ViewGene

Locus Name:
GeneID:
Location:

GeneID:7034
TrivialName: PA14_01950
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_01950
PAO1 Ortholog Locus:
Sequence Length:1401
Protein Length:466
Start: 177570
Stop: 176170
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAF10810.1|AE001971_10 (AE001971) hypothetical protein [Deinococcus radiodurans]
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Sequence:
TTGCCAGCAGCGCGCCCTTGCCGACGAAGTCACCGACGTCGAACAGGCGCGAGGCGATCCGTCCGTTGGTGC
GGAAGCCGAGCACGCTCTCGTAGCGCGCCTGGATGCTCCCGGCGAAGCGACCGAGGTCGTCGTTCTTCAGGG
TCTTCACGGTCACCGTCAGCACCGGCCGCGGCGGTGCCGGCGGCGGCTCGTCGCCGCAGCCGGAGAGGAGCA
GGGCGAAGCCGAACAGGCCGGCGAGGGAAAACGGCTTCATGGCTGGCCTCCGCCCACGGCGTCGCGGCTGGC
GGTGCTCTGGGTCGGCTGCGGCGGCTGGGCCACCTCGACCACCTGGCCCGGATGGAGCAGTTGGCCGCCCAC
CGTGACCACTGTCTGGCCCGCCTCCAGGCCACCGTCGATGACCACCTTCTCGCTGGCGTAGCGTGCCACCCG
CACCGGTTGCAGGCGCACCTTGCTTTCCTGATCGAGCAACCAGACCGCCGGCTGCTCGCCGACCTTGGACAG
CGCCGACCAGGGCAGCACCACGCTGTGCGCGGCCGGCGCGGCGACGCTGGCGTTGACCACGCTGCCGAGGCT
CATTTCCGCCGGCACCGAGTCGAGGCCGACCTTGACCTTCAGCGTACCGCTGCGCTCGTCCACCGTCGGGGT
GATCTCGCGGACCTTGCCGCTGGCGGTGACTTCCGGCTTGCCGAGCAGGCTGACGGTGATCCGCTGGCCGTC
GACATCGTGGCTGAACAACGACTCGTAGACGTTGAACACCGCGTCGCGCTCGCCGTCGCGGGCCAGGGTGAA
GATCGGCACGGTGGCCTGCACCACCTGGCCGACCTCGGCCTGGCGGGCGGTGATGACCCCGGCGTCGGAGGC
ACGCAGCTCGGTATAGGAAAGCAGGTCGCGGGCGTTGGCCAACTGCGCCTGGGCGGCCTTCAGCGAACTCTG
CGCGCTGCGCACCGAGGCCAGCGCCTGGTCGTACTCGCTCTGGCTGGTGTAGCCCTTGGGCAGCAGCGCCTT
CTGCCGCTGGTAGTTGAGGTCGGCGAGCTTCGACTGCGCCTGCTGCGCGGCGACCGCCGCCTGGGCGTTCTC
CACGTTGCTGCGCTGGTCCTGCGGGTCGAGCCGCGCCAGCACCTGGCCAGCCGCGACGTGGTCGCCGACATC
GACCAGGCGCTCGACGATCTTGCCGCCGACACGGAACGACTGGTCGGCCTGTACCCGTGCCTGGATGTCGCC
GGTGATCGAGGTGGCCGAGGCGAACTCGGCCATCTTCACCGTCTGCGCCAGCACACGGACGTGTTCCTCGGC
GGGCGGCTCGGCGCCGCAACCGACAAGCAGGCTGGCGCACAGGATGGCGGGCAGCGCCATCCGCGACCAGCG
ACCTTTGGAATGAAAAGCGCCTCTGGCGTCTGA
Translation:
MPAARPCRRSHRRRTGARRSVRWCGSRARSRSAPGCSRRSDRGRRSSGSSRSPSAPAAAVPAAARRRSRRGA
GRSRTGRRGKTASWLASAHGVAAGGALGRLRRLGHLDHLARMEQLAAHRDHCLARLQATVDDHLLAGVACHP
HRLQAHLAFLIEQPDRRLLADLGQRRPGQHHAVRGRRGDAGVDHAAEAHFRRHRVEADLDLQRTAALVHRRG
DLADLAAGGDFRLAEQADGDPLAVDIVAEQRLVDVEHRVALAVAGQGEDRHGGLHHLADLGLAGGDDPGVGG
TQLGIGKQVAGVGQLRLGGLQRTLRAAHRGQRLVVLALAGVALGQQRLLPLVVEVGELRLRLLRGDRRLGVL
HVAALVLRVEPRQHLASRDVVADIDQALDDLAADTERLVGLYPCLDVAGDRGGRGELGHLHRLRQHTDVFLG
GRLGAATDKQAGAQDGGQRHPRPATFGMKSASGV*
AnnotationID:7034GeneID:7034
AnnotatorUID: diggins
Modification Date/Time: 2005-03-23 07:07:48
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:16753
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31142
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50036How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5978909Stop: 5977509
Length: 1401
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCCAGCAGCGCGCCCTTGCCGACGAAGTCACCGACGTCGAACAGGCGCGAGGCGATCCGTCCGTTGGTGC
GGAAGCCGAGCACGCTCTCGTAGCGCGCCTGGATGCTCCCGGCGAAGCGACCGAGGTCGTCGTTCTTCAGGG
TCTTCACGGTCACCGTCAGCACCGGCCGCGGCGGTGCCGGCGGCGGCTCGTCGCCGCAGCCGGAGAGGAGCA
GGGCGAAGCCGAACAGGCCGGCGAGGGAAAACGGCTTCATGGCTGGCCTCCGCCCACGGCGTCGCGGCTGGC
GGTGCTCTGGGTCGGCTGCGGCGGCTGGGCCACCTCGACCACCTGGCCCGGATGGAGCAGTTGGCCGCCCAC
CGTGACCACTGTCTGGCCCGCCTCCAGGCCACCGTCGATGACCACCTTCTCGCTGGCGTAGCGTGCCACCCG
CACCGGTTGCAGGCGCACCTTGCTTTCCTGATCGAGCAACCAGACCGCCGGCTGCTCGCCGACCTTGGACAG
CGCCGACCAGGGCAGCACCACGCTGTGCGCGGCCGGCGCGGCGACGCTGGCGTTGACCACGCTGCCGAGGCT
CATTTCCGCCGGCACCGAGTCGAGGCCGACCTTGACCTTCAGCGTACCGCTGCGCTCGTCCACCGTCGGGGT
GATCTCGCGGACCTTGCCGCTGGCGGTGACTTCCGGCTTGCCGAGCAGGCTGACGGTGATCCGCTGGCCGTC
GACATCGTGGCTGAACAACGACTCGTAGACGTTGAACACCGCGTCGCGCTCGCCGTCGCGGGCCAGGGTGAA
GATCGGCACGGTGGCCTGCACCACCTGGCCGACCTCGGCCTGGCGGGCGGTGATGACCCCGGCGTCGGAGGC
ACGCAGCTCGGTATAGGAAAGCAGGTCGCGGGCGTTGGCCAACTGCGCCTGGGCGGCCTTCAGCGAACTCTG
CGCGCTGCGCACCGAGGCCAGCGCCTGGTCGTACTCGCTCTGGCTGGTGTAGCCCTTGGGCAGCAGCGCCTT
CTGCCGCTGGTAGTTGAGGTCGGCGAGCTTCGACTGCGCCTGCTGCGCGGCGACCGCCGCCTGGGCGTTCTC
CACGTTGCTGCGCTGGTCCTGCGGGTCGAGCCGCGCCAGCACCTGGCCAGCCGCGACGTGGTCGCCGACATC
GACCAGGCGCTCGACGATCTTGCCGCCGACACGGAACGACTGGTCGGCCTGTACCCGTGCCTGGATGTCGCC
GGTGATCGAGGTGGCCGAGGCGAACTCGGCCATCTTCACCGTCTGCGCCAGCACACGGACGTGTTCCTCGGC
GGGCGGCTCGGCGCCGCAACCGACAAGCAGGCTGGCGCACAGGATGGCGGGCAGCGCCATCCGCGACCAGCG
ACCTTTGGAATGAAAAGCGCCTCTGGCGTCTGA