ViewGene

Locus Name:
GeneID:
Location:

GeneID:7057
TrivialName: PA14_02860
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_02860
PAO1 Ortholog Locus:
Sequence Length:1026
Protein Length:341
Start: 253667
Stop: 252642
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCCGAAACGGCATCAGCGAACGAGCAAGCTCGGGCAAGCCGTCTGGCATCGGCGCGAGCGCCGCTCAGGC
CTCGTTCAGGCGCGCTTCCTCGCGCTCGCGCAGGCGCACTTCCTCGGCGATCTGCCGGGCCAGGGCGTCCAC
CGCCACCGGCAGGTAGCGGCCGGTACGCACGTAGAGGCCGAGGTCGCTGTGGATGCCGCCATTGTCTTTCAG
CGGCAGGAAGCGCAACTCGCCCTGGGCGATGTCGGCCTCGATCCCCAGGCGGGTCTGGAAGGCGACGCCGAG
CCCGCGCCGCGCCAGTTGTCGCGACAGCTCCAGGGAGCTGCTCTCCAGCACCGCCCGGCGCGGTTCGCGCAA
ACGGCGCTGGAGCGGCGCCAGCAGGTGATGGATGGACAGCTCGCTCTTGGCCATGATCAGGCCATGTTCGAC
GCAATCGGCGAAGGCGATGGCCTGGTGTCGCGCCAACGGGTGCTGCGGGGAGACGATGGCACCGAGGCGGAA
ATGGCCGACGCTGACCTGTTGCAGGTCGGCGCTGCGCGGCAGGGCGAAGGCCAGGCCGAGGTCGACCGCGCC
GCTGCTCACCGCCTCGGGTATCGCCTGGGAACCGAGCAGGGTGACGCCGACGGTGATGTCCGGGTAGCGTTC
GCGCATCGCCTTGAGCACGCAGGGCAGCAGGTCGCTGGTCACCGCCTCGATGGTGGCGATCTCCACATGGCC
GGTGCGCAGGCCTTGCAGCGCGTCCAGTTCGGAACGCACGCGCTCCATGTCCTGCAGGACCACGGTGACGTG
GCGCGCGAAGATCTCCCCGGCTCCGGTCAGGCGCAGGCCCCCGGGCAGGCGGTCGAACAGCGGCGCGCCGAT
CTCGTCCTCCAGCTTGAGGATCTGCCGGTTCACCGCCGACGAGGCGACGTTCAGGCGTCGCGCGGCTTCGCG
GATCGAATGGCAGCGGCGCACCATGTCGAAGTAGTGGATCGCGGGCGCGTGGATATGCAGCTTGCGGCTCAT
GGCGGACCGAaGGGATGA
Translation:
MPKRHQRTSKLGQAVWHRRERRSGLVQARFLALAQAHFLGDLPGQGVHRHRQVAAGTHVEAEVAVDAAIVFQ
RQEAQLALGDVGLDPQAGLEGDAEPAPRQLSRQLQGAALQHRPARFAQTALERRQQVMDGQLALGHDQAMFD
AIGEGDGLVSRQRVLRGDDGTEAEMADADLLQVGAARQGEGQAEVDRAAAHRLGYRLGTEQGDADGDVRVAF
AHRLEHAGQQVAGHRLDGGDLHMAGAQALQRVQFGTHALHVLQDHGDVAREDLPGSGQAQAPGQAVEQRRAD
LVLQLEDLPVHRRRGDVQASRGFADRMAAAHHVEVVDRGRVDMQLAAHGGPKG*
AnnotationID:7057GeneID:7057
AnnotatorUID: diggins
Modification Date/Time: 2005-03-23 18:06:02
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13783
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31188
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50059How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6055008Stop: 6053983
Length: 1026
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCCGAAACGGCATCAGCGAACGAGCAAGCTCGGGCAAGCCGTCTGGCATCGGCGCGAGCGCCGCTCAGGC
CTCGTTCAGGCGCGCTTCCTCGCGCTCGCGCAGGCGCACTTCCTCGGCGATCTGCCGGGCCAGGGCGTCCAC
CGCCACCGGCAGGTAGCGGCCGGTACGCACGTAGAGGCCGAGGTCGCTGTGGATGCCGCCATTGTCTTTCAG
CGGCAGGAAGCGCAACTCGCCCTGGGCGATGTCGGCCTCGATCCCCAGGCGGGTCTGGAAGGCGACGCCGAG
CCCGCGCCGCGCCAGTTGTCGCGACAGCTCCAGGGAGCTGCTCTCCAGCACCGCCCGGCGCGGTTCGCGCAA
ACGGCGCTGGAGCGGCGCCAGCAGGTGATGGATGGACAGCTCGCTCTTGGCCATGATCAGGCCATGTTCGAC
GCAATCGGCGAAGGCGATGGCCTGGTGTCGCGCCAACGGGTGCTGCGGGGAGACGATGGCACCGAGGCGGAA
ATGGCCGACGCTGACCTGTTGCAGGTCGGCGCTGCGCGGCAGGGCGAAGGCCAGGCCGAGGTCGACCGCGCC
GCTGCTCACCGCCTCGGGTATCGCCTGGGAACCGAGCAGGGTGACGCCGACGGTGATGTCCGGGTAGCGTTC
GCGCATCGCCTTGAGCACGCAGGGCAGCAGGTCGCTGGTCACCGCCTCGATGGTGGCGATCTCCACATGGCC
GGTGCGCAGGCCTTGCAGCGCGTCCAGTTCGGAACGCACGCGCTCCATGTCCTGCAGGACCACGGTGACGTG
GCGCGCGAAGATCTCCCCGGCTCCGGTCAGGCGCAGGCCCCCGGGCAGGCGGTCGAACAGCGGCGCGCCGAT
CTCGTCCTCCAGCTTGAGGATCTGCCGGTTCACCGCCGACGAGGCGACGTTCAGGCGTCGCGCGGCTTCGCG
GATCGAATGGCAGCGGCGCACCATGTCGAAGTAGTGGATCGCGGGCGCGTGGATATGCAGCTTGCGGCTCAT
GGCGGACCGAaGGGATGA