ViewGene

Locus Name:
GeneID:
Location:

GeneID:7030
TrivialName: PA14_01820
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_01820
PAO1 Ortholog Locus:
Sequence Length:1347
Protein Length:448
Start: 168282
Stop: 166936
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCGCTGGCGCTGGGCCAGGAAGGCCTTGAGCAGATCCGCGCGGCGCGCCGCCTCGCCGTCTGCCGGCAAG
GCATCCGGGCGCGGGCCGGAGGGTAGGTCGCGGTCGGGCATCGGTGAGGGACGGCTGCACGAAAGCCGGCGC
CGGGGCGGCGCCATGGGAATGCTGAGCAGCCCGCAAATGATAATGCTTATCATCAATACCGAGAAGCCGGCG
ACGACGAAACGCCTTGCGGGTCGCGCGCCGGGTTGCCCGGCGCGCCGCCCCTCACTTCACCAGGCGCGCATC
CAGGCTGTTCTGCGCCAGGCGCCTGGCCTGCTCCTCGGTCATTCCCAGGCTCTGCTGCAAGGCATGGAAGTT
CTCGGTGACATAGCCGCCGAAGTAGGCCGGGTCATCGGAGTTCACCGTCACCTTCACGCCGCGTTCGAGCAT
GTCGAGGATGGTGTGCTGGCTCATGTCGTCGAACACGCAGAGCTTGGTGTTGGACAGCGGGCAGACGGTCAG
CGGGATCTGTTCGTCGATCAGCCGCCGCATCAGCCGCTCGTCCTCGAAGGCGCGCACGCCGTGGTCGATGCG
CTCGACCTTGAGCAGGTCGAGGGCTTCCCAGATGTACTCGGGCGGCCCCTCTTCGCCGGCATGGGCGACGGT
GAGGAAGCCTTCGCTGCGGGCGCGGTCGAAGACCCGCTGGAACTTGCTCGGCGGATGCCCGACTTCCGAGCT
GTCGAGGCCGACGGCGATGAAGGCGTCGCGGAACGGCAGCGCCTGGTCGAGGGTTTTCTGCGCCTGTTCCTC
GCTGAGGTGGCGGAGGAAGCTGAGGATCAGCCCATGGCGGATGCCCAGCAGCTTCTCGCCGTCCTGCAGCGC
GGCGCGGATGCCGGCGAGCACCACCTCGAAGGGAATGCCGCGATCGGTGTGGGTCTGCGGGTCGAAGAACGG
CTCGACGTGGACGACGTTCTGCGCCTTGCACTTCTGCAGGTAGGCCCAGGTCAGGTCGTAGAAGTCCTGCTC
GGTGCGCAGCACGTCGGCGCCGGCGTAGTAGAGGTCGAGGAATTCCTGCAGGTTGTTGAAGGCGTAGGCCTT
GCGCAGGGTCTCGACGTCGTTCCAGGGCAGGGCGATGCGGTTGCGCTCGGCGAGGGCGAACAGCAGCTCCGG
CTCCAGGGTACCTTCCAGGTGCAGGTGCAGTTCGGCCTTGGGCAAGGCGTTGAGCCATTCGTACATGGGGTG
GGTTCTCGATCAGGCTGGTCTTGGCCGGCAAGTTTAACCTGTCCCGGGAGTCAGGCCCGCGGCAAACCCGCG
AGCCGCTCCCGCGCGCGACGGGCGGCTCAGGCCGTTTCGCCGCGCCGATAG
Translation:
MRWRWARKALSRSARRAASPSAGKASGRGPEGRSRSGIGEGRLHESRRRGGAMGMLSSPQMIMLIINTEKPA
TTKRLAGRAPGCPARRPSLHQARIQAVLRQAPGLLLGHSQALLQGMEVLGDIAAEVGRVIGVHRHLHAAFEH
VEDGVLAHVVEHAELGVGQRADGQRDLFVDQPPHQPLVLEGAHAVVDALDLEQVEGFPDVLGRPLFAGMGDG
EEAFAAGAVEDPLELARRMPDFRAVEADGDEGVAERQRLVEGFLRLFLAEVAEEAEDQPMADAQQLLAVLQR
GADAGEHHLEGNAAIGVGLRVEERLDVDDVLRLALLQVGPGQVVEVLLGAQHVGAGVVEVEEFLQVVEGVGL
AQGLDVVPGQGDAVALGEGEQQLRLQGTFQVQVQFGLGQGVEPFVHGVGSRSGWSWPASLTCPGSQARGKPA
SRSRARRAAQAVSPRR*
AnnotationID:7030GeneID:7030
AnnotatorUID: diggins
Modification Date/Time: 2005-03-23 06:06:03
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13734
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31134
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50032How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5969621Stop: 5968275
Length: 1347
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCGCTGGCGCTGGGCCAGGAAGGCCTTGAGCAGATCCGCGCGGCGCGCCGCCTCGCCGTCTGCCGGCAAG
GCATCCGGGCGCGGGCCGGAGGGTAGGTCGCGGTCGGGCATCGGTGAGGGACGGCTGCACGAAAGCCGGCGC
CGGGGCGGCGCCATGGGAATGCTGAGCAGCCCGCAAATGATAATGCTTATCATCAATACCGAGAAGCCGGCG
ACGACGAAACGCCTTGCGGGTCGCGCGCCGGGTTGCCCGGCGCGCCGCCCCTCACTTCACCAGGCGCGCATC
CAGGCTGTTCTGCGCCAGGCGCCTGGCCTGCTCCTCGGTCATTCCCAGGCTCTGCTGCAAGGCATGGAAGTT
CTCGGTGACATAGCCGCCGAAGTAGGCCGGGTCATCGGAGTTCACCGTCACCTTCACGCCGCGTTCGAGCAT
GTCGAGGATGGTGTGCTGGCTCATGTCGTCGAACACGCAGAGCTTGGTGTTGGACAGCGGGCAGACGGTCAG
CGGGATCTGTTCGTCGATCAGCCGCCGCATCAGCCGCTCGTCCTCGAAGGCGCGCACGCCGTGGTCGATGCG
CTCGACCTTGAGCAGGTCGAGGGCTTCCCAGATGTACTCGGGCGGCCCCTCTTCGCCGGCATGGGCGACGGT
GAGGAAGCCTTCGCTGCGGGCGCGGTCGAAGACCCGCTGGAACTTGCTCGGCGGATGCCCGACTTCCGAGCT
GTCGAGGCCGACGGCGATGAAGGCGTCGCGGAACGGCAGCGCCTGGTCGAGGGTTTTCTGCGCCTGTTCCTC
GCTGAGGTGGCGGAGGAAGCTGAGGATCAGCCCATGGCGGATGCCCAGCAGCTTCTCGCCGTCCTGCAGCGC
GGCGCGGATGCCGGCGAGCACCACCTCGAAGGGAATGCCGCGATCGGTGTGGGTCTGCGGGTCGAAGAACGG
CTCGACGTGGACGACGTTCTGCGCCTTGCACTTCTGCAGGTAGGCCCAGGTCAGGTCGTAGAAGTCCTGCTC
GGTGCGCAGCACGTCGGCGCCGGCGTAGTAGAGGTCGAGGAATTCCTGCAGGTTGTTGAAGGCGTAGGCCTT
GCGCAGGGTCTCGACGTCGTTCCAGGGCAGGGCGATGCGGTTGCGCTCGGCGAGGGCGAACAGCAGCTCCGG
CTCCAGGGTACCTTCCAGGTGCAGGTGCAGTTCGGCCTTGGGCAAGGCGTTGAGCCATTCGTACATGGGGTG
GGTTCTCGATCAGGCTGGTCTTGGCCGGCAAGTTTAACCTGTCCCGGGAGTCAGGCCCGCGGCAAACCCGCG
AGCCGCTCCCGCGCGCGACGGGCGGCTCAGGCCGTTTCGCCGCGCCGATAG