ViewGene

Locus Name:
GeneID:
Location:

GeneID:7041
TrivialName: PA14_02210
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_02210
PAO1 Ortholog Locus:
Sequence Length:1770
Protein Length:589
Start: 198454
Stop: 200223
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 164/590 (27%), Positives = 222/590 (37%), Gaps = 137/590 (23%)
Sequence:
GTGGTCTCAGAACTCTTCCCAGCCGTCTTCCTTGCGCGCCTTGCTGGCCCGCGCCATGCCGCTGCGGGCCAG
CGGCGCCGGCGCGCTGGGGCGTGGCGCGGACGGCCGCGCGCTGGCGAGCTGGACCACGCTCGGCGGAGTGTC
CAGCCTGAACACCGCCACCGACTGGTTGAGCAGGCCCGCCTGCTCCTGCATGGCCTCGGCGGCGGCCGCGGC
TTCCTCCACCAGCGCGGCGTTCTGCTGGGTCATGTCGTCCATCTGCGAGACCGCGCTGTTCACCTCTTCGAT
GCCGGTGCTCTGCTCGGCGGAGGCGGCGGCGATCTCCGACATGATGTCGGTGACCCGGCGGATCGCTACCAC
GATGTCGCTCATGGTCTGTCCGGCCTGGGCCACCAGGGTGTTGCCGTTCTCCACCTTGTCCACCGAGTCGGA
GATCAGCGTCTTGATCTCCTTGGCCGCGGCGGCGGAACGCTGGGCGAGGGTGCGCACTTCCCCGGCGACCAC
CGCGAAGCCGCGGCCCTGCTCGCCGGCGCGGGCTGCCTCGACCGCGGCGTTGAGGGCGAGGATGTTGGTCTG
GAAGGCGATGCCGTCGATCACCCCGATGATGTCGGCGATCTTGCGCGCCGACTCGTTGATCGAGGACATGGT
GCTGACCACCTTCTGCACCACGGTGCCGCCCTGGGTCGCCACTTCCGAGGCATTGGCCGCCAGCGAGTTGGC
CTGGCGGGCATTCTCGGCGTTGAGCTTCACCGTGCTGGTCAGTTCTTCCATGCTCGAGGCGGTTTCCTCCAG
GCTCGACGCCTGCTGCTCGGTGCGCGCCGACAGTTCGGCGTTGCCGCTGGCGATCTCGCTGGCGGCGGTGTT
GATGGTGTCGGCGGCCTCGCGAATCTGCCCGAGCATCCGCGACAGGCTCAGCGCGGTCTCGTTGGAGAAGTC
CTTGAGCTGGCCGAAGGTGCCCTGGTAGTCGGCCTCGATGCGCTGGGTGAGGTCGCCCTGGGCCAGCGCCCC
GAGCATCCGCGAGACGTCGCGCAAGCCGCGGTCGGCGGTATCCACCAGGCTGTTCAGGTCCTTCGCCAGCCT
GAGGAAGAAGCCTTCCTTGCCGGCCTCCTCGACGCGCTTGCTGAAGTCGCCGGCGGCCGCCGCCTGCACCAG
TTGCGAGACTTCCTGCTCGGCGCGGTGTTCCTCGGTGCGGTCGGTCCATTGCACGGCGGAGCCGAGGCGTTC
GTTGGCGTCGTTGAACACTGGCACCACGTCGAGGGAGAAGCGCCGGCCGCCGAGGTTGAGCTCGGCCTTGTG
CACGCCGGTGAGGTTGGCCAGCAGGTGCCGCTGGTGCGCCGGGTTCTTGTGGAACACGTCGATGTTGGCGCC
CAACAGGCGGCCGGCGTCGAAGTTCGGCAGTTGCTTGCGGATATCCGCTTCGGCGCGGCCGAGCATCTCGCT
GACGGTGCGGTTCATGTAGATGATGTTGAGGTCGTTGTCGGCGATCATCACGTTGGCCGAGACGTTGTCCAG
CGCGCTCTTGATCCGCGCGTTGTAGGCCGCCGTGGCCAGTTGCGCCGAGGTCGCCTCGGCGGCCCCGCGCAG
GCGCTCGCGAACGCCGTCGATGGCTTCGGTGATCTGCGCCTTCTTGCCCGGCAGGCGGTCCATCAGCGGCTC
GAAGTTGCCCTGGCCGTAGGCGGTGACCACGCTGACCACCTTCATCTTCACCGCGATGTGCGCGGCCACCAG
TTCGTTGACGCCCTTGGCGATGCGCGCCGCGCGGCCTTCTAG
Translation:
MVSELFPAVFLARLAGPRHAAAGQRRRRAGAWRGRPRAGELDHARRSVQPEHRHRLVEQARLLLHGLGGGRG
FLHQRGVLLGHVVHLRDRAVHLFDAGALLGGGGGDLRHDVGDPADRYHDVAHGLSGLGHQGVAVLHLVHRVG
DQRLDLLGRGGGTLGEGAHFPGDHREAAALLAGAGCLDRGVEGEDVGLEGDAVDHPDDVGDLARRLVDRGHG
ADHLLHHGAALGRHFRGIGRQRVGLAGILGVELHRAGQFFHARGGFLQARRLLLGARRQFGVAAGDLAGGGV
DGVGGLANLPEHPRQAQRGLVGEVLELAEGALVVGLDALGEVALGQRPEHPRDVAQAAVGGIHQAVQVLRQP
EEEAFLAGLLDALAEVAGGRRLHQLRDFLLGAVFLGAVGPLHGGAEAFVGVVEHWHHVEGEAPAAEVELGLV
HAGEVGQQVPLVRRVLVEHVDVGAQQAAGVEVRQLLADIRFGAAEHLADGAVHVDDVEVVVGDHHVGRDVVQ
RALDPRVVGRRGQLRRGRLGGPAQALANAVDGFGDLRLLARQAVHQRLEVALAVGGDHADHLHLHRDVRGHQ
FVDALGDARRAAF*
AnnotationID:7041GeneID:7041
AnnotatorUID: diggins
Modification Date/Time: 2005-03-23 08:08:59
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16764
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31156
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50043How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5999793Stop: 6001562
Length: 1770
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGTCTCAGAACTCTTCCCAGCCGTCTTCCTTGCGCGCCTTGCTGGCCCGCGCCATGCCGCTGCGGGCCAG
CGGCGCCGGCGCGCTGGGGCGTGGCGCGGACGGCCGCGCGCTGGCGAGCTGGACCACGCTCGGCGGAGTGTC
CAGCCTGAACACCGCCACCGACTGGTTGAGCAGGCCCGCCTGCTCCTGCATGGCCTCGGCGGCGGCCGCGGC
TTCCTCCACCAGCGCGGCGTTCTGCTGGGTCATGTCGTCCATCTGCGAGACCGCGCTGTTCACCTCTTCGAT
GCCGGTGCTCTGCTCGGCGGAGGCGGCGGCGATCTCCGACATGATGTCGGTGACCCGGCGGATCGCTACCAC
GATGTCGCTCATGGTCTGTCCGGCCTGGGCCACCAGGGTGTTGCCGTTCTCCACCTTGTCCACCGAGTCGGA
GATCAGCGTCTTGATCTCCTTGGCCGCGGCGGCGGAACGCTGGGCGAGGGTGCGCACTTCCCCGGCGACCAC
CGCGAAGCCGCGGCCCTGCTCGCCGGCGCGGGCTGCCTCGACCGCGGCGTTGAGGGCGAGGATGTTGGTCTG
GAAGGCGATGCCGTCGATCACCCCGATGATGTCGGCGATCTTGCGCGCCGACTCGTTGATCGAGGACATGGT
GCTGACCACCTTCTGCACCACGGTGCCGCCCTGGGTCGCCACTTCCGAGGCATTGGCCGCCAGCGAGTTGGC
CTGGCGGGCATTCTCGGCGTTGAGCTTCACCGTGCTGGTCAGTTCTTCCATGCTCGAGGCGGTTTCCTCCAG
GCTCGACGCCTGCTGCTCGGTGCGCGCCGACAGTTCGGCGTTGCCGCTGGCGATCTCGCTGGCGGCGGTGTT
GATGGTGTCGGCGGCCTCGCGAATCTGCCCGAGCATCCGCGACAGGCTCAGCGCGGTCTCGTTGGAGAAGTC
CTTGAGCTGGCCGAAGGTGCCCTGGTAGTCGGCCTCGATGCGCTGGGTGAGGTCGCCCTGGGCCAGCGCCCC
GAGCATCCGCGAGACGTCGCGCAAGCCGCGGTCGGCGGTATCCACCAGGCTGTTCAGGTCCTTCGCCAGCCT
GAGGAAGAAGCCTTCCTTGCCGGCCTCCTCGACGCGCTTGCTGAAGTCGCCGGCGGCCGCCGCCTGCACCAG
TTGCGAGACTTCCTGCTCGGCGCGGTGTTCCTCGGTGCGGTCGGTCCATTGCACGGCGGAGCCGAGGCGTTC
GTTGGCGTCGTTGAACACTGGCACCACGTCGAGGGAGAAGCGCCGGCCGCCGAGGTTGAGCTCGGCCTTGTG
CACGCCGGTGAGGTTGGCCAGCAGGTGCCGCTGGTGCGCCGGGTTCTTGTGGAACACGTCGATGTTGGCGCC
CAACAGGCGGCCGGCGTCGAAGTTCGGCAGTTGCTTGCGGATATCCGCTTCGGCGCGGCCGAGCATCTCGCT
GACGGTGCGGTTCATGTAGATGATGTTGAGGTCGTTGTCGGCGATCATCACGTTGGCCGAGACGTTGTCCAG
CGCGCTCTTGATCCGCGCGTTGTAGGCCGCCGTGGCCAGTTGCGCCGAGGTCGCCTCGGCGGCCCCGCGCAG
GCGCTCGCGAACGCCGTCGATGGCTTCGGTGATCTGCGCCTTCTTGCCCGGCAGGCGGTCCATCAGCGGCTC
GAAGTTGCCCTGGCCGTAGGCGGTGACCACGCTGACCACCTTCATCTTCACCGCGATGTGCGCGGCCACCAG
TTCGTTGACGCCCTTGGCGATGCGCGCCGCGCGGCCTTCTAG