ViewGene

Locus Name:
GeneID:
Location:

GeneID:7082
TrivialName: PA14_03540
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_03540
PAO1 Ortholog Locus:
Sequence Length:1296
Protein Length:431
Start: 323272
Stop: 321977
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: dbj|BAC69248.1| (AP005027) putative oxidoreductase [Streptomyces avermitilis MA-4680]
Identities = 143/458 (31%), Positives = 164/458 (35%), Gaps = 91/458 (19%)
Sequence:
ATGGTGCTCCCGAAAGGAGATCGCCATGCCCACTGCCAACCCACCCGGCCGCACCCTCTGGCTGATGGCCGC
CATCGTCCTGGTCGGCCTCAACCTGCGGCCCTCCATGGCCGCCGTCGGCCCACTGCTGAACGCCATGCGCGG
CGAGATCGCGCTCAGCTTCGGCGACGTCTCGCTGCTGACCGCCCTGCCGGTGCTGACCCTCGGCCTCGGCAT
GTTCTTCGGTCTGAGCATCGCCCGCCGCGTCGGCGAGTGGCGTTCGGTGGCCCTCGCCCTGCTGCTGATCGG
CGCCGCCAGCGCCCTGCGCCTGGGCAGCCGAGGCCTGCCCGACCTGCTCGGCAGCGCCATGCTCGCCGGCCT
CGGCATCGCCCTGATCCAGGCGCTGATGCCGGCCCTGATCAAGGCCCGTTTCGGCGCGCGCACGCCGCTCTG
CATGGGGCTCTACGTCACCGCCATCATGGCTGGCGCGGCGCTGTCCGCCAGCGCTGCGCCGACCCTGGCGGA
GCACGCCGGCTGGCGGCTCGGCCTCGGTGCCTGGGCGGCGCTCGCCGCGCTCGCGCTGCTGGCCTGGTGGCT
GCAACCCGGCACCCGCCTGCGCCTGCCCGACGCGCAGCCGGGCAGGAGCCTCCTGCGCTATCCGCGGACCTG
GCTGCTGATCCTGTTCTTCGGCCTCGGCACGGCCTGCTACACCTGCGTGCTGGCCTGGCTCGCGCCCTATTA
CCTGGAACAGGGCTGGAGCGCCCAGGAATCCGGGCTGCTGCTCGGTTTCCTGACGGCCGTGGAGGTACTCTC
CGGGTTGCTCGCGCCGGCCCTGGCCAGCCGCTCGCGGGATCGCCGCCCGGTGCTGGTCGGGCTAACCGCGCT
GATGCTGGCCGGCTTCCTCGGCCTCGCCTGGGCGCCGGCCAGCCTGCCGCTGCTCTGGGCGCTGTGCCTCGG
ACTGGGCATCGGCGGGCTGTTCCCCATGGGCTTGATCGTCTGTCTCGACCACTTCGACGCGCCGCAACGCGC
CGGTCAACTGGCTGCCCTGGTACAAGGCGCCGGCTACCTGATCGCCGGGGTCTCGCCATGGATCGCCGGGCT
GCTGCGCGACAGCCTCGGCAGCTTCACCGGCGCCTGGCTCGGGCTGACCACGGTGGCGGCGCTGCTACTGGG
GCTGGGCCTGCGCTTCGACCCGCGGCGCTATGCGGCACTGTTCGCCGAGCGACAGCCGCAAGGCGTCGGCGC
CGAAAGCTTGCGCTGAGGAAAGGGACGGGTTCTGATGGCGCTCCCGACGCCGTCAGGACGCCCCGATGCTGA
Translation:
MVLPKGDRHAHCQPTRPHPLADGRHRPGRPQPAALHGRRRPTAERHARRDRAQLRRRLAADRPAGADPRPRH
VLRSEHRPPRRRVAFGGPRPAADRRRQRPAPGQPRPARPARQRHARRPRHRPDPGADAGPDQGPFRRAHAAL
HGALRHRHHGWRGAVRQRCADPGGARRLAARPRCLGGARRARAAGLVAATRHPPAPARRAAGQEPPALSADL
AADPVLRPRHGLLHLRAGLARALLPGTGLERPGIRAAARFPDGRGGTLRVARAGPGQPLAGSPPGAGRANRA
DAGRLPRPRLGAGQPAAALGAVPRTGHRRAVPHGLDRLSRPLRRAATRRSTGCPGTRRRLPDRRGLAMDRRA
AARQPRQLHRRLARADHGGGAATGAGPALRPAALCGTVRRATAARRRRRKLALRKGTGSDGAPDAVRTPRC*
AnnotationID:7082GeneID:7082
AnnotatorUID: diggins
Modification Date/Time: 2005-03-24 05:05:08
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:13828
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31237
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50084How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6124613Stop: 6123318
Length: 1296
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGTGCTCCCGAAAGGAGATCGCCATGCCCACTGCCAACCCACCCGGCCGCACCCTCTGGCTGATGGCCGC
CATCGTCCTGGTCGGCCTCAACCTGCGGCCCTCCATGGCCGCCGTCGGCCCACTGCTGAACGCCATGCGCGG
CGAGATCGCGCTCAGCTTCGGCGACGTCTCGCTGCTGACCGCCCTGCCGGTGCTGACCCTCGGCCTCGGCAT
GTTCTTCGGTCTGAGCATCGCCCGCCGCGTCGGCGAGTGGCGTTCGGTGGCCCTCGCCCTGCTGCTGATCGG
CGCCGCCAGCGCCCTGCGCCTGGGCAGCCGAGGCCTGCCCGACCTGCTCGGCAGCGCCATGCTCGCCGGCCT
CGGCATCGCCCTGATCCAGGCGCTGATGCCGGCCCTGATCAAGGCCCGTTTCGGCGCGCGCACGCCGCTCTG
CATGGGGCTCTACGTCACCGCCATCATGGCTGGCGCGGCGCTGTCCGCCAGCGCTGCGCCGACCCTGGCGGA
GCACGCCGGCTGGCGGCTCGGCCTCGGTGCCTGGGCGGCGCTCGCCGCGCTCGCGCTGCTGGCCTGGTGGCT
GCAACCCGGCACCCGCCTGCGCCTGCCCGACGCGCAGCCGGGCAGGAGCCTCCTGCGCTATCCGCGGACCTG
GCTGCTGATCCTGTTCTTCGGCCTCGGCACGGCCTGCTACACCTGCGTGCTGGCCTGGCTCGCGCCCTATTA
CCTGGAACAGGGCTGGAGCGCCCAGGAATCCGGGCTGCTGCTCGGTTTCCTGACGGCCGTGGAGGTACTCTC
CGGGTTGCTCGCGCCGGCCCTGGCCAGCCGCTCGCGGGATCGCCGCCCGGTGCTGGTCGGGCTAACCGCGCT
GATGCTGGCCGGCTTCCTCGGCCTCGCCTGGGCGCCGGCCAGCCTGCCGCTGCTCTGGGCGCTGTGCCTCGG
ACTGGGCATCGGCGGGCTGTTCCCCATGGGCTTGATCGTCTGTCTCGACCACTTCGACGCGCCGCAACGCGC
CGGTCAACTGGCTGCCCTGGTACAAGGCGCCGGCTACCTGATCGCCGGGGTCTCGCCATGGATCGCCGGGCT
GCTGCGCGACAGCCTCGGCAGCTTCACCGGCGCCTGGCTCGGGCTGACCACGGTGGCGGCGCTGCTACTGGG
GCTGGGCCTGCGCTTCGACCCGCGGCGCTATGCGGCACTGTTCGCCGAGCGACAGCCGCAAGGCGTCGGCGC
CGAAAGCTTGCGCTGAGGAAAGGGACGGGTTCTGATGGCGCTCCCGACGCCGTCAGGACGCCCCGATGCTGA