ViewGene

Locus Name:
GeneID:
Location:

GeneID:7044
TrivialName: PA14_02320
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_02320
PAO1 Ortholog Locus:
Sequence Length:1662
Protein Length:553
Start: 209370
Stop: 207709
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK53449.1| (AY032926) unknown [Streptomyces aureofaciens]
Identities = 135/488 (27%), Positives = 165/488 (33%), Gaps = 79/488 (16%)
Sequence:
ATGCTCTCGGCCAACGCATCGAAGCGCGCGCCACGCGCTGGAGACACGCATGAACGCATTCACCGCACCCGC
CACGGGCACCCCGCTGGTCAGCTTCCGCCAGGTGCGCAAGCACTTCGCCGTGGACGGCCGGCGACTGGAAGC
GATCCAGCAGTTCGACCTGGAGATCGGCGAGGGCGAGTTCATCGCCATCGTCGGCGCCAGCGGCTGCGGCAA
GTCGACCCTGCTGCGCCTGCTGATCGGCCTGGACCGCGACTACGACGGCGAGATCCGCGTCGACGGCCGGCC
AATCGCCGGCATCGGCGGCGAACGCGGCATCGTGTTCCAGGAGCACCGCCTGTTCCCCTGGCTGACGGTGCA
GCAGAACGTCGCCCTCGGCCTGGTCAACGAAGCCCTTGGCGAAACCGACAAGGCGGCGCGGATCGACGAATA
CATCCGCCTGGTCGGCCTGCACGGCTTCGAGCGTGCCTACCCGCACCAGTTGTCGGGCGGCATGGCCCAGCG
CGTGGCGATCGCCCGCGGCCTGGTGGCCAGCCCGCGCCTGCTGCTGCTCGACGAGCCGTTCAGCGCCCTCGA
CGCACTGACCCGCCAGCAGTTGCAGGAAGAGTTGCTGGCGATCCGTCGGCGCACCCGCATCACCACCCTGCT
GGTCACCCACGACGTCGAGGAGGCGCTCTACCTGGCCGACCGGGTGGTGGTGATGGAGCCGCGCCCGGGGCG
GATCAGGCGGGTGGTCGAGGTGGACCTGGCGCACCCGCGCGAGCGCGGTGGCTTCGACTTCCTGCGCCAGCG
CGAAGCGCTGCTGCACGAACTGACCGCCGACGGCGAGTACGTCGCGCCGCCGCCGCGACGGGTGGAAAACCT
GCCCTTCGAATTCCTCGCTTGCTGAAAAGCCCCTTGCCCTGGCCCTTTCCCCCTGCGGGAAGGGCGGGGGCG
acggaccCACCCTCTCCTCCCATCCAGACGAGACCCGCGCATGAGCAAACGCCCCAACTTCCTGGTGATCGT
CGCCGACGACCTGGGCTTCTCCGATATCGGCGCCTTCGGCGGCGAGATCGCCACGCCGAACCTCGACGCCCT
GGCCATCGCCGGCCTGCGCCTGACCGACTTCCACACCGCCTCGACCTGCTCGCCGACCCGCTCGATGCTGCT
CACCGGCACCGACCACCACATCGCCGGGATCGGCACCATGGCCGAGGCGCTGACCCCGGAACTGGCAGGCAA
GCCGGGTTACGAAGGGCATCTCAACGAGCGCGTGGTGGCGCTGCCGGAGCTGCTCCGCGAGGCCGGCTACCA
GACCCTCATGGCCGGCAAGTGGCACCTCGGTCTGAAGCCGGAACAGACGCCCCATGCACGCGGTTTCGAGCG
TTCCTTCTCGCTGCTGCCGGGCGCCGCCAACCACTACGGCTTCGAGCCTCCCTACGACGAAAGCACTCCGCG
CATCCTCAAGGGCACGCCGGCGCTCTACGTGGAAGACGAGCGCTACCTCGACACGCTGCCGGAGGGTTTCTA
TTCCTCCGATGCCTTCGGCGACAAGCTGCTGCACTACCTCAAGGAGCGCGACCAGAGCCGGCCGTTCTTCGC
CTACCTGCCGTTCTCCGCGCCGCACTGGCCGCTACAGGCGCCGCAGGAGATCGTCGAGAAGTACCGCGGCCG
CTATGA
Translation:
MLSANASKRAPRAGDTHERIHRTRHGHPAGQLPPGAQALRRGRPATGSDPAVRPGDRRGRVHRHRRRQRLRQ
VDPAAPADRPGPRLRRRDPRRRPANRRHRRRTRHRVPGAPPVPLADGAAERRPRPGQRSPWRNRQGGADRRI
HPPGRPARLRACLPAPVVGRHGPARGDRPRPGGQPAPAAARRAVQRPRRTDPPAVAGRVAGDPSAHPHHHPA
GHPRRRGGALPGRPGGGDGAAPGADQAGGRGGPGAPARARWLRLPAPARSAAARTDRRRRVRRAAAATGGKP
ALRIPRLLKSPLPWPFPPAGRAGATDPPSPPIQTRPAHEQTPQLPGDRRRRPGLLRYRRLRRRDRHAEPRRP
GHRRPAPDRLPHRLDLLADPLDAAHRHRPPHRRDRHHGRGADPGTGRQAGLRRASQRARGGAAGAAPRGRLP
DPHGRQVAPRSEAGTDAPCTRFRAFLLAAAGRRQPLRLRASLRRKHSAHPQGHAGALRGRRALPRHAAGGFL
FLRCLRRQAAALPQGARPEPAVLRLPAVLRAALAATGAAGDRREVPRPL*
AnnotationID:7044GeneID:7044
AnnotatorUID: diggins
Modification Date/Time: 2005-03-23 09:09:33
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:13758
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31162
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50046How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6010709Stop: 6009048
Length: 1662
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCTCTCGGCCAACGCATCGAAGCGCGCGCCACGCGCTGGAGACACGCATGAACGCATTCACCGCACCCGC
CACGGGCACCCCGCTGGTCAGCTTCCGCCAGGTGCGCAAGCACTTCGCCGTGGACGGCCGGCGACTGGAAGC
GATCCAGCAGTTCGACCTGGAGATCGGCGAGGGCGAGTTCATCGCCATCGTCGGCGCCAGCGGCTGCGGCAA
GTCGACCCTGCTGCGCCTGCTGATCGGCCTGGACCGCGACTACGACGGCGAGATCCGCGTCGACGGCCGGCC
AATCGCCGGCATCGGCGGCGAACGCGGCATCGTGTTCCAGGAGCACCGCCTGTTCCCCTGGCTGACGGTGCA
GCAGAACGTCGCCCTCGGCCTGGTCAACGAAGCCCTTGGCGAAACCGACAAGGCGGCGCGGATCGACGAATA
CATCCGCCTGGTCGGCCTGCACGGCTTCGAGCGTGCCTACCCGCACCAGTTGTCGGGCGGCATGGCCCAGCG
CGTGGCGATCGCCCGCGGCCTGGTGGCCAGCCCGCGCCTGCTGCTGCTCGACGAGCCGTTCAGCGCCCTCGA
CGCACTGACCCGCCAGCAGTTGCAGGAAGAGTTGCTGGCGATCCGTCGGCGCACCCGCATCACCACCCTGCT
GGTCACCCACGACGTCGAGGAGGCGCTCTACCTGGCCGACCGGGTGGTGGTGATGGAGCCGCGCCCGGGGCG
GATCAGGCGGGTGGTCGAGGTGGACCTGGCGCACCCGCGCGAGCGCGGTGGCTTCGACTTCCTGCGCCAGCG
CGAAGCGCTGCTGCACGAACTGACCGCCGACGGCGAGTACGTCGCGCCGCCGCCGCGACGGGTGGAAAACCT
GCCCTTCGAATTCCTCGCTTGCTGAAAAGCCCCTTGCCCTGGCCCTTTCCCCCTGCGGGAAGGGCGGGGGCG
acggaccCACCCTCTCCTCCCATCCAGACGAGACCCGCGCATGAGCAAACGCCCCAACTTCCTGGTGATCGT
CGCCGACGACCTGGGCTTCTCCGATATCGGCGCCTTCGGCGGCGAGATCGCCACGCCGAACCTCGACGCCCT
GGCCATCGCCGGCCTGCGCCTGACCGACTTCCACACCGCCTCGACCTGCTCGCCGACCCGCTCGATGCTGCT
CACCGGCACCGACCACCACATCGCCGGGATCGGCACCATGGCCGAGGCGCTGACCCCGGAACTGGCAGGCAA
GCCGGGTTACGAAGGGCATCTCAACGAGCGCGTGGTGGCGCTGCCGGAGCTGCTCCGCGAGGCCGGCTACCA
GACCCTCATGGCCGGCAAGTGGCACCTCGGTCTGAAGCCGGAACAGACGCCCCATGCACGCGGTTTCGAGCG
TTCCTTCTCGCTGCTGCCGGGCGCCGCCAACCACTACGGCTTCGAGCCTCCCTACGACGAAAGCACTCCGCG
CATCCTCAAGGGCACGCCGGCGCTCTACGTGGAAGACGAGCGCTACCTCGACACGCTGCCGGAGGGTTTCTA
TTCCTCCGATGCCTTCGGCGACAAGCTGCTGCACTACCTCAAGGAGCGCGACCAGAGCCGGCCGTTCTTCGC
CTACCTGCCGTTCTCCGCGCCGCACTGGCCGCTACAGGCGCCGCAGGAGATCGTCGAGAAGTACCGCGGCCG
CTATGA