ViewGene

Locus Name:
GeneID:
Location:

GeneID:7042
TrivialName: PA14_02240
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_02240
PAO1 Ortholog Locus:
Sequence Length:2199
Protein Length:732
Start: 200938
Stop: 203136
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 133/503 (26%), Positives = 179/503 (35%), Gaps = 93/503 (18%)
Sequence:
ATGGCGTACTCCTCGCGGCCCAGGGTGAAGGTCAGGTATTCCTGCGCCGGGCCGTTCGCCTGGCTTGCCTCA
GTGCCGTTCATCGGCGGTGTCCTCCCGCGCCGCCAGGCGTGGCAGCGCATCGACGTCGAGAATCAGGGCGAC
GCTGCCGTCGCCCATGATGGTGGCGCCGGCGATACCCTCCACGCGGCGGAAATTCTGTTCCAGGCTCTTGAT
CACCACCTGCTGCTGGCCGACCAGTTCGTCCACCTGCAGGGCGAAGCTGCGCCCCTCGGACTCGAGGATCAC
CACGATGCCCTGCTCCGGCGCCGGCGCTTCGCCGCCGATGCGCAACAGCTCGTGCAGGCTGAACAGCGGCAG
GTACTCGCCGCGTACGCGGATCATCGCGTTGTCTTCGCCGCCGAGGCCGCGCACGTCGTCGCTGCGCGCTTG
CAGCGACTCGACGATGTAGGTCAGCGGAATCACGTAGTTGACCGCTTCGACGGCGACGATCAGGCCGTCGAG
GATCGCCAGGGTCAGCGGCAGGCGGATGCCGATGCGAGTGCCCATGCCGGGCGCCGAGTCGATGTCGATGCG
CCCGCCCATGGCACCGATGTTGCGCTTCACCACGTCCATGCCGACGCCGCGTCCGGACAGCTCGGTGACCGT
CTCGGCGGTGGAGAAGCCGGGCATGAACACCAGTTGCCAGACCTCGGCGTCGCTCATCCCGTCATGCACCGG
CAGGTTGCGCTCGCGGGCCTTGGCGAGGATGCGCGGACGCGACAGGCCGCGACCGTCGTCGGAAACCTCCAC
CACCACGCTGCCGCCCTGGTGGCTGGCGGCGAGCTTCACCGTGCCGCTCGCCGGCTTGCCGGCGGCGAGGCG
TTCGGCGGGCGTTTCGATGCCGTGGTCGATGCTGTTGCGGACGATGTGGGTGAGCGGATCGCTGAGTTTCTC
GATCACGCTCTTGTCCAGTTCGGTGTGCTCGCCGTGCAGGTGCAGCTCGACCTGCTTGCCCAGGCGCGTGGC
GGTGTCGCGCACCAGCCTGGGGAAGCGGCTGAAGATGAAGTTGATCGGCAGCATGCGGATCGACATCACCGA
TTCCTGCAGGTCGCGGGTGTTGTGTTCGAGCTGGGCCAGGGCGTGCTGCAGGCGCTCGTGGCGGCTCGGGTC
GAGCTGCTCGCCGAGCTGGCCGAGCATGGCCTGGGTGATCACCAGTTCGCCGACCAGGTTGATCAGGCTGTC
GATCTTTTCCACGCTGACCCGGATCGAGCCGGACTCGCCGTCGCCACGCACCGGCGCGACTGCGCCCCTGGC
CGGCGCGGCGACGGCTTGCGCGGGCGCGCTGGGCGCGGCGGGGCTGCCGGGGGCGCCGTCGAACAGGCCGAA
GGCGCGTTCCTCCGTGGGCGGGGAGCCCGGCGCGTCATCGAAGAGGCCGAACGCTTCGCTCGCGGCCGGTGC
GCCGGGCGCCTCGTCGAAGAGCCCGAACGCTTCCGGCGCGGCCGCTCGTTCCGGAGCGCCCGGGCCTTCGTC
GAAGAAGCCGAAGGCATCGTCGTCCGCGGTTTCCCTGGCGGGCGCGTCGTCGAACAGGCCGAAGCCTTCCTC
CGCCGCTTCCTGCTCCGGCGCACGCAGCCAGCCGCGCAGCCGCTCGACCGTCTCCAGCAACGGCACCCCGGG
GTCGGGACGGCCGCTGCGATGGGCGTCGAGCAGGCGCTGCAGCACGTCGCGGGCTTCGAGGAAGGAGCTGAT
CATGTCCGGCCGCAGGTGCATCTGGCCGCAGCGGATGCGGTCGAGCAGGGTCTCCAGTTCGTGGGTGACGGC
GGTGATGTCGTCGAAACCGAACATTCCGCTGGAACCCTTGATCGAATGCGCGGCGCGGAAGATGCCGTGCAG
CGTCTCGCTGTCCGGCCGGTCCAGGTCGAGACCGATCAGGAGGAGTTCGAGGGTGGCCAGGTGTTCCTCGGT
TTCCTCGAAGAACACCTGGAGAAACTGGCTCATATCCTGGGGCATGGGACCTCCCCCGCGGGGGAACGGGAA
TCAGGGCAGGACCTTGCGCGTCACTTCGAGCAGTTTCGGCGGGTCGAACGGCTTCACCAGCCAGCCGGTGGC
GCCGGCGCTGCGTCCCTGCTGCTTCATCGCGTCGCTCGATTCGGTGGTCAGCATGAGGATCGGCACGCTGCG
GTAGCCGGCCAGGTTACGCAGGCTGCGGATCAGCGATAG
Translation:
MAYSSRPRVKVRYSCAGPFAWLASVPFIGGVLPRRQAWQRIDVENQGDAAVAHDGGAGDTLHAAEILFQALD
HHLLLADQFVHLQGEAAPLGLEDHHDALLRRRRFAADAQQLVQAEQRQVLAAYADHRVVFAAEAAHVVAARL
QRLDDVGQRNHVVDRFDGDDQAVEDRQGQRQADADASAHAGRRVDVDAPAHGTDVALHHVHADAASGQLGDR
LGGGEAGHEHQLPDLGVAHPVMHRQVALAGLGEDARTRQAATVVGNLHHHAAALVAGGELHRAARRLAGGEA
FGGRFDAVVDAVADDVGERIAEFLDHALVQFGVLAVQVQLDLLAQARGGVAHQPGEAAEDEVDRQHADRHHR
FLQVAGVVFELGQGVLQALVAARVELLAELAEHGLGDHQFADQVDQAVDLFHADPDRAGLAVATHRRDCAPG
RRGDGLRGRAGRGGAAGGAVEQAEGAFLRGRGARRVIEEAERFARGRCAGRLVEEPERFRRGRSFRSARAFV
EEAEGIVVRGFPGGRVVEQAEAFLRRFLLRRTQPAAQPLDRLQQRHPGVGTAAAMGVEQALQHVAGFEEGAD
HVRPQVHLAAADAVEQGLQFVGDGGDVVETEHSAGTLDRMRGAEDAVQRLAVRPVQVETDQEEFEGGQVFLG
FLEEHLEKLAHILGHGTSPAGERESGQDLARHFEQFRRVERLHQPAGGAGAASLLLHRVARFGGQHEDRHAA
VAGQVTQAADQR*
AnnotationID:7042GeneID:7042
AnnotatorUID: diggins
Modification Date/Time: 2005-03-23 08:08:43
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13755
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31158
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50044How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6002277Stop: 6004475
Length: 2199
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCGTACTCCTCGCGGCCCAGGGTGAAGGTCAGGTATTCCTGCGCCGGGCCGTTCGCCTGGCTTGCCTCA
GTGCCGTTCATCGGCGGTGTCCTCCCGCGCCGCCAGGCGTGGCAGCGCATCGACGTCGAGAATCAGGGCGAC
GCTGCCGTCGCCCATGATGGTGGCGCCGGCGATACCCTCCACGCGGCGGAAATTCTGTTCCAGGCTCTTGAT
CACCACCTGCTGCTGGCCGACCAGTTCGTCCACCTGCAGGGCGAAGCTGCGCCCCTCGGACTCGAGGATCAC
CACGATGCCCTGCTCCGGCGCCGGCGCTTCGCCGCCGATGCGCAACAGCTCGTGCAGGCTGAACAGCGGCAG
GTACTCGCCGCGTACGCGGATCATCGCGTTGTCTTCGCCGCCGAGGCCGCGCACGTCGTCGCTGCGCGCTTG
CAGCGACTCGACGATGTAGGTCAGCGGAATCACGTAGTTGACCGCTTCGACGGCGACGATCAGGCCGTCGAG
GATCGCCAGGGTCAGCGGCAGGCGGATGCCGATGCGAGTGCCCATGCCGGGCGCCGAGTCGATGTCGATGCG
CCCGCCCATGGCACCGATGTTGCGCTTCACCACGTCCATGCCGACGCCGCGTCCGGACAGCTCGGTGACCGT
CTCGGCGGTGGAGAAGCCGGGCATGAACACCAGTTGCCAGACCTCGGCGTCGCTCATCCCGTCATGCACCGG
CAGGTTGCGCTCGCGGGCCTTGGCGAGGATGCGCGGACGCGACAGGCCGCGACCGTCGTCGGAAACCTCCAC
CACCACGCTGCCGCCCTGGTGGCTGGCGGCGAGCTTCACCGTGCCGCTCGCCGGCTTGCCGGCGGCGAGGCG
TTCGGCGGGCGTTTCGATGCCGTGGTCGATGCTGTTGCGGACGATGTGGGTGAGCGGATCGCTGAGTTTCTC
GATCACGCTCTTGTCCAGTTCGGTGTGCTCGCCGTGCAGGTGCAGCTCGACCTGCTTGCCCAGGCGCGTGGC
GGTGTCGCGCACCAGCCTGGGGAAGCGGCTGAAGATGAAGTTGATCGGCAGCATGCGGATCGACATCACCGA
TTCCTGCAGGTCGCGGGTGTTGTGTTCGAGCTGGGCCAGGGCGTGCTGCAGGCGCTCGTGGCGGCTCGGGTC
GAGCTGCTCGCCGAGCTGGCCGAGCATGGCCTGGGTGATCACCAGTTCGCCGACCAGGTTGATCAGGCTGTC
GATCTTTTCCACGCTGACCCGGATCGAGCCGGACTCGCCGTCGCCACGCACCGGCGCGACTGCGCCCCTGGC
CGGCGCGGCGACGGCTTGCGCGGGCGCGCTGGGCGCGGCGGGGCTGCCGGGGGCGCCGTCGAACAGGCCGAA
GGCGCGTTCCTCCGTGGGCGGGGAGCCCGGCGCGTCATCGAAGAGGCCGAACGCTTCGCTCGCGGCCGGTGC
GCCGGGCGCCTCGTCGAAGAGCCCGAACGCTTCCGGCGCGGCCGCTCGTTCCGGAGCGCCCGGGCCTTCGTC
GAAGAAGCCGAAGGCATCGTCGTCCGCGGTTTCCCTGGCGGGCGCGTCGTCGAACAGGCCGAAGCCTTCCTC
CGCCGCTTCCTGCTCCGGCGCACGCAGCCAGCCGCGCAGCCGCTCGACCGTCTCCAGCAACGGCACCCCGGG
GTCGGGACGGCCGCTGCGATGGGCGTCGAGCAGGCGCTGCAGCACGTCGCGGGCTTCGAGGAAGGAGCTGAT
CATGTCCGGCCGCAGGTGCATCTGGCCGCAGCGGATGCGGTCGAGCAGGGTCTCCAGTTCGTGGGTGACGGC
GGTGATGTCGTCGAAACCGAACATTCCGCTGGAACCCTTGATCGAATGCGCGGCGCGGAAGATGCCGTGCAG
CGTCTCGCTGTCCGGCCGGTCCAGGTCGAGACCGATCAGGAGGAGTTCGAGGGTGGCCAGGTGTTCCTCGGT
TTCCTCGAAGAACACCTGGAGAAACTGGCTCATATCCTGGGGCATGGGACCTCCCCCGCGGGGGAACGGGAA
TCAGGGCAGGACCTTGCGCGTCACTTCGAGCAGTTTCGGCGGGTCGAACGGCTTCACCAGCCAGCCGGTGGC
GCCGGCGCTGCGTCCCTGCTGCTTCATCGCGTCGCTCGATTCGGTGGTCAGCATGAGGATCGGCACGCTGCG
GTAGCCGGCCAGGTTACGCAGGCTGCGGATCAGCGATAG