYGQARLPVRPVRLVA
GVHARPGDHRPQPGVLAADRAPAGVHRDPGAGAALPGLLAPDRRGGHGRLRPDGGGHRDHRHRLGHRGGIRH
PADPGDPLRWRDRHRLFGDRRHVVPYADRHHPVRDQDRRYLPGPAAVVDRRRRWPGAHAGGAAGGLLRPRPH
RPGYHPHLLPPVLLRRADRPGHLAASVHRAQRDGGALCRAWCRRLLHALRRRLRADRRGGAGPPAGPGGAGE
RLRRDHPRGTGAGPARPGGGGRAVGDHVHRQRVPAGGGHRAAGRHLCALPAPRYHQRHPPEPLHHPADGGGD
AGPGVPGQRRHRGPEHRLQPAGRRPAGADRRRAAVASGQSAGSDRQHRRRLPGGDRLHGPRRPARQLADRLR
PAGQPGDLRRGQPGHPSCRQPASPAGMNPLRRAAPGAFFPPHGDAPCRTTIRSPSTPPRFHASPVSRPSCAC
RRSPTRRRCRSA*
AnnotationID:7088GeneID:7088
AnnotatorUID: diggins
Modification Date/Time: 2005-03-24 06:06:40
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:16816
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31249
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50090How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6137460Stop: 6139226
Length: 1767
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCGTCAGCCGCCTCTGCAACGCGCCGGCTCCTGCCGGCGCGTTGCGTTTCGGCGTCGCCAATGCGACGCC
CCGCCGATACTTCTCTTCCTCCGCAAGTCGACTTGCCCGATCCGGGATTCAGCCCGGGCGGCGCCCGGCCTA
TCTTCGGCGTGCCCAGGCGCCACGCCGGGCGTCACGCAGAACAACAAGAAAAGGAGCGCGGGCGATGTTGCT
GGATTACCTGATCATGCTGGTCTACGCCCTGGCCATGCTGGGCCTGGGCTGGTACGGAATGCGCAAGGCGAA
GAGCCAGAGCGATTTCCTCGTCGCCGGACGCCGCCTCGGCCCCGGCCTCTACCTGGGAACCATGGCCGCGGT
GGTGCTCGGCGGCGCGTCGACCATCGGTACGGTCAAGCTCGGCTACCAGTTCGGCCTGTCCGGCTTGTGGCT
GGTGTTCATGCTCGGCCTGGGGATCATCGTCCTCAGCCTGGTGTTCTCGCGGCAGATCGCGCGCCTGCGGGT
GTTCACCGTGACCCAGGTGCTGGAGCAGCGCTACCAGGCCTCCTCGCGCCTGATCGGCGGGGTGGTCATGGT
CGCCTACGACCTGATGGTGGCGGTCACCGCGACCATCGCCATCGGCTCGGTCACCGAGGTGGTATTCGGCAT
CCCGCGGATCCCGGCGATCCTCTGCGGTGGCGGGATCGTCATCGTCTATTCGGTGATCGGCGGCATGTGGTC
CCTTACGCTGACCGACATCATCCAGTTCGTGATCAAGACCGTCGGTATCTTCCTGGTCCTGCTGCCGTTGTC
GATCGACGGCGCCGGTGGCCTGGCGCGCATGCAGGAGGTGCTGCCGGCGGGCTTCTTCGACCTCGGCCACAT
CGGCCTGGATACCATCCTCACCTACTTCCTCCTGTACTTCTTCGGCGCGCTGATCGGCCAGGACATCTGGCA
GCGAGTGTTCACCGCGCGCAGCGAGACGGTGGTGCGCTATGCCGGGCTTGGTGCCGGCGTCTACTGCATGCT
CTACGGCGCCGCCTGCGCGCTGATCGGCGCGGCGGCGCGGGTCCTCCTGCCGGACCTGGCGGTGCCGGAGAA
CGCCTACGCCGAGATCACCCGCGAGGTACTGGCGCCGGGCCTGCGCGGCCTGGTGGTGGCGGCCGCGCTGTC
GGCGATCATGTCCACCGCCAGCGGGTGCCTGCTGGCGGCGGCCACCGTGCTGCAGGAAGACATCTATGCGCG
CTTCCTGCGCCCCGGTACCACCAGCGACATCCGCCTGAGCCGTTGCATCACCCTGCTGATGGGGGTGGCGAT
GCTGGTCCTGGCGTGCCTGGTCAACGACGTCATCGCGGCCCTGAGCATCGCCTACAACCTGCTGGTCGGCGG
CCTGCTGGTGCCGATCGTCGGCGCGCTGCTGTGGCGTCGGGCCAGTCCGCAGGGAGCGATCGCCAGCATCGT
CGCCGGTTGCCTGGCGGTGATCGCCTGCATGGCCCGCGACGGCCTGCTCGCCAACTCGCCGATCGTCTACGG
CCTGCTGGCCAGCCTGGCGACCTTCGTCGCGGTCAGCCTGGCCACCCGTCCTGCCGCCAGCCTGCGAGCCCA
GCCGGAATGAACCCACTGCGCCGGGCGGCGCCCGGTGCTTTCTTCCCGCCACACGGAGATGCTCCATGTCGA
ACGACCATCCGCAGCCCCTCGACGCCGCCGAGATTCCACGCTTCGCCGGTATCCCGACCTTCATGCGCCTGC
CGGCGTTCACCGACCCGGCGGCGCTGCAGGTCGGCCTGA