ViewGene

Locus Name:
GeneID:
Location:

GeneID: 7045

TrivialName: PA14_02350

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_02350

PAO1 Ortholog Locus:

Sequence Length: 1893

Protein Length: 630

Start: 213042

Stop: 211150

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAD47188.1| (AL766851) Unknown [Streptococcus agalactiae NEM316] Identities = 70/266 (26%), Positives = 126/266 (47%), Gaps = 6/266 (2%)

Sequence:

GTGGCGACATCAGCACCGTCTACGGACGCCTCGGCGCCTATCCGGTGCGCCTCGACGCGGTCGGCTTCCTCG
GCGGTCAATGGCAGGCCACGGAGCGGCTGCAACTGTCGCTCTACGCCTCGCGCTTCGACGACATCTGGCAGC
AGGCCTATTTCGGCGCCAGCCATCGCCAGCCGCTGGGCGGGGAGCGCGCGCTGCGGGTCGACCTCGACGCCT
ACCGCACCCGCGACAGCGGCCAGAGCCGCTTCGGCCGCATCGACACCCTGGCCAGCTCCCTGGCCCTGGGCT
ACGAACAGGGACCGCAGCGCATCACCCTGGCCTACCAGCGTGTCCACGGCGAGCAGCCGTTCGACTACATGG
CCTTCGGCGACGGGCGCTCCAGCGCATCCATGGTACTGGCCAACTCGGTGGGCTACTCCGACTTCAACGGAC
CGGGCGAGCGTTCCTGGCAATTACGCTATGACCTGGACCTCGGCGCGCTCGGCCTGCCTGGGCTCAGCCTGC
ACGCGCTGCATGCCCGCGGCCGTGCCGGGGCCAGCGCCAGCAGCGCCGCCGAGAGCATCTACGCCGGACTCT
ACGGGCGTGACGGGCGGCACCGGGAAAGCGACCTCGGCTTCGCCTACCGGGTCAAGGCGGGCCCCCTCGCCG
GCCTCGCGCTGCGCACCTCGCAGGCCTGGCACCGGGGCAACGCGAGCTATCTCGACGGCGACATCGACGAAA
CCCGGCTGGTCGTCGATTACTCCCGCTCGATCTGGTGACGCCCCGGGCCGCGGCTCGGCGTCACTCCGCCGC
CTGCGCCACGGCCTTGGCCTTCGCCAGCTTGCCGGCCGCCTCCAGCAGTTCCGGCGCGGCCCACTGCTCGGC
GCTGAATTCGCGACGGATCAGGCCGAAACGCTTGGCCGCCTGGATCGAAGCATCCAGCCGGCCAAGGAAATC
GGCGTCCAGGCGCGGCGACAGGGCGTCGCCCAGCTTGCGGCCACGGTACTCGCTCTGCAGGATCACCACCGG
GTAGCTGGCCTGCTTCGACACCAGTTCGATGTAGGCGTCGCGGTTCTCCTCGCGGGCCAGCCAGTCCTGGGC
CTGCAACTGCACCTTGAGCAGCCGCTCGGTGATGTCCGGATGGGCATCGACGAAAGCCCCGGAGCCGACCAG
CAGCGCCTGCAGGGTGCCGGCGCCGTTCAAGTCGCGGGTGCTCAGCGGAATTTCCGCGAGCCCGCGGTCGCG
CAGGGCGAACAGTCCGGCCAGGCCCCAGGTGGCATCGATCTGCCTGGCTGCGAGGGCGGACAGGGCGGCGCT
GAAATCGAGGTTGATCACCTTCAGGTCCTTCTCGCTGAGACCAACGCTGGCCAGGGCATTGTCGAACGACAA
CTGGCTGGCGGTGCCGCGGAAGATGCCTACGCGCTTGCCCTTGAGATCCTCCAGGGTCTTGATCCCGGAGCC
CGGCTGCACGCCGAGATAGTGGTTGACCCCTCGCGCGGTAGCGGCCAGCAGGCGGCTGTCCAGGCCTCCGGA
CTTGCCGATGATCGCCGCCAGGTCGCCGAGGTAGGCGAAGTCCACCTGGCCGTTGGCGAACGCTTCGTTGAC
CACCGGACCGGCGCCCTTGAAGAAGCTCCATTTCACCGCGATGCCGTCGTTGGCGAACTCCTTCTCCAGCAA
CTGCCGGGTGTAGAGCACGTCGACCACGCCGCCGCCCGAGTGCGAACTGCCGGCGCTGACGTCCGGCACCGC
GATGCGGATTTCCTTCGGCGGAGCGGCGCTCGCCAGCGGCACGTAGGCACCGAGCAGGCCGGCGAGGACAGG
CGCGGCGAACAGACCGAGCAGGGAAGACGTAAGCGCTTTCATGGGGCGGCTCCTTGGAACGGGAAGAGAGGG
ATTCCCGCCGGGAGCGGGTGA

Translation:

MATSAPSTDASAPIRCASTRSASSAVNGRPRSGCNCRSTPRASTTSGSRPISAPAIASRWAGSARCGSTSTP
TAPATAARAASAASTPWPAPWPWATNRDRSASPWPTSVSTASSRSTTWPSATGAPAHPWYWPTRWATPTSTD
RASVPGNYAMTWTSARSACLGSACTRCMPAAVPGPAPAAPPRASTPDSTGVTGGTGKATSASPTGSRRAPSP
ASRCAPRRPGTGATRAISTATSTKPGWSSITPARSGDAPGRGSASLRRLRHGLGLRQLAGRLQQFRRGPLLG
AEFATDQAETLGRLDRSIQPAKEIGVQARRQGVAQLAATVLALQDHHRVAGLLRHQFDVGVAVLLAGQPVLG
LQLHLEQPLGDVRMGIDESPGADQQRLQGAGAVQVAGAQRNFREPAVAQGEQSGQAPGGIDLPGCEGGQGGA
EIEVDHLQVLLAETNAGQGIVERQLAGGAAEDAYALALEILQGLDPGARLHAEIVVDPSRGSGQQAAVQASG
LADDRRQVAEVGEVHLAVGERFVDHRTGALEEAPFHRDAVVGELLLQQLPGVEHVDHAAARVRTAGADVRHR
DADFLRRSGARQRHVGTEQAGEDRRGEQTEQGRRKRFHGAAPWNGKRGIPAGSG*

AnnotationID:7045 GeneID:7045

AnnotatorUID: diggins

Modification Date/Time: 2004-07-30 15:03:22

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:16767

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:31164

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

ReferenceID:33546

Author/Investigator(s):

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: Misc (text/plain)

Data: 7045_cdd.html

URL:

GC ORFID: `50047`	How Found: `Glimmer`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name:	Glimmer Score:
Start: `6014381`	Stop: `6012489`
Length: `1893`
Start Codon: `GTG`	Truncated Start:
Stop Codon: `TGA`	Truncated Stop:
Homolog:	Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGCGACATCAGCACCGTCTACGGACGCCTCGGCGCCTATCCGGTGCGCCTCGACGCGGTCGGCTTCCTCG GCGGTCAATGGCAGGCCACGGAGCGGCTGCAACTGTCGCTCTACGCCTCGCGCTTCGACGACATCTGGCAGC AGGCCTATTTCGGCGCCAGCCATCGCCAGCCGCTGGGCGGGGAGCGCGCGCTGCGGGTCGACCTCGACGCCT ACCGCACCCGCGACAGCGGCCAGAGCCGCTTCGGCCGCATCGACACCCTGGCCAGCTCCCTGGCCCTGGGCT ACGAACAGGGACCGCAGCGCATCACCCTGGCCTACCAGCGTGTCCACGGCGAGCAGCCGTTCGACTACATGG CCTTCGGCGACGGGCGCTCCAGCGCATCCATGGTACTGGCCAACTCGGTGGGCTACTCCGACTTCAACGGAC CGGGCGAGCGTTCCTGGCAATTACGCTATGACCTGGACCTCGGCGCGCTCGGCCTGCCTGGGCTCAGCCTGC ACGCGCTGCATGCCCGCGGCCGTGCCGGGGCCAGCGCCAGCAGCGCCGCCGAGAGCATCTACGCCGGACTCT ACGGGCGTGACGGGCGGCACCGGGAAAGCGACCTCGGCTTCGCCTACCGGGTCAAGGCGGGCCCCCTCGCCG GCCTCGCGCTGCGCACCTCGCAGGCCTGGCACCGGGGCAACGCGAGCTATCTCGACGGCGACATCGACGAAA CCCGGCTGGTCGTCGATTACTCCCGCTCGATCTGGTGACGCCCCGGGCCGCGGCTCGGCGTCACTCCGCCGC CTGCGCCACGGCCTTGGCCTTCGCCAGCTTGCCGGCCGCCTCCAGCAGTTCCGGCGCGGCCCACTGCTCGGC GCTGAATTCGCGACGGATCAGGCCGAAACGCTTGGCCGCCTGGATCGAAGCATCCAGCCGGCCAAGGAAATC GGCGTCCAGGCGCGGCGACAGGGCGTCGCCCAGCTTGCGGCCACGGTACTCGCTCTGCAGGATCACCACCGG GTAGCTGGCCTGCTTCGACACCAGTTCGATGTAGGCGTCGCGGTTCTCCTCGCGGGCCAGCCAGTCCTGGGC CTGCAACTGCACCTTGAGCAGCCGCTCGGTGATGTCCGGATGGGCATCGACGAAAGCCCCGGAGCCGACCAG CAGCGCCTGCAGGGTGCCGGCGCCGTTCAAGTCGCGGGTGCTCAGCGGAATTTCCGCGAGCCCGCGGTCGCG CAGGGCGAACAGTCCGGCCAGGCCCCAGGTGGCATCGATCTGCCTGGCTGCGAGGGCGGACAGGGCGGCGCT GAAATCGAGGTTGATCACCTTCAGGTCCTTCTCGCTGAGACCAACGCTGGCCAGGGCATTGTCGAACGACAA CTGGCTGGCGGTGCCGCGGAAGATGCCTACGCGCTTGCCCTTGAGATCCTCCAGGGTCTTGATCCCGGAGCC CGGCTGCACGCCGAGATAGTGGTTGACCCCTCGCGCGGTAGCGGCCAGCAGGCGGCTGTCCAGGCCTCCGGA CTTGCCGATGATCGCCGCCAGGTCGCCGAGGTAGGCGAAGTCCACCTGGCCGTTGGCGAACGCTTCGTTGAC CACCGGACCGGCGCCCTTGAAGAAGCTCCATTTCACCGCGATGCCGTCGTTGGCGAACTCCTTCTCCAGCAA CTGCCGGGTGTAGAGCACGTCGACCACGCCGCCGCCCGAGTGCGAACTGCCGGCGCTGACGTCCGGCACCGC GATGCGGATTTCCTTCGGCGGAGCGGCGCTCGCCAGCGGCACGTAGGCACCGAGCAGGCCGGCGAGGACAGG CGCGGCGAACAGACCGAGCAGGGAAGACGTAAGCGCTTTCATGGGGCGGCTCCTTGGAACGGGAAGAGAGGG ATTCCCGCCGGGAGCGGGTGA