ViewGene

Locus Name:
GeneID:
Location:

GeneID:7063
TrivialName: PA14_03140
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_03140
PAO1 Ortholog Locus:
Sequence Length:1641
Protein Length:546
Start: 274757
Stop: 276397
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK53449.1| (AY032926) unknown [Streptomyces aureofaciens]
Identities = 153/555 (27%), Positives = 193/555 (34%), Gaps = 117/555 (21%)
Sequence:
GTGCAGCGGATGCGCGCGGGTCGCCAGCGCCCATACCACCTGGTCGATCTCGGTGACGTCGATGTCGTTGCC
GACCAGGATCAGCTTCGGCACCAGGTGCCCGGCATGCGAGCCGAAGACGGTCTCGGCGACCCGTGCGGCGAA
GGCCGCGGCGTCGGTGCCCAGGGCCGCCAGGCGCTGCACGTCGATCGACAGCACGGCCCAGCAGGTCGCCGC
CTCGTAGGAGCACCAGGCCATGTCCACCGGCAGTCCGGCGTTCTGCGCCACGTCCAGCAGTTGCGCGGAAAT
CATGGTGCCCCAGATGGTGTGGTTTTCCTCCGGTGGCGTGCCGGCGACGCAGATCGGCAGGATCGGCTGGTC
GCGGAAGCTCAGCGCATGGACGTGGAACAGCGGCTGCGGCTTGCCGGTGGGGAAGGAATAGCCGTGGTATTC
GCCCATCGGGCCTTCCAGTGCGGTTTCGTCGAGGCTGATCTCGCCCTCCAGGACGATCTCGGCATTGGCCGG
AACCCACAGGCCGTTGGTCTGCGTGCGCACCACCTCCACCGGCTCGCCGACCAGGGCGCCTACGTAGCCGGC
TTCGCTGACCCCCTCCGGCAACGGCATACCGGCCGCCGCGAGTGCCGCCGGCGGTGCGCCGAGGGCCATCGC
CCAGGGCGTTGGCTTGCCCTGGCGGCGCCACTGCTCGCGGATGATGCCGATGTGCTGGGTGGGAATGGTCGG
ACCCGCCAGGGTGTTGCGGTCCACCAGCATCAGCCGGCCCACCGACCAGCTGTCCCAACTGCCGTCCGGCGT
CTGTACCACGTGGAAACCGTAGGTGCCGAAATAGCGGCCGCCGTCCTGCTCATGGAGCAAGGGGACCGGGAA
GCGGGTCAGGTCCACCTGCTCGCCGAGCCAGACGTTTTCCTGCACCGGCCCGCGCTCCAGCCGGCGCGGCGC
GATCGGTTCCGCGCGCATCGCGGCGCGCAGCGTGGCCACGATGTCCCGTGGCCCGCTGTGTTCCGGCAGGCC
GAAATGCAGCGCCAGGCGCGAATGGGCGCGGGCCCTGTCGGCGCGCAGGCCGGCCGGCGCGCCCAGTACCCG
CGCGCCGGGCAGGCTGTCGCGGATGTTGTGGAACAGCGGGGCGGGTGCGCGGCGTTCGTAGACCCGGCGGGT
GATGGCGCCGATCTCCAGGTTGGCGTCGACCTCGGTGTGCACGTCCACCAGGTCACCCTGGCGACGCAGGTG
GTCGATGAAGTGGCGGAAATCCAGGGCGCTGCGGTTCATCGGCTCGCCACTCCATATAAGTGCGTGTGCACG
CATCCTATTGAATGGTTCCAGGCGAGGTCAAGAAGTGCTGCGCTCCGTTCCGGGGATTCGTCGGGCCGTCGT
GGCACGCGGCAAACCCCGCAGTGGCCGCTCAACGCACCATATAGTCCATCTGCCATGGCCGCGGAATCACCA
GTGCCAGCAACGCGAGAAGAGCCGCCAGCGCTGCGCTCGCCGCCATCGCCGCGAGGCCCAGTTGCTGTTCCA
GTAGGGCGCCGAGCACCGCGCCGACGCACATGCCGCTCCAGGGCACCAGTTGCACCCGCCAGCCGTTGCGCC
GCTCGCCCAGCAGCCAGCGGCCGAGGCCGCGGCCGAAGCGGGAGAGGGCGCCGGTGA
Translation:
MQRMRAGRQRPYHLVDLGDVDVVADQDQLRHQVPGMRAEDGLGDPCGEGRGVGAQGRQALHVDRQHGPAGRR
LVGAPGHVHRQSGVLRHVQQLRGNHGAPDGVVFLRWRAGDADRQDRLVAEAQRMDVEQRLRLAGGEGIAVVF
AHRAFQCGFVEADLALQDDLGIGRNPQAVGLRAHHLHRLADQGAYVAGFADPLRQRHTGRRECRRRCAEGHR
PGRWLALAAPLLADDADVLGGNGRTRQGVAVHQHQPAHRPAVPTAVRRLYHVETVGAEIAAAVLLMEQGDRE
AGQVHLLAEPDVFLHRPALQPARRDRFRAHRGAQRGHDVPWPAVFRQAEMQRQARMGAGPVGAQAGRRAQYP
RAGQAVADVVEQRGGCAAFVDPAGDGADLQVGVDLGVHVHQVTLATQVVDEVAEIQGAAVHRLATPYKCVCT
HPIEWFQARSRSAALRSGDSSGRRGTRQTPQWPLNAPYSPSAMAAESPVPATREEPPALRSPPSPRGPVAVP
VGRRAPRRRTCRSRAPVAPASRCAARPAASGRGRGRSGRGRR*
AnnotationID:7063GeneID:7063
AnnotatorUID: diggins
Modification Date/Time: 2005-03-24 05:05:26
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16793
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31200
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50065How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6076098Stop: 6077738
Length: 1641
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCAGCGGATGCGCGCGGGTCGCCAGCGCCCATACCACCTGGTCGATCTCGGTGACGTCGATGTCGTTGCC
GACCAGGATCAGCTTCGGCACCAGGTGCCCGGCATGCGAGCCGAAGACGGTCTCGGCGACCCGTGCGGCGAA
GGCCGCGGCGTCGGTGCCCAGGGCCGCCAGGCGCTGCACGTCGATCGACAGCACGGCCCAGCAGGTCGCCGC
CTCGTAGGAGCACCAGGCCATGTCCACCGGCAGTCCGGCGTTCTGCGCCACGTCCAGCAGTTGCGCGGAAAT
CATGGTGCCCCAGATGGTGTGGTTTTCCTCCGGTGGCGTGCCGGCGACGCAGATCGGCAGGATCGGCTGGTC
GCGGAAGCTCAGCGCATGGACGTGGAACAGCGGCTGCGGCTTGCCGGTGGGGAAGGAATAGCCGTGGTATTC
GCCCATCGGGCCTTCCAGTGCGGTTTCGTCGAGGCTGATCTCGCCCTCCAGGACGATCTCGGCATTGGCCGG
AACCCACAGGCCGTTGGTCTGCGTGCGCACCACCTCCACCGGCTCGCCGACCAGGGCGCCTACGTAGCCGGC
TTCGCTGACCCCCTCCGGCAACGGCATACCGGCCGCCGCGAGTGCCGCCGGCGGTGCGCCGAGGGCCATCGC
CCAGGGCGTTGGCTTGCCCTGGCGGCGCCACTGCTCGCGGATGATGCCGATGTGCTGGGTGGGAATGGTCGG
ACCCGCCAGGGTGTTGCGGTCCACCAGCATCAGCCGGCCCACCGACCAGCTGTCCCAACTGCCGTCCGGCGT
CTGTACCACGTGGAAACCGTAGGTGCCGAAATAGCGGCCGCCGTCCTGCTCATGGAGCAAGGGGACCGGGAA
GCGGGTCAGGTCCACCTGCTCGCCGAGCCAGACGTTTTCCTGCACCGGCCCGCGCTCCAGCCGGCGCGGCGC
GATCGGTTCCGCGCGCATCGCGGCGCGCAGCGTGGCCACGATGTCCCGTGGCCCGCTGTGTTCCGGCAGGCC
GAAATGCAGCGCCAGGCGCGAATGGGCGCGGGCCCTGTCGGCGCGCAGGCCGGCCGGCGCGCCCAGTACCCG
CGCGCCGGGCAGGCTGTCGCGGATGTTGTGGAACAGCGGGGCGGGTGCGCGGCGTTCGTAGACCCGGCGGGT
GATGGCGCCGATCTCCAGGTTGGCGTCGACCTCGGTGTGCACGTCCACCAGGTCACCCTGGCGACGCAGGTG
GTCGATGAAGTGGCGGAAATCCAGGGCGCTGCGGTTCATCGGCTCGCCACTCCATATAAGTGCGTGTGCACG
CATCCTATTGAATGGTTCCAGGCGAGGTCAAGAAGTGCTGCGCTCCGTTCCGGGGATTCGTCGGGCCGTCGT
GGCACGCGGCAAACCCCGCAGTGGCCGCTCAACGCACCATATAGTCCATCTGCCATGGCCGCGGAATCACCA
GTGCCAGCAACGCGAGAAGAGCCGCCAGCGCTGCGCTCGCCGCCATCGCCGCGAGGCCCAGTTGCTGTTCCA
GTAGGGCGCCGAGCACCGCGCCGACGCACATGCCGCTCCAGGGCACCAGTTGCACCCGCCAGCCGTTGCGCC
GCTCGCCCAGCAGCCAGCGGCCGAGGCCGCGGCCGAAGCGGGAGAGGGCGCCGGTGA