ViewGene

Locus Name:
GeneID:
Location:

GeneID:7026
TrivialName: PA14_01650
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_01650
PAO1 Ortholog Locus:
Sequence Length:1569
Protein Length:522
Start: 149754
Stop: 151322
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 95/347 (27%), Positives = 133/347 (38%), Gaps = 51/347 (14%)
Sequence:
GTGACGCGAGCTTCGGCCGCCCGCCGAACGGCGTCTTTTCTCTACGGCGCGAGGAGGTGGCATGCAGCGACG
GGCCGAGCCAACGCGGGAAAGAGGCTCTCAGCCCTTCGCATGGCGCCGCTCCCCCATCACCCAGGTCTCCGC
CACCGCGCGGTCGTCGCCCAGGGTGTTCAGCACGAACAGGGTATCGGCCAGGCCGCGCGCATGCTCCATGCG
CTGGGCGATCATCGGCGTGGCGGCCAGGTCGAGAGCGACGAAGTCGGCCTCGCGGCCGGGCAGGAAGTTACC
GACCAGGCCGTCCAGGTCGAGCGCCCTGGCGCCGCCGAGGGTGGCCAGGTAGAGCGCCTGGAACGGATCGAG
GCTGGTGCCGCGCAATTGCTGGATCTTGTAAGCGTCGGCGAGGTTGGCCAGCAGCGACAGGCTGGTGCCGCC
GCCGACGTCGCTGCCGATGCCGACGCGGATGCCGTATTGCTGGGCGCGGCCAAGGTCGAACAGGCCGGAGCC
GATGAACAGGTTGGAACTGGGACAGTGCGCCAGCGCCGCGTTCTTGTGCGCCAGGCAGCGGCATTCGCGTTC
GGAGAGATGGATGCCATGGGCGAACACGCTGCGTTCGCCGACCAGGCCGGCGCGATGATAGACGTCCAGGTA
GTCCTGTGCCTGGGGAAACAGCTCGCCGACCCAGGCGACTTCCTTGAGGTTCTCCGAAAGATGGGTGTGCAG
GTAGACGCCGGGATACTCGTCCAGCAGGCGCGCCGCCGCGGCCAGTTGCTCGGGCGAGGAAGTCGGCGCGAA
GCGTGGGGTGACCGCGTATTGCAGGCGCCCGTTGCCGTGCCAGCGCTCGATCAGCGCGCGGCTCTCGGCGTA
GCCGCTGGCCGCGGTATCGCACAGCGCCGGCGGCGCGTTGCGGTCCATCAGCACTTTGCCGGCGATCATCCG
CAGGCGGCGCTTCTGCGCGGCCTGGAAGAATGCCTCGGCGGATACCGCATGGACCGTGCCGAACACCAGCGC
GGTAGTGGTGCCGTGGCGCAGCAGTTCGTCGAGGAACAGCTCGGCCTGGGCGGCGGCGTAGCCGGCATCGGC
GAAGCGCTGCTCGGCGGGAAAGGTGTGGGTTTCCAGCCAGTCCAGCAGTTGGGTGCCGTAGGAGGCGATCAC
TCCGAGTTGCGGGTAATGCACATGGCAGTCGACGAAGCCGGGCAGCAGCAGGCGCTGCGGATGCTCCTCCAG
CGGCAGGTCGGCGGGCAGTTGTGGCAGCAGGTAGGCTGCGTGATCGAGCGCGCGCACGTGGCCGTGTTCGAT
CCACAGCAGGCCGTCCTCGAAATACTCCCAGGCCTTGTCGCCGAGCTTCGCCGGGTCGCCGAGGAAATGCAG
GATCCGCCCGCGATGGGCCGAACTGCTCATCGCGCTCCCGCCGTGGTCGGAGCGCAGGACAAGTGGGGGGAC
GAAGTTGCCAGCAGGTACTGCATCGTTCATCTCCTCTGCTGCCGGAACGGCGCTTTCGCCTCTTTAGTCCGG
GAAATCGCCGGAAATATCCCGTCCTTGGCACGTGATCCCGCGGTGCAGGACGGATGA
Translation:
MTRASAARRTASFLYGARRWHAATGRANAGKRLSALRMAPLPHHPGLRHRAVVAQGVQHEQGIGQAARMLHA
LGDHRRGGQVESDEVGLAAGQEVTDQAVQVERPGAAEGGQVERLERIEAGAAQLLDLVSVGEVGQQRQAGAA
ADVAADADADAVLLGAAKVEQAGADEQVGTGTVRQRRVLVRQAAAFAFGEMDAMGEHAAFADQAGAMIDVQV
VLCLGKQLADPGDFLEVLRKMGVQVDAGILVQQARRRGQLLGRGSRREAWGDRVLQAPVAVPALDQRAALGV
AAGRGIAQRRRRVAVHQHFAGDHPQAALLRGLEECLGGYRMDRAEHQRGSGAVAQQFVEEQLGLGGGVAGIG
EALLGGKGVGFQPVQQLGAVGGDHSELRVMHMAVDEAGQQQALRMLLQRQVGGQLWQQVGCVIERAHVAVFD
PQQAVLEILPGLVAELRRVAEEMQDPPAMGRTAHRAPAVVGAQDKWGDEVASRYCIVHLLCCRNGAFASLVR
EIAGNIPSLARDPAVQDG*
AnnotationID:7026GeneID:7026
AnnotatorUID: diggins
Modification Date/Time: 2005-03-23 05:05:57
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16747
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31126
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50028How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5951093Stop: 5952661
Length: 1569
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGACGCGAGCTTCGGCCGCCCGCCGAACGGCGTCTTTTCTCTACGGCGCGAGGAGGTGGCATGCAGCGACG
GGCCGAGCCAACGCGGGAAAGAGGCTCTCAGCCCTTCGCATGGCGCCGCTCCCCCATCACCCAGGTCTCCGC
CACCGCGCGGTCGTCGCCCAGGGTGTTCAGCACGAACAGGGTATCGGCCAGGCCGCGCGCATGCTCCATGCG
CTGGGCGATCATCGGCGTGGCGGCCAGGTCGAGAGCGACGAAGTCGGCCTCGCGGCCGGGCAGGAAGTTACC
GACCAGGCCGTCCAGGTCGAGCGCCCTGGCGCCGCCGAGGGTGGCCAGGTAGAGCGCCTGGAACGGATCGAG
GCTGGTGCCGCGCAATTGCTGGATCTTGTAAGCGTCGGCGAGGTTGGCCAGCAGCGACAGGCTGGTGCCGCC
GCCGACGTCGCTGCCGATGCCGACGCGGATGCCGTATTGCTGGGCGCGGCCAAGGTCGAACAGGCCGGAGCC
GATGAACAGGTTGGAACTGGGACAGTGCGCCAGCGCCGCGTTCTTGTGCGCCAGGCAGCGGCATTCGCGTTC
GGAGAGATGGATGCCATGGGCGAACACGCTGCGTTCGCCGACCAGGCCGGCGCGATGATAGACGTCCAGGTA
GTCCTGTGCCTGGGGAAACAGCTCGCCGACCCAGGCGACTTCCTTGAGGTTCTCCGAAAGATGGGTGTGCAG
GTAGACGCCGGGATACTCGTCCAGCAGGCGCGCCGCCGCGGCCAGTTGCTCGGGCGAGGAAGTCGGCGCGAA
GCGTGGGGTGACCGCGTATTGCAGGCGCCCGTTGCCGTGCCAGCGCTCGATCAGCGCGCGGCTCTCGGCGTA
GCCGCTGGCCGCGGTATCGCACAGCGCCGGCGGCGCGTTGCGGTCCATCAGCACTTTGCCGGCGATCATCCG
CAGGCGGCGCTTCTGCGCGGCCTGGAAGAATGCCTCGGCGGATACCGCATGGACCGTGCCGAACACCAGCGC
GGTAGTGGTGCCGTGGCGCAGCAGTTCGTCGAGGAACAGCTCGGCCTGGGCGGCGGCGTAGCCGGCATCGGC
GAAGCGCTGCTCGGCGGGAAAGGTGTGGGTTTCCAGCCAGTCCAGCAGTTGGGTGCCGTAGGAGGCGATCAC
TCCGAGTTGCGGGTAATGCACATGGCAGTCGACGAAGCCGGGCAGCAGCAGGCGCTGCGGATGCTCCTCCAG
CGGCAGGTCGGCGGGCAGTTGTGGCAGCAGGTAGGCTGCGTGATCGAGCGCGCGCACGTGGCCGTGTTCGAT
CCACAGCAGGCCGTCCTCGAAATACTCCCAGGCCTTGTCGCCGAGCTTCGCCGGGTCGCCGAGGAAATGCAG
GATCCGCCCGCGATGGGCCGAACTGCTCATCGCGCTCCCGCCGTGGTCGGAGCGCAGGACAAGTGGGGGGAC
GAAGTTGCCAGCAGGTACTGCATCGTTCATCTCCTCTGCTGCCGGAACGGCGCTTTCGCCTCTTTAGTCCGG
GAAATCGCCGGAAATATCCCGTCCTTGGCACGTGATCCCGCGGTGCAGGACGGATGA