ViewGene

Locus Name:
GeneID:
Location:

GeneID:7049
TrivialName: PA14_02480
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_02480
PAO1 Ortholog Locus:
Sequence Length:1452
Protein Length:483
Start: 225474
Stop: 224023
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAO22878.1| (AY204465) unknown [Myxococcus xanthus]
Identities = 51/135 (37%), Positives = 57/135 (42%), Gaps = 13/135 (9%)
Sequence:
GTGGCGATCAGCGCGCTGCCGATCGGCCCGGCCACGGTCTCCAGGCTCGCCGAGCCGGCCGCGCTGATCCCC
TTGAGCGCCTCCATGATGCCCCAGACGGTGCCGAACAGACCGATGAAGGGCGAGGTCGAGCCGATCGAGGCG
AGCACCGCCAGGCCCGACTCCAGAGAACGCCGCTCGCGCTGGATCTGCTGGCGCAGGGCGCGTTCGAGACGG
TCCTGGTGGTTGATCGACTGGGCCAGGTCGGGCTGGCCGTTGTCCTGCACCTGGATCGCGGCGAAGCCGGCC
TGGGCCACGCGGGCGCCGGCGCCCTGCTTGTCCTGCGCCTGCTCGCCAGCGGAGTCGAGGCTGGTGGCGCTC
CAGAACTGCTTCTGGAACTGGCGGTCCTGGCGCTTCTGCCGGGCGAACTGCACGCCCTTGACCAGGGCCAGG
CCCCAGGTGACCACGGAAAAGCCGACCAGCAGCCAGATGACGGCGCCTTCGACGGATTCGAGCGGGGTGGTT
AACAGACTCATGACGGATGCTCCTCGTGACGCTGCAGATTCAGTTCAACTTGAAATCGATCGGTACGCTGAC
CCAGCCGTCCTCGGCCTTGTCGCCGCGCTTGGCGGGAACGAAGGACCAGCGCTTGACCGCTTTCACCGCGGC
CTGGTCGAGGGCTTCGCGTCCGCTCGACTTCTGCACCTGGATCTCGCTCGGGCTGCCGCTGGCGAGGACATG
CACCCGCAACAGCACGGTGCCCTCCCAGCCGCGGCGCATGGCCAGGGCGGGGTATTCCGGCGCCGGGTTGTG
CAGGTAGCCGGCGTTCGCCGACGGCGGCGTCAACGGCGCCGGAGCAGCGGCCGGCGCCGGCGGGGCGGGTGG
CGCGGCGGGTTGTGGCGGCGCGGGCGGAGCCGGCTCGACGGCCTTCGGCGCCGGCTTGGGCCGGGGTTGCGG
CTTGGGCTTGGGTTTCGGCTTGGGCACCGGCTTCGGCGGCGGCGGCTTCACCGCGTTCTCGTCGACCACCGG
CGGTGGCGGTTCCTCGACCACTGGCGGCAACGGCTCGGGCGGCGGCGGTTCCACCACCGGCGGCGCCGGGGC
GGTGAACTCGATGGTCATCGGCGGCACCTGTGGCGGCACCTCGGGCAGCGCCGGGGTTCTCTGCTGGCTCAG
CCAATGGATCACCGCTCCGTGCAGGGTCAGGGCGAACAGGACCAGCAGGATCGTCTCGCGCCGGCTGAGCAC
CCGACCCTGTGCCGGGTTGTGGCGAACCAGGTGCAACGCCTGGCGAACCGGCCGACCGAGCGCCACCAGGTC
GCCGCCGGGCGTCTCGCGCCAGGGCTGCGTGCGGGCATCGACGGGCTGGGGGGTTGCCATGGAAAAGCTCCT
TGCACTGACGAACTCGATGGCCGCTCAGGTCCGTGCTGGAGTCCTAGCGGCGCAGGGAGTTGCATGATTGGC
AAGGAGGCTTAG
Translation:
MAISALPIGPATVSRLAEPAALIPLSASMMPQTVPNRPMKGEVEPIEASTARPDSRERRSRWICWRRARSRR
SWWLIDWARSGWPLSCTWIAAKPAWATRAPAPCLSCACSPAESRLVALQNCFWNWRSWRFCRANCTPLTRAR
PQVTTEKPTSSQMTAPSTDSSGVVNRLMTDAPRDAADSVQLEIDRYADPAVLGLVAALGGNEGPALDRFHRG
LVEGFASARLLHLDLARAAAGEDMHPQQHGALPAAAHGQGGVFRRRVVQVAGVRRRRRQRRRSSGRRRRGGW
RGGLWRRGRSRLDGLRRRLGPGLRLGLGFRLGHRLRRRRLHRVLVDHRRWRFLDHWRQRLGRRRFHHRRRRG
GELDGHRRHLWRHLGQRRGSLLAQPMDHRSVQGQGEQDQQDRLAPAEHPTLCRVVANQVQRLANRPTERHQV
AAGRLAPGLRAGIDGLGGCHGKAPCTDELDGRSGPCWSPSGAGSCMIGKEA*
AnnotationID:7049GeneID:7049
AnnotatorUID: diggins
Modification Date/Time: 2005-03-23 11:11:33
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:16773
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31172
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50051How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6026815Stop: 6025364
Length: 1452
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGCGATCAGCGCGCTGCCGATCGGCCCGGCCACGGTCTCCAGGCTCGCCGAGCCGGCCGCGCTGATCCCC
TTGAGCGCCTCCATGATGCCCCAGACGGTGCCGAACAGACCGATGAAGGGCGAGGTCGAGCCGATCGAGGCG
AGCACCGCCAGGCCCGACTCCAGAGAACGCCGCTCGCGCTGGATCTGCTGGCGCAGGGCGCGTTCGAGACGG
TCCTGGTGGTTGATCGACTGGGCCAGGTCGGGCTGGCCGTTGTCCTGCACCTGGATCGCGGCGAAGCCGGCC
TGGGCCACGCGGGCGCCGGCGCCCTGCTTGTCCTGCGCCTGCTCGCCAGCGGAGTCGAGGCTGGTGGCGCTC
CAGAACTGCTTCTGGAACTGGCGGTCCTGGCGCTTCTGCCGGGCGAACTGCACGCCCTTGACCAGGGCCAGG
CCCCAGGTGACCACGGAAAAGCCGACCAGCAGCCAGATGACGGCGCCTTCGACGGATTCGAGCGGGGTGGTT
AACAGACTCATGACGGATGCTCCTCGTGACGCTGCAGATTCAGTTCAACTTGAAATCGATCGGTACGCTGAC
CCAGCCGTCCTCGGCCTTGTCGCCGCGCTTGGCGGGAACGAAGGACCAGCGCTTGACCGCTTTCACCGCGGC
CTGGTCGAGGGCTTCGCGTCCGCTCGACTTCTGCACCTGGATCTCGCTCGGGCTGCCGCTGGCGAGGACATG
CACCCGCAACAGCACGGTGCCCTCCCAGCCGCGGCGCATGGCCAGGGCGGGGTATTCCGGCGCCGGGTTGTG
CAGGTAGCCGGCGTTCGCCGACGGCGGCGTCAACGGCGCCGGAGCAGCGGCCGGCGCCGGCGGGGCGGGTGG
CGCGGCGGGTTGTGGCGGCGCGGGCGGAGCCGGCTCGACGGCCTTCGGCGCCGGCTTGGGCCGGGGTTGCGG
CTTGGGCTTGGGTTTCGGCTTGGGCACCGGCTTCGGCGGCGGCGGCTTCACCGCGTTCTCGTCGACCACCGG
CGGTGGCGGTTCCTCGACCACTGGCGGCAACGGCTCGGGCGGCGGCGGTTCCACCACCGGCGGCGCCGGGGC
GGTGAACTCGATGGTCATCGGCGGCACCTGTGGCGGCACCTCGGGCAGCGCCGGGGTTCTCTGCTGGCTCAG
CCAATGGATCACCGCTCCGTGCAGGGTCAGGGCGAACAGGACCAGCAGGATCGTCTCGCGCCGGCTGAGCAC
CCGACCCTGTGCCGGGTTGTGGCGAACCAGGTGCAACGCCTGGCGAACCGGCCGACCGAGCGCCACCAGGTC
GCCGCCGGGCGTCTCGCGCCAGGGCTGCGTGCGGGCATCGACGGGCTGGGGGGTTGCCATGGAAAAGCTCCT
TGCACTGACGAACTCGATGGCCGCTCAGGTCCGTGCTGGAGTCCTAGCGGCGCAGGGAGTTGCATGATTGGC
AAGGAGGCTTAG