ViewGene

Locus Name:
GeneID:
Location:

GeneID:7039
TrivialName: PA14_02160
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_02160
PAO1 Ortholog Locus:
Sequence Length:1995
Protein Length:664
Start: 193731
Stop: 195725
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 177/662 (26%), Positives = 246/662 (37%), Gaps = 167/662 (25%)
Sequence:
GTGGTCGCGGAGCATGTCGGCGAAGCGCCGGCTGCCGAAGCCGAAGCCGTGTTCGCCGCCGGCCTGGTCGAG
GAAACCGTCGGTGCTCAGGTAGAAGGTCCAGCCCGGCGCCAGCGGTACCTCGATGTTGCGGTAGTCGCCACG
GCGCTTGTCGCCGATCGCCCGGCGCGCGCCCTTGAGTTCCTGGACCTCCTCGCCGTCGCTGGCGTACAGCGA
GATCTTCGCCCCGGCGAAGGCCAGCTGGCGGCGCCGGCGGTCGACCCAGACCAGCCCGGCATCCATGTTGGT
GGCCAGCGCCTGGGGGATCTGCTCCTGGCTGAGCATGCTGCGCATCGCCTGGTCGGTCTCGCCGAGGATCGC
CGCCGGGTCGCGGCTGCCCACCGCCTCGATGGCGTGGTCGATGGCGGCGCGGGCGAGCATGGTCATCAGCGC
GCCGGGCACGCCGTGACCGGCGCAGTCGACCACGCCGATCAGGTAGCCGTCGGCCTGCTCGCGGTACACGTA
GAAGTCGCCGCCGACCACGTCGCGCGGTTTCCACAGGATGAAGTGATGCTCGCCGAGGGTGGCGCTGAGCTG
GCGGTCGGGGAGGATCGCGCGCTGGATCAGGCTGGCGTAGTCGAGGCTGTCGCCGATCTTCTTCTGCGCGGC
GGCCATCTCGCGGTTGGCTTCCTCCAGCGCCTGGGTGCGCTCCTGGACCTTGTCTTCCAGCTCGGCGGTGTG
CCGGCGGACTTGGTCGGCCATGCTGGCGAAGGCCTTCGACAGCGAGCCGATCTCGTCCTGGCGCGCCAGCGG
CAGCGGCGTGTCGTAGCGCCCGGCGGCGATCGCCTTGGCCGAGCGCTTGAGGCTGCGCAGGGGGCGCAACAG
CAGGCGCTCGACGGCATAGGCGAAGCCCAGCAGCAGGGCCACCAGCAACAGCAGGAACGTGCCCGCCAGCGG
CCAAAGCCAGCGGTTGTCGAGGACCTGGGCGGCGTGCAGGTCGACGGCGGTGAGCACGTACCAGCGCAGTTG
GGGAATGTAGGCCACGGCGAAGAGTTGCTGGCGGCCGTCGAGGCCGGCCCACAGGCAGTGCACCGAGCCGGC
CTTGGCGCGGGCCAGGCGCATGGCCTCGCGCAGGGCGTCGCGCTGTTCCGGCTGGTCGAGCAGGTCGAACAC
CCGGTGGCGTTCGCTGGCGCCGCCGGCGGCGGAGCTGTAGGCGATCAGGCGGCGGTCCGGGTGGGCCTGGAT
GGCGCCGTCGTCGCCGACGATCATCGGCGTCACGCCCGGCTCGCGGGCGATGATGAAGTCGTCGAGGAAGCC
GCTCAGGTCCAGGCCGCTGCCGGCCAGGCCGATGGGCCGGCCCTGGTCGCGGATCACCAGGTTGAACCAGAC
CTTGGTCAGGTTCAACTTGCTGTCGACATTGACGTTGATGTTGTAGGCGGCGCTGTTGCGCAGGGTATTGAA
GTACCAGGCGTCTTCCGGGTCGCCGGCCTCCAGGGTGTAGCGCGGCCGTTCGCTGTAGGGTTGGCTGCCGTC
GTTGAAGTAGTAGTGCTGGGAGCCGCTGGCGATGATGAAGTAGGCGTGGTCGCGGAAGTCGCCGCGGTAGCC
CTCGGCCTCGCGGAAGAACAGCGCGCGGCGCGCCGGGTCGTCTTCCTTCAGCAGCCAGTCGCGGGTCACCAC
CGATTCGGCGAAACGGCGCGACAACGCCAGTTCGCGGGAGACCGGGGCGAGGATCTTCTGCCGGTGCAGCAG
GGTGAAGTTCTTCGCGTAGGCCAGGCCGAAGTGCGTACGGATGTCGTCCATCGCGCGCCAGCCCAGCAGCAC
CGCCGGGACCAGTGCCAGGGCACAGGCCAGCAACAGCGCCACCACCGATTTGCCGCGCAACCCCCAGTTCGC
CGCCATGGCTATCCCTATCAGTTTCTCGCCCGGCCCGCGGCCGAAATCATGGATCGAAAGCGTGTGTCGAAC
TTTTGGCGAAAGGGCCAATTGTGCAGATGTGCATTATTTCAGGCAACGTAA
Translation:
MVAEHVGEAPAAEAEAVFAAGLVEETVGAQVEGPARRQRYLDVAVVATALVADRPARALEFLDLLAVAGVQR
DLRPGEGQLAAPAVDPDQPGIHVGGQRLGDLLLAEHAAHRLVGLAEDRRRVAAAHRLDGVVDGGAGEHGHQR
AGHAVTGAVDHADQVAVGLLAVHVEVAADHVARFPQDEVMLAEGGAELAVGEDRALDQAGVVEAVADLLLRG
GHLAVGFLQRLGALLDLVFQLGGVPADLVGHAGEGLRQRADLVLARQRQRRVVAPGGDRLGRALEAAQGAQQ
QALDGIGEAQQQGHQQQQERARQRPKPAVVEDLGGVQVDGGEHVPAQLGNVGHGEELLAAVEAGPQAVHRAG
LGAGQAHGLAQGVALFRLVEQVEHPVAFAGAAGGGAVGDQAAVRVGLDGAVVADDHRRHARLAGDDEVVEEA
AQVQAAAGQADGPALVADHQVEPDLGQVQLAVDIDVDVVGGAVAQGIEVPGVFRVAGLQGVARPFAVGLAAV
VEVVVLGAAGDDEVGVVAEVAAVALGLAEEQRAARRVVFLQQPVAGHHRFGETARQRQFAGDRGEDLLPVQQ
GEVLRVGQAEVRTDVVHRAPAQQHRRDQCQGTGQQQRHHRFAAQPPVRRHGYPYQFLARPAAEIMDRKRVSN
FWRKGQLCRCALFQAT*
AnnotationID:7039GeneID:7039
AnnotatorUID: diggins
Modification Date/Time: 2005-03-23 07:07:47
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16760
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31152
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50041How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5995070Stop: 5997064
Length: 1995
Start Codon: GTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGTCGCGGAGCATGTCGGCGAAGCGCCGGCTGCCGAAGCCGAAGCCGTGTTCGCCGCCGGCCTGGTCGAG
GAAACCGTCGGTGCTCAGGTAGAAGGTCCAGCCCGGCGCCAGCGGTACCTCGATGTTGCGGTAGTCGCCACG
GCGCTTGTCGCCGATCGCCCGGCGCGCGCCCTTGAGTTCCTGGACCTCCTCGCCGTCGCTGGCGTACAGCGA
GATCTTCGCCCCGGCGAAGGCCAGCTGGCGGCGCCGGCGGTCGACCCAGACCAGCCCGGCATCCATGTTGGT
GGCCAGCGCCTGGGGGATCTGCTCCTGGCTGAGCATGCTGCGCATCGCCTGGTCGGTCTCGCCGAGGATCGC
CGCCGGGTCGCGGCTGCCCACCGCCTCGATGGCGTGGTCGATGGCGGCGCGGGCGAGCATGGTCATCAGCGC
GCCGGGCACGCCGTGACCGGCGCAGTCGACCACGCCGATCAGGTAGCCGTCGGCCTGCTCGCGGTACACGTA
GAAGTCGCCGCCGACCACGTCGCGCGGTTTCCACAGGATGAAGTGATGCTCGCCGAGGGTGGCGCTGAGCTG
GCGGTCGGGGAGGATCGCGCGCTGGATCAGGCTGGCGTAGTCGAGGCTGTCGCCGATCTTCTTCTGCGCGGC
GGCCATCTCGCGGTTGGCTTCCTCCAGCGCCTGGGTGCGCTCCTGGACCTTGTCTTCCAGCTCGGCGGTGTG
CCGGCGGACTTGGTCGGCCATGCTGGCGAAGGCCTTCGACAGCGAGCCGATCTCGTCCTGGCGCGCCAGCGG
CAGCGGCGTGTCGTAGCGCCCGGCGGCGATCGCCTTGGCCGAGCGCTTGAGGCTGCGCAGGGGGCGCAACAG
CAGGCGCTCGACGGCATAGGCGAAGCCCAGCAGCAGGGCCACCAGCAACAGCAGGAACGTGCCCGCCAGCGG
CCAAAGCCAGCGGTTGTCGAGGACCTGGGCGGCGTGCAGGTCGACGGCGGTGAGCACGTACCAGCGCAGTTG
GGGAATGTAGGCCACGGCGAAGAGTTGCTGGCGGCCGTCGAGGCCGGCCCACAGGCAGTGCACCGAGCCGGC
CTTGGCGCGGGCCAGGCGCATGGCCTCGCGCAGGGCGTCGCGCTGTTCCGGCTGGTCGAGCAGGTCGAACAC
CCGGTGGCGTTCGCTGGCGCCGCCGGCGGCGGAGCTGTAGGCGATCAGGCGGCGGTCCGGGTGGGCCTGGAT
GGCGCCGTCGTCGCCGACGATCATCGGCGTCACGCCCGGCTCGCGGGCGATGATGAAGTCGTCGAGGAAGCC
GCTCAGGTCCAGGCCGCTGCCGGCCAGGCCGATGGGCCGGCCCTGGTCGCGGATCACCAGGTTGAACCAGAC
CTTGGTCAGGTTCAACTTGCTGTCGACATTGACGTTGATGTTGTAGGCGGCGCTGTTGCGCAGGGTATTGAA
GTACCAGGCGTCTTCCGGGTCGCCGGCCTCCAGGGTGTAGCGCGGCCGTTCGCTGTAGGGTTGGCTGCCGTC
GTTGAAGTAGTAGTGCTGGGAGCCGCTGGCGATGATGAAGTAGGCGTGGTCGCGGAAGTCGCCGCGGTAGCC
CTCGGCCTCGCGGAAGAACAGCGCGCGGCGCGCCGGGTCGTCTTCCTTCAGCAGCCAGTCGCGGGTCACCAC
CGATTCGGCGAAACGGCGCGACAACGCCAGTTCGCGGGAGACCGGGGCGAGGATCTTCTGCCGGTGCAGCAG
GGTGAAGTTCTTCGCGTAGGCCAGGCCGAAGTGCGTACGGATGTCGTCCATCGCGCGCCAGCCCAGCAGCAC
CGCCGGGACCAGTGCCAGGGCACAGGCCAGCAACAGCGCCACCACCGATTTGCCGCGCAACCCCCAGTTCGC
CGCCATGGCTATCCCTATCAGTTTCTCGCCCGGCCCGCGGCCGAAATCATGGATCGAAAGCGTGTGTCGAAC
TTTTGGCGAAAGGGCCAATTGTGCAGATGTGCATTATTTCAGGCAACGTAA