ViewGene

Locus Name:
GeneID:
Location:

GeneID:7028
TrivialName: PA14_01740
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_01740
PAO1 Ortholog Locus:
Sequence Length:1488
Protein Length:495
Start: 161265
Stop: 159778
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 121/459 (26%), Positives = 157/459 (34%), Gaps = 107/459 (23%)
Sequence:
ATGCGAACCGACAGAGGAAGCCTGGCGCCTCCTCCGTCGGCGCCCGCCTCACCCGGCGATCAGGGCGCTCGC
CGCCTCGCGGTGGCGGGCGATCAGGGCGGCCAGGTCGAGCCCTTCCACGGCACCATCGACCACTCGCCAGGC
GCCGCCGACCATTACCCGGTCGGCACGGTCGGCAGCGCACAGCAGCAGCGCCGAGAGCGGGTCGTGGCTACC
CGAGAAGCGCAGCTCGTCGAGCTTGAACAAGGCCAGGTCGGCCTGCTTGCCGGGGGCCAGCTCGCCGATGTC
GCTGCGTCCGAGCAGGCGTGCCGAGCCACGGGTGGCCCAGCCCAGGGCGAGTTCCGGGGTGATTCGCTCGGC
GCCGTAGCGCAGGCGTTGCAGGTACAGGGCCTGGCGCGCCTCGAGGATCATGTTCGAGGCGTCGTTGGAGGC
CGAACCATCGACTCCCAGGCCAATCGGCGCGCCGGCCGCCTCCAGCTCCACGGTCGGGCAGATGCCCGAGGC
CAGGCGCATGTTCGAACTCGGGCAATGGCAGATACCGGTGCCCGCCTCGCCGAGCCGGCGGATCTCCTCGGC
GTTGAAGTGGATGCCGTGGGCCAGCCAGGTGCGCGGGCCGAGCCAGCCGACGCTATCCAGGTAGTCCACGGT
GCGCAGGCCGAAGCGCTGCAGGCAGAAGTCTTCCTCGTCGAGGGTCTCCGCCAGGTGGGTGTGCAGGCGTAC
GTCATGGCGCGCCGCCAGTTCGGCGCTGGCGCGCATGATCTCCGGAGTCACCGAGAACGGCGAGCAGGGCGC
CAGGGCGATCTGCACCCGGGCGCCTTCGCCGCGCTGGTGGTAGCGAGCGATCAGTCGCTCGCTGTCGGCGAG
GATGGTCTCGGCCTCCTGCACCGTCTGCTGCGGCGGCAAGCCGCCGTCCTTCTCGCCGAGGCTCATCGAGCC
GCGGGTGAGCATGGCGCGCATGCCCAGTTCCTCGACCACCCCGGCCTGCACGTCGATAGCCTGTTCGAGGCC
GCCGGGGAACAGGTAGTGGTGGTCGGCGGCAGTGGTGCAGCCAGACAGCAGCAGCTCGGCCAGCGCCACCTT
GGTGGCCAGTTCGAGCTTCTCCGGGGTCAGCCGCGCCCAGACCGGGTAGAGGGTTTTCAGCCAGGGGAACAG
CGGCTGGTTGACCACCGGCGCCCAGGCGCGGGTGAGGGTCTGGTAGAAGTGGTGATGGGTGTTGATGAGTCC
CGGCAAGACCACGTGCCGGCTGGCGTCGAACTGGCTGGCGCAGGGCTGCGCGGGCTGCTGGCCGGCGCCGAG
CAGCTCGACGATGCGGCCGTCTTCGACGACCAGGCCGCCGGCGGCGTCGAGACCGTTGGCGGTGAAGATGGC
GAGGGGTTTGCGAATCCAGGTGCGGGACATGTGCGGACCTTCGTCGGATCGGCGGGCCGGCGCGAACGCTGC
CGGCCCTCGGTTGATGAGAGCCAGCTCAGTGTTCACCCTGTCTGCTGA
Translation:
MRTDRGSLAPPPSAPASPGDQGARRLAVAGDQGGQVEPFHGTIDHSPGAADHYPVGTVGSAQQQRRERVVAT
REAQLVELEQGQVGLLAGGQLADVAASEQACRATGGPAQGEFRGDSLGAVAQALQVQGLARLEDHVRGVVGG
RTIDSQANRRAGRLQLHGRADARGQAHVRTRAMADTGARLAEPADLLGVEVDAVGQPGARAEPADAIQVVHG
AQAEALQAEVFLVEGLRQVGVQAYVMARRQFGAGAHDLRSHRERRAGRQGDLHPGAFAALVVASDQSLAVGE
DGLGLLHRLLRRQAAVLLAEAHRAAGEHGAHAQFLDHPGLHVDSLFEAAGEQVVVVGGSGAARQQQLGQRHL
GGQFELLRGQPRPDRVEGFQPGEQRLVDHRRPGAGEGLVEVVMGVDESRQDHVPAGVELAGAGLRGLLAGAE
QLDDAAVFDDQAAGGVETVGGEDGEGFANPGAGHVRTFVGSAGRRERCRPSVDESQLSVHPVC*
AnnotationID:7028GeneID:7028
AnnotatorUID: diggins
Modification Date/Time: 2005-03-23 06:06:17
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13731
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31130
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50030How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5962604Stop: 5961117
Length: 1488
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCGAACCGACAGAGGAAGCCTGGCGCCTCCTCCGTCGGCGCCCGCCTCACCCGGCGATCAGGGCGCTCGC
CGCCTCGCGGTGGCGGGCGATCAGGGCGGCCAGGTCGAGCCCTTCCACGGCACCATCGACCACTCGCCAGGC
GCCGCCGACCATTACCCGGTCGGCACGGTCGGCAGCGCACAGCAGCAGCGCCGAGAGCGGGTCGTGGCTACC
CGAGAAGCGCAGCTCGTCGAGCTTGAACAAGGCCAGGTCGGCCTGCTTGCCGGGGGCCAGCTCGCCGATGTC
GCTGCGTCCGAGCAGGCGTGCCGAGCCACGGGTGGCCCAGCCCAGGGCGAGTTCCGGGGTGATTCGCTCGGC
GCCGTAGCGCAGGCGTTGCAGGTACAGGGCCTGGCGCGCCTCGAGGATCATGTTCGAGGCGTCGTTGGAGGC
CGAACCATCGACTCCCAGGCCAATCGGCGCGCCGGCCGCCTCCAGCTCCACGGTCGGGCAGATGCCCGAGGC
CAGGCGCATGTTCGAACTCGGGCAATGGCAGATACCGGTGCCCGCCTCGCCGAGCCGGCGGATCTCCTCGGC
GTTGAAGTGGATGCCGTGGGCCAGCCAGGTGCGCGGGCCGAGCCAGCCGACGCTATCCAGGTAGTCCACGGT
GCGCAGGCCGAAGCGCTGCAGGCAGAAGTCTTCCTCGTCGAGGGTCTCCGCCAGGTGGGTGTGCAGGCGTAC
GTCATGGCGCGCCGCCAGTTCGGCGCTGGCGCGCATGATCTCCGGAGTCACCGAGAACGGCGAGCAGGGCGC
CAGGGCGATCTGCACCCGGGCGCCTTCGCCGCGCTGGTGGTAGCGAGCGATCAGTCGCTCGCTGTCGGCGAG
GATGGTCTCGGCCTCCTGCACCGTCTGCTGCGGCGGCAAGCCGCCGTCCTTCTCGCCGAGGCTCATCGAGCC
GCGGGTGAGCATGGCGCGCATGCCCAGTTCCTCGACCACCCCGGCCTGCACGTCGATAGCCTGTTCGAGGCC
GCCGGGGAACAGGTAGTGGTGGTCGGCGGCAGTGGTGCAGCCAGACAGCAGCAGCTCGGCCAGCGCCACCTT
GGTGGCCAGTTCGAGCTTCTCCGGGGTCAGCCGCGCCCAGACCGGGTAGAGGGTTTTCAGCCAGGGGAACAG
CGGCTGGTTGACCACCGGCGCCCAGGCGCGGGTGAGGGTCTGGTAGAAGTGGTGATGGGTGTTGATGAGTCC
CGGCAAGACCACGTGCCGGCTGGCGTCGAACTGGCTGGCGCAGGGCTGCGCGGGCTGCTGGCCGGCGCCGAG
CAGCTCGACGATGCGGCCGTCTTCGACGACCAGGCCGCCGGCGGCGTCGAGACCGTTGGCGGTGAAGATGGC
GAGGGGTTTGCGAATCCAGGTGCGGGACATGTGCGGACCTTCGTCGGATCGGCGGGCCGGCGCGAACGCTGC
CGGCCCTCGGTTGATGAGAGCCAGCTCAGTGTTCACCCTGTCTGCTGA