ViewGene

Locus Name:
GeneID:
Location:

GeneID:7055
TrivialName: PA14_02800
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_02800
PAO1 Ortholog Locus:
Sequence Length:1356
Protein Length:451
Start: 248583
Stop: 249938
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK53449.1| (AY032926) unknown [Streptomyces aureofaciens]
Identities = 129/446 (28%), Positives = 158/446 (35%), Gaps = 121/446 (27%)
Sequence:
ATGAAACGGACCCTGTCGAGAGAACAACAGCATGACTGCCCCGGTTCACCAGTACAGCAACGAAGAACGCCG
CAAGCGCATCTTCGCCATCGTCGGCGCCTCCTCCGGCAACCTCGTGGAATGGTTCGACTTCTACGTCTACGC
CTTCTGCGCGATCTACTTCGCACCGGCCTTCTTCCCCTCCGACAACCCCACGGTGCAGTTGCTGAACACCGC
CGGGGTCTTCGCCGCCGGCTTCCTCATGCGCCCCATCGGCGGCTGGATGTTCGGCCGCATCGCCGACAAGCA
CGGGCGCAAGACCGCCATGCTGATCTCGGTGGTGATGATGTGCGCCGGCTCCCTGGCGATCGCCTGCATGCC
CACCTACGCCAGCATCGGCACCCTGGCGCCGGCGCTGCTGTTGCTGGCGCGGATGTTCCAGGGCCTGTCGGT
GGGCGGCGAGTACGGCACCAGCGCGACCTACATGAGCGAGGTGGCGCTCAAGGGCCAGCGCGGCTTCTTCGC
CTCGTTCCAGTACGTCACCCTGATCGGCGGACAGTTGCTGGCGGTGCTGGTGGTGGTGATCCTGCAGCAGTT
GCTGAGCGAAGACGAACTGCGCGCCTGGGGCTGGCGGATTCCCTTCGTGATCGGCGCGATCACCGCGGTGAT
CGCCCTCTGGCTGCGGCGCTCGCTGAACGAGACCGCTTCGAAGTCGACCCTGGAGCGCAAGGAGTCTGGCAC
CTTCGCCGAGCTGTTCAAGCACAAGCGGGCCTTCTTCACCGTGCTCGGATTCACCGCCGGCGGCTCGCTGAT
CTTCTACACCTTCACCACCTACATGCAGAAGTACCTGGTCAACACCGCCGGGATGAGCGCCAAGACCGCCAG
CGCGGTGATGACCTTCGCCCTGCTGGCGTACATGCTGATGCAACCGCTGTTCGGCATGCTTTCCGATCGCAT
CGGGCGCAAGACCTCGATGCTCTGGTTCGGCACCCTGGGCACACTCTGCACCTTGCCGATCCTGCTCGCGCT
GAAGACCGTGAGCAGTCCCTACATGGCCTTCTTCCTGATCATCCTGGCGCTGGCCATCGTCAGCCTGTACAC
CTCCATCAGCGGCCTGATCAAGGCCGAGATGTTCCCGCCGGAGGTGCGCGCCCTCGGCGTCGGAGTGTCCTA
CGCGGTGGGCAACGCGATCTTCGGCGGCTCGGCCGAGTACGTCGCCCTGGGGCTGAAGTCGGTAGGGATGGA
GAACGTCTTCTACTGGTATGTTTCAGCCATGTGCCTGCTGGCGCTGCTGGTCTGCGTGAGCCTGCCGGATCT
GCGCAAGGTCAGCTACCTGAACGACGAGCCCTGACGGGCCGGGAAAAGGAAAACCGATGA
Translation:
MKRTLSREQQHDCPGSPVQQRRTPQAHLRHRRRLLRQPRGMVRLLRLRLLRDLLRTGLLPLRQPHGAVAEHR
RGLRRRLPHAPHRRLDVRPHRRQARAQDRHADLGGDDVRRLPGDRLHAHLRQHRHPGAGAAVAGADVPGPVG
GRRVRHQRDLHERGGAQGPARLLRLVPVRHPDRRTVAGGAGGGDPAAVAERRRTARLGLADSLRDRRDHRGD
RPLAAALAERDRFEVDPGAQGVWHLRRAVQAQAGLLHRARIHRRRLADLLHLHHLHAEVPGQHRRDERQDRQ
RGDDLRPAGVHADATAVRHAFRSHRAQDLDALVRHPGHTLHLADPARAEDREQSLHGLLPDHPGAGHRQPVH
LHQRPDQGRDVPAGGARPRRRSVLRGGQRDLRRLGRVRRPGAEVGRDGERLLLVCFSHVPAGAAGLREPAGS
AQGQLPERRALTGREKENR*
AnnotationID:7055GeneID:7055
AnnotatorUID: diggins
Modification Date/Time: 2005-03-23 13:01:03
Gene Name:
Confidence Code:3
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13780
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31184
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50057How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6049924Stop: 6051279
Length: 1356
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGAAACGGACCCTGTCGAGAGAACAACAGCATGACTGCCCCGGTTCACCAGTACAGCAACGAAGAACGCCG
CAAGCGCATCTTCGCCATCGTCGGCGCCTCCTCCGGCAACCTCGTGGAATGGTTCGACTTCTACGTCTACGC
CTTCTGCGCGATCTACTTCGCACCGGCCTTCTTCCCCTCCGACAACCCCACGGTGCAGTTGCTGAACACCGC
CGGGGTCTTCGCCGCCGGCTTCCTCATGCGCCCCATCGGCGGCTGGATGTTCGGCCGCATCGCCGACAAGCA
CGGGCGCAAGACCGCCATGCTGATCTCGGTGGTGATGATGTGCGCCGGCTCCCTGGCGATCGCCTGCATGCC
CACCTACGCCAGCATCGGCACCCTGGCGCCGGCGCTGCTGTTGCTGGCGCGGATGTTCCAGGGCCTGTCGGT
GGGCGGCGAGTACGGCACCAGCGCGACCTACATGAGCGAGGTGGCGCTCAAGGGCCAGCGCGGCTTCTTCGC
CTCGTTCCAGTACGTCACCCTGATCGGCGGACAGTTGCTGGCGGTGCTGGTGGTGGTGATCCTGCAGCAGTT
GCTGAGCGAAGACGAACTGCGCGCCTGGGGCTGGCGGATTCCCTTCGTGATCGGCGCGATCACCGCGGTGAT
CGCCCTCTGGCTGCGGCGCTCGCTGAACGAGACCGCTTCGAAGTCGACCCTGGAGCGCAAGGAGTCTGGCAC
CTTCGCCGAGCTGTTCAAGCACAAGCGGGCCTTCTTCACCGTGCTCGGATTCACCGCCGGCGGCTCGCTGAT
CTTCTACACCTTCACCACCTACATGCAGAAGTACCTGGTCAACACCGCCGGGATGAGCGCCAAGACCGCCAG
CGCGGTGATGACCTTCGCCCTGCTGGCGTACATGCTGATGCAACCGCTGTTCGGCATGCTTTCCGATCGCAT
CGGGCGCAAGACCTCGATGCTCTGGTTCGGCACCCTGGGCACACTCTGCACCTTGCCGATCCTGCTCGCGCT
GAAGACCGTGAGCAGTCCCTACATGGCCTTCTTCCTGATCATCCTGGCGCTGGCCATCGTCAGCCTGTACAC
CTCCATCAGCGGCCTGATCAAGGCCGAGATGTTCCCGCCGGAGGTGCGCGCCCTCGGCGTCGGAGTGTCCTA
CGCGGTGGGCAACGCGATCTTCGGCGGCTCGGCCGAGTACGTCGCCCTGGGGCTGAAGTCGGTAGGGATGGA
GAACGTCTTCTACTGGTATGTTTCAGCCATGTGCCTGCTGGCGCTGCTGGTCTGCGTGAGCCTGCCGGATCT
GCGCAAGGTCAGCTACCTGAACGACGAGCCCTGACGGGCCGGGAAAAGGAAAACCGATGA