ViewGene
Locus Name:
GeneID:
Location:

GeneID:7083
TrivialName: PA14_03570
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_03570
PAO1 Ortholog Locus:
Sequence Length:816
Protein Length:271
Start: 323842
Stop: 324657
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCTGCGGGTAGCGCCAGGGCAGGTCCTCCTCGCGGGGGCCGTAGGCCGCGCCTTCACGGATGCGCGCCAC
CAGCGCCCTTTCGCCTTGCCGCAGGAGCACCCCCTCGGGGGCGGCGGCGAGCGCCCGATCGAGGCTGGCGAG
GTCCTTCTCCAGTTGCGCCGCGTGCTGTTCCTGGAAGCCCTCGCCGCGCAGCAGCAACAGGCTGCCCACCGC
GCGACAGGCCTGGACCTGCAGTTGTTGCAGGGCGCGTTGCTGGTCGTCGAGGGCGGCGCGCGCCGGCAGCGC
CAGCAACAGGCAGCAAAGACAGAGGACAGCGGGAAGCGCGGGACGGGGCATGGGGAGATCCTGTTGTTGTCG
TTATGGATATCCGCACCGAGGGCAGGTGCCCTGCACACGGTAGCCGGCCATGGCGCGCCTGCAAGCGTTCGA
AAGTGTGATTCGCGCTCAGCCGTGGGTGGCCGCGCGCAGGCCGGCGAGGTCGAGGATCTCGATGCCGCCGTA
GCTGAGCTGGAGGATGCCCTGGGCTTCGAGGTCCTTGAGGATTTGGTTGGTGGTCTGCCGCGACAGCGACAG
CATCAATGCCAACTGTTCCTGCGGCAGGTGCAGGACCTGCCGGCTGCGGCTGTTGTCGTAGCCCTCGGCGAG
CATCAGCAGGCGCCGCGCCAGGCGTTGCGCGGCCGGCAGCAGGGCCATCTCTTCCAGGGCGATGAATGCCAG
GCGCAGCTTGTGGCTCATCAGCAGGGCCATGTCGCGCCAGTAATGCGGCTCGCGGCGAAGCAGTTCGAGCAG
CGCCGCCTGCGGTACCTGGAGTAG
Translation:
MLRVAPGQVLLAGAVGRAFTDARHQRPFALPQEHPLGGGGERPIEAGEVLLQLRRVLFLEALAAQQQQAAHR
ATGLDLQLLQGALLVVEGGARRQRQQQAAKTEDSGKRGTGHGEILLLSLWISAPRAGALHTVAGHGAPASVR
KCDSRSAVGGRAQAGEVEDLDAAVAELEDALGFEVLEDLVGGLPRQRQHQCQLFLRQVQDLPAAAVVVALGE
HQQAPRQALRGRQQGHLFQGDECQAQLVAHQQGHVAPVMRLAAKQFEQRRLRYLE*
AnnotationID:7083GeneID:7083
AnnotatorUID: diggins
Modification Date/Time: 2005-03-24 05:05:53
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16808




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:31239




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 50085How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 6125183Stop: 6125998

          
Length: 816


          
Start Codon: TTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
TTGCTGCGGGTAGCGCCAGGGCAGGTCCTCCTCGCGGGGGCCGTAGGCCGCGCCTTCACGGATGCGCGCCAC 
CAGCGCCCTTTCGCCTTGCCGCAGGAGCACCCCCTCGGGGGCGGCGGCGAGCGCCCGATCGAGGCTGGCGAG 
GTCCTTCTCCAGTTGCGCCGCGTGCTGTTCCTGGAAGCCCTCGCCGCGCAGCAGCAACAGGCTGCCCACCGC 
GCGACAGGCCTGGACCTGCAGTTGTTGCAGGGCGCGTTGCTGGTCGTCGAGGGCGGCGCGCGCCGGCAGCGC 
CAGCAACAGGCAGCAAAGACAGAGGACAGCGGGAAGCGCGGGACGGGGCATGGGGAGATCCTGTTGTTGTCG 
TTATGGATATCCGCACCGAGGGCAGGTGCCCTGCACACGGTAGCCGGCCATGGCGCGCCTGCAAGCGTTCGA 
AAGTGTGATTCGCGCTCAGCCGTGGGTGGCCGCGCGCAGGCCGGCGAGGTCGAGGATCTCGATGCCGCCGTA 
GCTGAGCTGGAGGATGCCCTGGGCTTCGAGGTCCTTGAGGATTTGGTTGGTGGTCTGCCGCGACAGCGACAG 
CATCAATGCCAACTGTTCCTGCGGCAGGTGCAGGACCTGCCGGCTGCGGCTGTTGTCGTAGCCCTCGGCGAG 
CATCAGCAGGCGCCGCGCCAGGCGTTGCGCGGCCGGCAGCAGGGCCATCTCTTCCAGGGCGATGAATGCCAG 
GCGCAGCTTGTGGCTCATCAGCAGGGCCATGTCGCGCCAGTAATGCGGCTCGCGGCGAAGCAGTTCGAGCAG 
CGCCGCCTGCGGTACCTGGAGTAG