ViewGene

Locus Name:
GeneID:
Location:

GeneID:7046
TrivialName: PA14_02400
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_02400
PAO1 Ortholog Locus:
Sequence Length:2637
Protein Length:878
Start: 218292
Stop: 215656
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 241/900 (26%), Positives = 329/900 (36%), Gaps = 180/900 (20%)
Sequence:
GTGGGTGAAGGCTCAGAAGTCGTAGCGCAGCGATACGCCGAGCGTGCGCGGCTGTCCCACCGATGCGGTGTA
GGAGCCGTTGATGCTGGCGAAGGCGCTCAGGTAGTAGTCCTTGTCGAAGGCGTTCTTCAGCCATACCGAGGT
GTCCAGTTGGCCGTCGCCGAGATCGCTGCGCAGGCCGGCGGCGAGGTTCACCAGGGCGTAGCCGTCGATCTT
CGAAAGGTCGGAGTTGTCCAGCGTGCCCTCGGCCGCGGAGCGGTAGGCGTAGCTGGCGCTGACGTAGGGTTG
GAAGCGGTCGTCGAGGCGCCACTGGTATTCGCCATTGAGGTTGGCGATCCATTTCGAGGCGCCGACCACGCG
CTGCCCGCTGAGGTCGCAACTGCTCGGCGCGCCGGGCCGGGTGCTGACTTCCGCAGGGCACGGGGCATCCTT
GAACGACAGGTAGGTGACGTCGTTGTAAGAGCCGTTGAAGTTCAGGGTCAGGCCGCGCAACGGCAGCGCGGT
GGCCTCGAATTCCAGGCCGCGCGAGCGCACGCTGCCGGCGTTGGCCAGCACCTGCACCAACTGCGTCGAGCC
CGGCGCCTGGTACAGGGTGGTGGCCTGGTAGCCGTGGATGCCGGTCCAGAACAGGTTGGCGTTGAGCAGCAG
GCGCCGGTCGAAGAGCGTGCTCTTCAGGCCCAGCTCGGCGTCGTTGGCGCGCTCCGGTCCGACCAGCAGCGA
ATCGGCGCCGGCGCTCGGCGCGCTGCCCACCGCCAGGTTGACCCCGCCGGACTTCTCGCCGTGGGACAGGCT
GGCGTAGCCGAGCAGGTCGTCGCTGAACTGGTAGCTGAGGCTGAGCAACGCCGAAGGGGCGAAGTTGTACTG
GCTGAGATCGCCGGAATCGTAGGCACCGAGCTGGCCGTTGCGCACCGCCGCGCCGACCCCGCCGACCGCCGC
GCCGCCCAGCGGAGCGAAGCGCTCGACCTTGGCGTTCTTCTCCTCGTAGGTACCGCGCAGGCCGGCGGTGAA
GTCCAGGCGTTCGCTGAGGTGCCAGGTGCCCTGGGCGAACAGCGCGAAGCTGTCGGTCTCGATCTTGCCGTT
GGCCTTCGAGTAGGTGTCGTTCAGTGCGCCGAGATTGGCGCCGAGCAGGTACAGGTCGGCCAACGGTCCGTA
GGAGGTGAAGGTCTTGTTGCCGAGGTTCTGCCTGAACGCGTAGGCGCCCACCACGTAGTCGAAGGCACCGCC
GGTGGGCGAGGCCAGGCGGATCTCCTGGGAGAACTGCCGGTCGTGCACTTCCACCCCGGTGTCGTTGATCGC
CGAGACGTTCAGTTGCTCGTCGTTGGCCGGGGTGAAGTGCCAGTAGCGGTAGGCGCTGATGGAGGTCAGGCG
GTAGCCGCCGGCGAGGTTCCAGTTGGCCTCCAGCGAGCTGCCGCCCTGGTGCACGCTGACGTGCTGGCGGCC
GTTGATGTTGACCTTCTTGCGCTGCGGATCGCGCAACGGCGAAGCGCCGACCAGCGCGGCGCGCTGCCAGAA
ACGCTCGGCGGCGCCGTAGACCACCATGCTGCCGTTGCTCGAATCCTCCTCGTTGTAGTCGGCGATCCAGCG
CAGGCTGAAGTCCTCGTTCGGCTCGAACAGCAATTGCCCGCGCGCGCCCTGGCGCTCGCCGCCGTTGAGATA
GTTGTCGTCGTGGATGTTCTTGATGTAGCCGTCGTCGCGGGTGCGATAGGCCGAGAGGCGTCCGGCGAGGGT
TTCGCCGAGCGGCCCGGAAACCGTGCCGCGGCCCTGGAAGTAGCCGTCCTGCCCGCCGGAGACCTCGACGGT
GCGCTCGGTAGTGAAGGTCGGCGCGCGGGTGCTGATGTTCAGCACCCCGGCGGTGGTGTTCTTGCCGAACAG
GGTGCCCTGCGGACCGCGCAGCAGCTCCAGTTGCTCGATGTCCAGCAGGTCGAACACGGCCATTCCCGGCCG
CCCCAGGTAGACGTTGTCGAGGTAGATCCCGGCGCTGCCTTCCAGGCCGTCGCTGGCGGGGTTGTTGCCGAT
GCCGCGCACGGCGACGCTCGACTGCCGCGCATGGATGTAGGCGACATTGACGCTGGGCAGCACCTGCTGCAG
GTCCTGCACCCGGGAGATGCGCTGGGCCTCGAGAGTCTCGCCACCGAGCACGGTGATCGGCGTCGGTACCTT
CTGCGAATCCTCCTCGCGGCGACGCGCGGTGACGGTAACCTTGCCCAGGGCCGTATCGGCCTTGGCCGGTGC
GCTGCCGGCCAGCGGCGGCGCCTCCTCGGCGGGCGCGGGAGCATCGGCGGCACTGGCCGGCAACGCACCGCC
GAGGGCGAGCAGCAGGGCCAGGGCGTAGTCGGAGCCGCCGGGCGGCGTTCGGCGGAGCGGCAAGCGGTAGTG
ATACTTCATCGTGAATGTCCTCGGTTCCGGCACAGCCGGACGCAGGCAGCAGGCGGCCATGCCGCGCAAGGC
AGCGATCTGGCGAAAGGTTCGAAGGGGGGCCGGCGGACGGCTCAGCCCCGGGCGACTGTCAGGGACGACAGC
CGCCGGCGACGCGGAAGGGCATTCGGAACGGCGGAGGTGGCGCGGCAAAGGCACGGTGGACCATGTTCAGCT
CCTGGGGTCTATCTATGCTTATTACTAAATCGCATATTTTTCTAA
Translation:
MGEGSEVVAQRYAERARLSHRCGVGAVDAGEGAQVVVLVEGVLQPYRGVQLAVAEIAAQAGGEVHQGVAVDL
RKVGVVQRALGRGAVGVAGADVGLEAVVEAPLVFAIEVGDPFRGADHALPAEVATARRAGPGADFRRARGIL
ERQVGDVVVRAVEVQGQAAQRQRGGLEFQAARAHAAGVGQHLHQLRRARRLVQGGGLVAVDAGPEQVGVEQQ
APVEERALQAQLGVVGALRSDQQRIGAGARRAAHRQVDPAGLLAVGQAGVAEQVVAELVAEAEQRRRGEVVL
AEIAGIVGTELAVAHRRADPADRRAAQRSEALDLGVLLLVGTAQAGGEVQAFAEVPGALGEQREAVGLDLAV
GLRVGVVQCAEIGAEQVQVGQRSVGGEGLVAEVLPERVGAHHVVEGTAGGRGQADLLGELPVVHFHPGVVDR
RDVQLLVVGRGEVPVAVGADGGQAVAAGEVPVGLQRAAALVHADVLAAVDVDLLALRIAQRRSADQRGALPE
TLGGAVDHHAAVARILLVVVGDPAQAEVLVRLEQQLPARALALAAVEIVVVVDVLDVAVVAGAIGREASGEG
FAERPGNRAAALEVAVLPAGDLDGALGSEGRRAGADVQHPGGGVLAEQGALRTAQQLQLLDVQQVEHGHSRP
PQVDVVEVDPGAAFQAVAGGVVADAAHGDARLPRMDVGDIDAGQHLLQVLHPGDALGLESLATEHGDRRRYL
LRILLAATRGDGNLAQGRIGLGRCAAGQRRRLLGGRGSIGGTGRQRTAEGEQQGQGVVGAAGRRSAERQAVV
ILHRECPRFRHSRTQAAGGHAAQGSDLAKGSKGGRRTAQPRATVRDDSRRRRGRAFGTAEVARQRHGGPCSA
PGVYLCLLLNRIFF*
AnnotationID:7046GeneID:7046
AnnotatorUID: diggins
Modification Date/Time: 2005-03-23 09:09:59
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16769
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31166
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50048How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6019631Stop: 6016995
Length: 2637
Start Codon: GTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGGTGAAGGCTCAGAAGTCGTAGCGCAGCGATACGCCGAGCGTGCGCGGCTGTCCCACCGATGCGGTGTA
GGAGCCGTTGATGCTGGCGAAGGCGCTCAGGTAGTAGTCCTTGTCGAAGGCGTTCTTCAGCCATACCGAGGT
GTCCAGTTGGCCGTCGCCGAGATCGCTGCGCAGGCCGGCGGCGAGGTTCACCAGGGCGTAGCCGTCGATCTT
CGAAAGGTCGGAGTTGTCCAGCGTGCCCTCGGCCGCGGAGCGGTAGGCGTAGCTGGCGCTGACGTAGGGTTG
GAAGCGGTCGTCGAGGCGCCACTGGTATTCGCCATTGAGGTTGGCGATCCATTTCGAGGCGCCGACCACGCG
CTGCCCGCTGAGGTCGCAACTGCTCGGCGCGCCGGGCCGGGTGCTGACTTCCGCAGGGCACGGGGCATCCTT
GAACGACAGGTAGGTGACGTCGTTGTAAGAGCCGTTGAAGTTCAGGGTCAGGCCGCGCAACGGCAGCGCGGT
GGCCTCGAATTCCAGGCCGCGCGAGCGCACGCTGCCGGCGTTGGCCAGCACCTGCACCAACTGCGTCGAGCC
CGGCGCCTGGTACAGGGTGGTGGCCTGGTAGCCGTGGATGCCGGTCCAGAACAGGTTGGCGTTGAGCAGCAG
GCGCCGGTCGAAGAGCGTGCTCTTCAGGCCCAGCTCGGCGTCGTTGGCGCGCTCCGGTCCGACCAGCAGCGA
ATCGGCGCCGGCGCTCGGCGCGCTGCCCACCGCCAGGTTGACCCCGCCGGACTTCTCGCCGTGGGACAGGCT
GGCGTAGCCGAGCAGGTCGTCGCTGAACTGGTAGCTGAGGCTGAGCAACGCCGAAGGGGCGAAGTTGTACTG
GCTGAGATCGCCGGAATCGTAGGCACCGAGCTGGCCGTTGCGCACCGCCGCGCCGACCCCGCCGACCGCCGC
GCCGCCCAGCGGAGCGAAGCGCTCGACCTTGGCGTTCTTCTCCTCGTAGGTACCGCGCAGGCCGGCGGTGAA
GTCCAGGCGTTCGCTGAGGTGCCAGGTGCCCTGGGCGAACAGCGCGAAGCTGTCGGTCTCGATCTTGCCGTT
GGCCTTCGAGTAGGTGTCGTTCAGTGCGCCGAGATTGGCGCCGAGCAGGTACAGGTCGGCCAACGGTCCGTA
GGAGGTGAAGGTCTTGTTGCCGAGGTTCTGCCTGAACGCGTAGGCGCCCACCACGTAGTCGAAGGCACCGCC
GGTGGGCGAGGCCAGGCGGATCTCCTGGGAGAACTGCCGGTCGTGCACTTCCACCCCGGTGTCGTTGATCGC
CGAGACGTTCAGTTGCTCGTCGTTGGCCGGGGTGAAGTGCCAGTAGCGGTAGGCGCTGATGGAGGTCAGGCG
GTAGCCGCCGGCGAGGTTCCAGTTGGCCTCCAGCGAGCTGCCGCCCTGGTGCACGCTGACGTGCTGGCGGCC
GTTGATGTTGACCTTCTTGCGCTGCGGATCGCGCAACGGCGAAGCGCCGACCAGCGCGGCGCGCTGCCAGAA
ACGCTCGGCGGCGCCGTAGACCACCATGCTGCCGTTGCTCGAATCCTCCTCGTTGTAGTCGGCGATCCAGCG
CAGGCTGAAGTCCTCGTTCGGCTCGAACAGCAATTGCCCGCGCGCGCCCTGGCGCTCGCCGCCGTTGAGATA
GTTGTCGTCGTGGATGTTCTTGATGTAGCCGTCGTCGCGGGTGCGATAGGCCGAGAGGCGTCCGGCGAGGGT
TTCGCCGAGCGGCCCGGAAACCGTGCCGCGGCCCTGGAAGTAGCCGTCCTGCCCGCCGGAGACCTCGACGGT
GCGCTCGGTAGTGAAGGTCGGCGCGCGGGTGCTGATGTTCAGCACCCCGGCGGTGGTGTTCTTGCCGAACAG
GGTGCCCTGCGGACCGCGCAGCAGCTCCAGTTGCTCGATGTCCAGCAGGTCGAACACGGCCATTCCCGGCCG
CCCCAGGTAGACGTTGTCGAGGTAGATCCCGGCGCTGCCTTCCAGGCCGTCGCTGGCGGGGTTGTTGCCGAT
GCCGCGCACGGCGACGCTCGACTGCCGCGCATGGATGTAGGCGACATTGACGCTGGGCAGCACCTGCTGCAG
GTCCTGCACCCGGGAGATGCGCTGGGCCTCGAGAGTCTCGCCACCGAGCACGGTGATCGGCGTCGGTACCTT
CTGCGAATCCTCCTCGCGGCGACGCGCGGTGACGGTAACCTTGCCCAGGGCCGTATCGGCCTTGGCCGGTGC
GCTGCCGGCCAGCGGCGGCGCCTCCTCGGCGGGCGCGGGAGCATCGGCGGCACTGGCCGGCAACGCACCGCC
GAGGGCGAGCAGCAGGGCCAGGGCGTAGTCGGAGCCGCCGGGCGGCGTTCGGCGGAGCGGCAAGCGGTAGTG
ATACTTCATCGTGAATGTCCTCGGTTCCGGCACAGCCGGACGCAGGCAGCAGGCGGCCATGCCGCGCAAGGC
AGCGATCTGGCGAAAGGTTCGAAGGGGGGCCGGCGGACGGCTCAGCCCCGGGCGACTGTCAGGGACGACAGC
CGCCGGCGACGCGGAAGGGCATTCGGAACGGCGGAGGTGGCGCGGCAAAGGCACGGTGGACCATGTTCAGCT
CCTGGGGTCTATCTATGCTTATTACTAAATCGCATATTTTTCTAA