ViewGene

Locus Name:
GeneID:
Location:

GeneID:7084
TrivialName: PA14_03600
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_03600
PAO1 Ortholog Locus:
Sequence Length:1584
Protein Length:527
Start: 327013
Stop: 325430
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: emb|CAA55649.1| (X79027) unknown [Microbacterium ammoniaphilum]
Identities = 131/430 (30%), Positives = 149/430 (34%), Gaps = 111/430 (25%)
Sequence:
ATGGCTCGGCGGCGACGCACCAAGGCAGGCCACCGGCGTGCTCGGCCTGGCCCTGGCGGCCTACGCGCTGCT
CGGCCTGGCCGCGATCCCGCTGCACCTGCCGGCACGCCACGAGCCCTGGGCCGGCCCGCTGGTCGGGCTGGC
GACCGGCGCGCTGACCGCGGTCACCGGGGTTTTCGTGATTCCCGCGGTGCCCTACCTGGGAGCCCTACGATT
GCAGCGCGACGAACTGGTCCAGGCCCTCGGCCTGTCGTTCAGCGCCTCGACCCTGGCCCTGGCGGTCACTCT
CGGCGTGCACGGCGACCTGCTCGAACCGCAGATGCTCGGCGCCTCGCTGCTGACCCTGGTCCCGGCGCTGGG
CGGGATGCTCCTCGGCCAGTGGCTGCGCCAGCGGATCAGCGCGACGCTGTTCAGGCGCTGCTTCTTCGTCGG
TCTCCTGCTGCTCGGCGCCGACCTCGCCTGGCGCGGTTTCCACTGACGCCAGGGACGCATTGCGCACCCGCC
AGGGCGGGCCTGCGGCCTTCGCGGGACTTCCGACGAACGGCACAAGCCGCTATCATCCGCCGCCGCGCGACC
CCCACCGGGCGCGCGGCACCGGGCGGAACACGCCCGTCCGGCACGGAACGCCACCTATCGCAAGGAGCACAC
GATGAAGACCCGTCTTTCCCTTTCCGCCCTGGCCCTCGCCTGCGCCACCCTGGCCGGCTGCCAGAACCTGCC
CCAGGGGGACCTCATGCAGCACGGCATGATGGCGGTGAAGGCCGCCACCCTGAGCGACGCCGAGGTCCGCCA
GGTCGCCGACCAGGCCTGCGCCGAGTCCGACCAGCAAAACCGCATCGCCCCGGCCAACAGCAAGTACGGCCA
GCGCCTGGACAAGATCGCCAAGGCCCTGGGCGACCAGATCGACGGCGTGCCGGTGAACTACAAGGTCTACCT
CACCGAGGAGGTCAACGCCTGGGCCATGGCCAACGGCTGCATCCGCGTCTACAGCGGGCTGATGGAGCTGAT
GAGCGACAACGAGATCGAAGGCGTGCTCGGCCACGAGATGGGCCACGTCGCCCTCGGCCACACCCGCAAGGC
CGCCCAGACCGCCTACGCGGCCGCCGCGGTGCGCGGCGCCGCCGGCGCCTCgaagAGCGGCGCGCTGGCCGC
CCTGTCCGGCTCCCAGCTGGGCGAACTCACCGAATCGCTGATCAACGCGCAGTTCTCCCAGTCCCAGGAATC
CGACGCCGACGATTTCTCCTACGAGCTACTGAAGAAGCGCGGAGTGAACACCCAGGGCCTGGTCACCGCCTT
CGAGAAGCTGGCCAAGCTGGGCGGCGGCGACAGCAGCATGTTCGATTCGCACCCGGGCTCCCAGGCCCGCGC
CGATCACATCCGCCAGCGCATCGCCGCGGATCGCAAGTAACGCTCCCGCCCCGGTCTCCCGCGCTCGCGGGA
GACCGCCTCACGCCGCCCGCTTGTGCTCGCGAATGCAGGTCGGGCCGGCGCGCTCCTCGACCTCGCGCTGCA
CGTCGCCGCGCAGCCCCAGCAGAAAGGCCAGTTCCGCCAGCACGAAGAGCGGACCGACGATCAACCCGCTGA
Translation:
MARRRRTKAGHRRARPGPGGLRAARPGRDPAAPAGTPRALGRPAGRAGDRRADRGHRGFRDSRGALPGSPTI
AARRTGPGPRPVVQRLDPGPGGHSRRARRPARTADARRLAADPGPGAGRDAPRPVAAPADQRDAVQALLLRR
SPAARRRPRLARFPLTPGTHCAPARAGLRPSRDFRRTAQAAIIRRRATPTGRAAPGGTRPSGTERHLSQGAH
DEDPSFPFRPGPRLRHPGRLPEPAPGGPHAARHDGGEGRHPERRRGPPGRRPGLRRVRPAKPHRPGQQQVRP
APGQDRQGPGRPDRRRAGELQGLPHRGGQRLGHGQRLHPRLQRADGADERQRDRRRARPRDGPRRPRPHPQG
RPDRLRGRRGARRRRRLEERRAGRPVRLPAGRTHRIADQRAVLPVPGIRRRRFLLRATEEARSEHPGPGHRL
REAGQAGRRRQQHVRFAPGLPGPRRSHPPAHRRGSQVTLPPRSPALAGDRLTPPACARECRSGRRAPRPRAA
RRRAAPAERPVPPARRADRRSTR*
AnnotationID:7084GeneID:7084
AnnotatorUID: diggins
Modification Date/Time: 2005-03-24 05:05:12
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:13831
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31241
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50086How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6128354Stop: 6126771
Length: 1584
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCTCGGCGGCGACGCACCAAGGCAGGCCACCGGCGTGCTCGGCCTGGCCCTGGCGGCCTACGCGCTGCT
CGGCCTGGCCGCGATCCCGCTGCACCTGCCGGCACGCCACGAGCCCTGGGCCGGCCCGCTGGTCGGGCTGGC
GACCGGCGCGCTGACCGCGGTCACCGGGGTTTTCGTGATTCCCGCGGTGCCCTACCTGGGAGCCCTACGATT
GCAGCGCGACGAACTGGTCCAGGCCCTCGGCCTGTCGTTCAGCGCCTCGACCCTGGCCCTGGCGGTCACTCT
CGGCGTGCACGGCGACCTGCTCGAACCGCAGATGCTCGGCGCCTCGCTGCTGACCCTGGTCCCGGCGCTGGG
CGGGATGCTCCTCGGCCAGTGGCTGCGCCAGCGGATCAGCGCGACGCTGTTCAGGCGCTGCTTCTTCGTCGG
TCTCCTGCTGCTCGGCGCCGACCTCGCCTGGCGCGGTTTCCACTGACGCCAGGGACGCATTGCGCACCCGCC
AGGGCGGGCCTGCGGCCTTCGCGGGACTTCCGACGAACGGCACAAGCCGCTATCATCCGCCGCCGCGCGACC
CCCACCGGGCGCGCGGCACCGGGCGGAACACGCCCGTCCGGCACGGAACGCCACCTATCGCAAGGAGCACAC
GATGAAGACCCGTCTTTCCCTTTCCGCCCTGGCCCTCGCCTGCGCCACCCTGGCCGGCTGCCAGAACCTGCC
CCAGGGGGACCTCATGCAGCACGGCATGATGGCGGTGAAGGCCGCCACCCTGAGCGACGCCGAGGTCCGCCA
GGTCGCCGACCAGGCCTGCGCCGAGTCCGACCAGCAAAACCGCATCGCCCCGGCCAACAGCAAGTACGGCCA
GCGCCTGGACAAGATCGCCAAGGCCCTGGGCGACCAGATCGACGGCGTGCCGGTGAACTACAAGGTCTACCT
CACCGAGGAGGTCAACGCCTGGGCCATGGCCAACGGCTGCATCCGCGTCTACAGCGGGCTGATGGAGCTGAT
GAGCGACAACGAGATCGAAGGCGTGCTCGGCCACGAGATGGGCCACGTCGCCCTCGGCCACACCCGCAAGGC
CGCCCAGACCGCCTACGCGGCCGCCGCGGTGCGCGGCGCCGCCGGCGCCTCgaagAGCGGCGCGCTGGCCGC
CCTGTCCGGCTCCCAGCTGGGCGAACTCACCGAATCGCTGATCAACGCGCAGTTCTCCCAGTCCCAGGAATC
CGACGCCGACGATTTCTCCTACGAGCTACTGAAGAAGCGCGGAGTGAACACCCAGGGCCTGGTCACCGCCTT
CGAGAAGCTGGCCAAGCTGGGCGGCGGCGACAGCAGCATGTTCGATTCGCACCCGGGCTCCCAGGCCCGCGC
CGATCACATCCGCCAGCGCATCGCCGCGGATCGCAAGTAACGCTCCCGCCCCGGTCTCCCGCGCTCGCGGGA
GACCGCCTCACGCCGCCCGCTTGTGCTCGCGAATGCAGGTCGGGCCGGCGCGCTCCTCGACCTCGCGCTGCA
CGTCGCCGCGCAGCCCCAGCAGAAAGGCCAGTTCCGCCAGCACGAAGAGCGGACCGACGATCAACCCGCTGA